Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_C01
         (649 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0525 + 4564885-4565221,4565337-4565476,4565582-4565677,456...    38   0.007
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973...    31   0.79 
01_05_0328 + 21035231-21036931                                         29   4.2  
03_04_0066 + 17003276-17004067                                         28   7.4  
02_05_1219 + 35011571-35011897,35012008-35013780,35013915-350140...    27   9.7  

>08_01_0525 +
           4564885-4565221,4565337-4565476,4565582-4565677,
           4566079-4566146,4566542-4566643,4567492-4567630,
           4567758-4567898,4568241-4568297,4568400-4568459,
           4568866-4568973,4569834-4569994,4570453-4570531,
           4571357-4571490,4571846-4571951,4572244-4572432,
           4572595-4572822,4573028-4573183,4573491-4573532,
           4573752-4573868,4573945-4574121
          Length = 878

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 20/73 (27%), Positives = 35/73 (47%)
 Frame = +2

Query: 428 LFLDPLGCHLLMSFSSKTKDGCPELXYIHQKSSKLKFVSKIPNYEITEVGWNFENTSNNM 607
           +FLDP G H +   ++    G  E  Y H +  + K + ++ N  +  V WN +  +   
Sbjct: 58  VFLDPGGKHCV---ATVVHPGGAETYYHHARWPRPKLLPRLRNVLVNAVAWNRQTITEAS 114

Query: 608 TGXILLGTSKGHL 646
           T  ++LGT  G +
Sbjct: 115 TKEVILGTEDGQI 127


>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
            21997494-21997838,21998323-21999240,21999312-21999640,
            21999709-21999832,21999901-22000071,22000188-22001648,
            22002647-22002910,22003866-22004189
          Length = 1831

 Score = 31.1 bits (67), Expect = 0.79
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 404  QPTSKLSGLFLDPLGCHLLMSFSSKTKDG 490
            +PTS +S   + P+ CH ++  +SK KDG
Sbjct: 1448 EPTSIISYALVSPMYCHQMLDENSKNKDG 1476


>01_05_0328 + 21035231-21036931
          Length = 566

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 19/72 (26%), Positives = 38/72 (52%)
 Frame = -2

Query: 267 RFIFCFVNIGTLXSSCILMYPEDIMGSAGGFVL*EACAACLY*SNIEVILEKTVRITTPT 88
           RF F F+++GTL +  +L+Y +D +G +  + +   C+A +  + I V L  T R     
Sbjct: 174 RFFF-FISLGTLLAVTVLVYVQDHVGRSWAYGI---CSAAML-AAIAVFLSGTRRYRYKR 228

Query: 87  TANSNYSSVINI 52
           ++ S    ++ +
Sbjct: 229 SSGSPIVHILQV 240


>03_04_0066 + 17003276-17004067
          Length = 263

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +2

Query: 86  VVGVVIRTVFSKMTSILDQYKQAAQASYRTKPPAEPMISSGYINMQLEXNVP 241
           VVGV   T  SK+ + L         S+R KPP      +   N   + N+P
Sbjct: 73  VVGVAKTTHRSKLAAFLGSLVSPESTSFRKKPPPAASSETTTYNYNDDDNLP 124


>02_05_1219 +
           35011571-35011897,35012008-35013780,35013915-35014068,
           35014158-35014801
          Length = 965

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 440 PLGCHLLMSFSSKTKDGCPELXYIHQKSSKLKFVSKIPNYEITEVGWNFE 589
           PL  +LL  FS   ++G      + ++ SK KF+    N  +TE+ W  E
Sbjct: 820 PLELYLLEKFSDYQEEGTK----LRERRSKEKFLFDAVNEALTELTWTAE 865


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,789,646
Number of Sequences: 37544
Number of extensions: 263186
Number of successful extensions: 476
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)