Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_B23
(640 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019104-1|AAH19104.1| 208|Homo sapiens C8orf55 protein protein. 101 2e-21
BC001311-1|AAH01311.1| 208|Homo sapiens chromosome 8 open readi... 101 2e-21
AF242773-1|AAF65450.1| 208|Homo sapiens mesenchymal stem cell p... 101 2e-21
AK075407-1|BAC11600.1| 208|Homo sapiens protein ( Homo sapiens ... 100 4e-21
U16296-1|AAA98443.1| 1591|Homo sapiens TIAM1 protein protein. 30 6.0
BC117196-1|AAI17197.1| 1591|Homo sapiens T-cell lymphoma invasio... 30 6.0
BC117192-1|AAI17193.1| 1591|Homo sapiens T-cell lymphoma invasio... 30 6.0
AB209101-1|BAD92338.1| 1060|Homo sapiens T-cell lymphoma invasio... 30 6.0
>BC019104-1|AAH19104.1| 208|Homo sapiens C8orf55 protein protein.
Length = 208
Score = 101 bits (242), Expect = 2e-21
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 2/167 (1%)
Frame = +2
Query: 134 DVNYFLRVAFTIGIGRLFHKKC-GINDSTTIYGFCTTQDVDIFLRHMNNARYVRELXFAR 310
DV Y +R+ + RL + + G D+D+ L HMNNARY+RE FAR
Sbjct: 20 DVWYLVRLPCAVLRARLLQPRVRDLLAEQRFPGRVLPSDLDLLL-HMNNARYLREADFAR 78
Query: 311 FHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLVYWEDKTLFIEQKFI 490
R G+ ++ + H + AS R+RR++ + P++V T+L+ W+D+ ++E +F+
Sbjct: 79 VAHLTRCGVLGALRQLRAHTVLAASCARHRRSLRLLEPFEVRTRLLGWDDRAFYLEARFV 138
Query: 491 TLNDGFVRAIVLSRQNLLNVDAAALFXGIPXADXK-PECPXXIKHWL 628
+L DGFV A++ RQ+LL + + + PE P ++HW+
Sbjct: 139 SLRDGFVCALLRFRQHLLGTSPERVVQHLCQRRVEPPELPADLQHWI 185
>BC001311-1|AAH01311.1| 208|Homo sapiens chromosome 8 open reading
frame 55 protein.
Length = 208
Score = 101 bits (242), Expect = 2e-21
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 2/167 (1%)
Frame = +2
Query: 134 DVNYFLRVAFTIGIGRLFHKKC-GINDSTTIYGFCTTQDVDIFLRHMNNARYVRELXFAR 310
DV Y +R+ + RL + + G D+D+ L HMNNARY+RE FAR
Sbjct: 20 DVWYLVRLPCAVLRARLLQPRVRDLLAEQRFPGRVLPSDLDLLL-HMNNARYLREADFAR 78
Query: 311 FHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLVYWEDKTLFIEQKFI 490
R G+ ++ + H + AS R+RR++ + P++V T+L+ W+D+ ++E +F+
Sbjct: 79 VAHLTRCGVLGALRELRAHTVLAASCARHRRSLRLLEPFEVRTRLLGWDDRAFYLEARFV 138
Query: 491 TLNDGFVRAIVLSRQNLLNVDAAALFXGIPXADXK-PECPXXIKHWL 628
+L DGFV A++ RQ+LL + + + PE P ++HW+
Sbjct: 139 SLRDGFVCALLRFRQHLLGTSPERVVQHLCQRRVEPPELPADLQHWI 185
>AF242773-1|AAF65450.1| 208|Homo sapiens mesenchymal stem cell
protein DSCD75 protein.
Length = 208
Score = 101 bits (242), Expect = 2e-21
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 2/167 (1%)
Frame = +2
Query: 134 DVNYFLRVAFTIGIGRLFHKKC-GINDSTTIYGFCTTQDVDIFLRHMNNARYVRELXFAR 310
DV Y +R+ + RL + + G D+D+ L HMNNARY+RE FAR
Sbjct: 20 DVWYLVRLPCAVLRARLLQPRVRDLLAEQRFPGRVLPSDLDLLL-HMNNARYLREADFAR 78
Query: 311 FHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLVYWEDKTLFIEQKFI 490
R G+ ++ + H + AS R+RR++ + P++V T+L+ W+D+ ++E +F+
Sbjct: 79 VAHLTRCGVLGALRELRAHTVLAASCARHRRSLRLLEPFEVRTRLLGWDDRAFYLEARFV 138
Query: 491 TLNDGFVRAIVLSRQNLLNVDAAALFXGIPXADXK-PECPXXIKHWL 628
+L DGFV A++ RQ+LL + + + PE P ++HW+
Sbjct: 139 SLRDGFVCALLRFRQHLLGTSPERVVQHLCQRRVEPPELPADLQHWI 185
>AK075407-1|BAC11600.1| 208|Homo sapiens protein ( Homo sapiens
cDNA PSEC0098 fis, clone NT2RP2002695, highly similar to
Mesenchymal stem cell protein DSCD75. ).
Length = 208
Score = 100 bits (240), Expect = 4e-21
Identities = 46/129 (35%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
Frame = +2
Query: 245 DVDIFLRHMNNARYVRELXFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSP 424
D+D+ L HMNNARY+RE FAR R G+ ++ + H + AS R+RR++ + P
Sbjct: 58 DLDLLL-HMNNARYLREADFARVAHLTRCGVLGALRELRAHTVLAASCARHRRSLRLLEP 116
Query: 425 YKVETKLVYWEDKTLFIEQKFITLNDGFVRAIVLSRQNLLNVDAAALFXGIPXADXK-PE 601
++V T+L+ W+D+ ++E +F++L DGFV A++ RQ+LL + + + PE
Sbjct: 117 FEVRTRLLGWDDRAFYLEARFVSLRDGFVCALLRFRQHLLGTSPERVVQHLCQRRVEPPE 176
Query: 602 CPXXIKHWL 628
P ++HW+
Sbjct: 177 LPADLQHWI 185
>U16296-1|AAA98443.1| 1591|Homo sapiens TIAM1 protein protein.
Length = 1591
Score = 30.3 bits (65), Expect = 6.0
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -3
Query: 344 LYRYQSDRRNGISQNXIPSH-IW 279
L+ Y+SD R+GI N IP H +W
Sbjct: 474 LFFYESDGRSGIDHNSIPKHAVW 496
>BC117196-1|AAI17197.1| 1591|Homo sapiens T-cell lymphoma invasion
and metastasis 1 protein.
Length = 1591
Score = 30.3 bits (65), Expect = 6.0
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -3
Query: 344 LYRYQSDRRNGISQNXIPSH-IW 279
L+ Y+SD R+GI N IP H +W
Sbjct: 474 LFFYESDGRSGIDHNSIPKHAVW 496
>BC117192-1|AAI17193.1| 1591|Homo sapiens T-cell lymphoma invasion
and metastasis 1 protein.
Length = 1591
Score = 30.3 bits (65), Expect = 6.0
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -3
Query: 344 LYRYQSDRRNGISQNXIPSH-IW 279
L+ Y+SD R+GI N IP H +W
Sbjct: 474 LFFYESDGRSGIDHNSIPKHAVW 496
>AB209101-1|BAD92338.1| 1060|Homo sapiens T-cell lymphoma invasion
and metastasis 1 variant protein.
Length = 1060
Score = 30.3 bits (65), Expect = 6.0
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -3
Query: 344 LYRYQSDRRNGISQNXIPSH-IW 279
L+ Y+SD R+GI N IP H +W
Sbjct: 303 LFFYESDGRSGIDHNSIPKHAVW 325
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,304,416
Number of Sequences: 237096
Number of extensions: 1742032
Number of successful extensions: 2678
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2678
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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