Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_C01
         (649 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001513-1|AAH01513.1|  580|Homo sapiens VPS18 protein protein.       103   5e-22
AF308802-1|AAG34679.1|  973|Homo sapiens vacuolar protein sortin...   103   5e-22
AB040908-1|BAA95999.1|  986|Homo sapiens KIAA1475 protein protein.    103   5e-22
AF012872-1|AAD13352.1| 2044|Homo sapiens phosphatidylinositol 4-...    30   8.2  
AB210002-1|BAE06084.1| 2121|Homo sapiens PIK4CA variant protein ...    30   8.2  

>BC001513-1|AAH01513.1|  580|Homo sapiens VPS18 protein protein.
          Length = 580

 Score =  103 bits (247), Expect = 5e-22
 Identities = 57/177 (32%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
 Frame = +2

Query: 122 MTSILDQYKQAAQASYRTKP--PAEPMISSGYINMQLEXNVPMFTKQKMNLNPSDLITHA 295
           M SILD+Y+ +   S   +P  P+  +  SGY+N QLE  VP+FTKQ+++  PS+ IT  
Sbjct: 1   MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL 60

Query: 296 AVSSDNLXVAMANGKLFXMDIRNPDSXQEIHYSKYCQPTSKLSGLFLDPLGCHLLMSFSS 475
            VSS+ L +++    L  +D+   +    +   +  +  +K+  +FLD  G HLL++ SS
Sbjct: 61  VVSSNQLCMSLGKDTLLRIDLGKANEPNHVELGR--KDDAKVHKMFLDHTGSHLLIALSS 118

Query: 476 KTKDGCPELXYIHQKSSKLKFVSKIPNYEITEVGWNFENTSNNMTGXILLGTSKGHL 646
                  E+ Y+++   K++ +++     +  VGWN    + + TG IL+GT++GH+
Sbjct: 119 ------TEVLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHI 169


>AF308802-1|AAG34679.1|  973|Homo sapiens vacuolar protein sorting
           protein 18 protein.
          Length = 973

 Score =  103 bits (247), Expect = 5e-22
 Identities = 57/177 (32%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
 Frame = +2

Query: 122 MTSILDQYKQAAQASYRTKP--PAEPMISSGYINMQLEXNVPMFTKQKMNLNPSDLITHA 295
           M SILD+Y+ +   S   +P  P+  +  SGY+N QLE  VP+FTKQ+++  PS+ IT  
Sbjct: 1   MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL 60

Query: 296 AVSSDNLXVAMANGKLFXMDIRNPDSXQEIHYSKYCQPTSKLSGLFLDPLGCHLLMSFSS 475
            VSS+ L +++    L  +D+   +    +   +  +  +K+  +FLD  G HLL++ SS
Sbjct: 61  VVSSNQLCMSLGKDTLLRIDLGKANEPNHVELGR--KDDAKVHKMFLDHTGSHLLIALSS 118

Query: 476 KTKDGCPELXYIHQKSSKLKFVSKIPNYEITEVGWNFENTSNNMTGXILLGTSKGHL 646
                  E+ Y+++   K++ +++     +  VGWN    + + TG IL+GT++GH+
Sbjct: 119 ------TEVLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHI 169


>AB040908-1|BAA95999.1|  986|Homo sapiens KIAA1475 protein protein.
          Length = 986

 Score =  103 bits (247), Expect = 5e-22
 Identities = 57/177 (32%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
 Frame = +2

Query: 122 MTSILDQYKQAAQASYRTKP--PAEPMISSGYINMQLEXNVPMFTKQKMNLNPSDLITHA 295
           M SILD+Y+ +   S   +P  P+  +  SGY+N QLE  VP+FTKQ+++  PS+ IT  
Sbjct: 14  MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL 73

Query: 296 AVSSDNLXVAMANGKLFXMDIRNPDSXQEIHYSKYCQPTSKLSGLFLDPLGCHLLMSFSS 475
            VSS+ L +++    L  +D+   +    +   +  +  +K+  +FLD  G HLL++ SS
Sbjct: 74  VVSSNQLCMSLGKDTLLRIDLGKANEPNHVELGR--KDDAKVHKMFLDHTGSHLLIALSS 131

Query: 476 KTKDGCPELXYIHQKSSKLKFVSKIPNYEITEVGWNFENTSNNMTGXILLGTSKGHL 646
                  E+ Y+++   K++ +++     +  VGWN    + + TG IL+GT++GH+
Sbjct: 132 ------TEVLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHI 182


>AF012872-1|AAD13352.1| 2044|Homo sapiens phosphatidylinositol
           4-kinase 230 protein.
          Length = 2044

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 380 EIHYSKYCQPTSKLSGLFLDPLGC 451
           +I   K+CQP S L  L +D LGC
Sbjct: 581 QILQQKFCQPPSPLDVLIIDQLGC 604


>AB210002-1|BAE06084.1| 2121|Homo sapiens PIK4CA variant protein
           protein.
          Length = 2121

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 380 EIHYSKYCQPTSKLSGLFLDPLGC 451
           +I   K+CQP S L  L +D LGC
Sbjct: 658 QILQQKFCQPPSPLDVLIIDQLGC 681


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,001,527
Number of Sequences: 237096
Number of extensions: 1544214
Number of successful extensions: 2152
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2146
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)