Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_C01
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   1.6  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    23   2.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.2  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.0  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 452 HLLMSFSSKTKDGCPEL 502
           HLL  F ++ KD CPE+
Sbjct: 366 HLLPLFLTQLKDECPEV 382


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 105 RITTPTTANSNYSSVINITL 46
           R   P   NS Y+S++NI L
Sbjct: 12  RQKAPKIVNSKYNSILNIAL 31


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 105 RITTPTTANSNYSSVINITL 46
           R   P   NS Y+S++NI L
Sbjct: 12  RQKAPKIVNSKYNSILNIAL 31


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 314 LXVAMANGKLFXMDIRNPDSXQEIHYSKY 400
           L   +ANG L     R  D  QE+H   Y
Sbjct: 71  LRQVLANGNLVFPPFRAEDYRQEVHAQVY 99


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 50  VMFITEL*LLFAVVGVVIRTVFSK 121
           V+F+    ++ A   V++RT++SK
Sbjct: 213 VLFVFPALIISACYAVIVRTIWSK 236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,247
Number of Sequences: 336
Number of extensions: 2877
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)