Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_B23
         (640 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071547-1|AAL49169.1|  193|Drosophila melanogaster RE58349p pro...   239   3e-63
AE014298-840|AAF46119.1|  193|Drosophila melanogaster CG4666-PA ...   239   3e-63
AY121707-1|AAM52034.1|  301|Drosophila melanogaster RH58440p pro...   144   7e-35
AE014298-841|AAF46120.2|  261|Drosophila melanogaster CG4660-PA ...   144   7e-35

>AY071547-1|AAL49169.1|  193|Drosophila melanogaster RE58349p
           protein.
          Length = 193

 Score =  239 bits (584), Expect = 3e-63
 Identities = 101/178 (56%), Positives = 136/178 (76%)
 Frame = +2

Query: 107 IVALAYIFWDVNYFLRVAFTIGIGRLFHKKCGINDSTTIYGFCTTQDVDIFLRHMNNARY 286
           ++ + Y+ WDVNYF+R  FT+  GRLF +K  + D+TTIYG CT+QDVDIF+RHMNNARY
Sbjct: 6   VLLILYVIWDVNYFIRCVFTVFAGRLFQRKRKVTDTTTIYGLCTSQDVDIFIRHMNNARY 65

Query: 287 VRELXFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLVYWEDKT 466
           +REL FARFHFY  TG+Y  I+   G A+QGASS+RYRRTIPIF PYK++TKL++W+DK 
Sbjct: 66  LRELDFARFHFYALTGLYERIRDRRGGAVQGASSVRYRRTIPIFHPYKIQTKLIWWDDKA 125

Query: 467 LFIEQKFITLNDGFVRAIVLSRQNLLNVDAAALFXGIPXADXKPECPXXIKHWLQSIE 640
           +++EQ+FITL+DGFVRA+ +S+QN+ N +   +    P    +PE P  +K WL +IE
Sbjct: 126 IYLEQQFITLSDGFVRAVAMSKQNITNCNVLEVLKTYPETAQRPEKPEELKLWLDAIE 183


>AE014298-840|AAF46119.1|  193|Drosophila melanogaster CG4666-PA
           protein.
          Length = 193

 Score =  239 bits (584), Expect = 3e-63
 Identities = 101/178 (56%), Positives = 136/178 (76%)
 Frame = +2

Query: 107 IVALAYIFWDVNYFLRVAFTIGIGRLFHKKCGINDSTTIYGFCTTQDVDIFLRHMNNARY 286
           ++ + Y+ WDVNYF+R  FT+  GRLF +K  + D+TTIYG CT+QDVDIF+RHMNNARY
Sbjct: 6   VLLILYVIWDVNYFIRCVFTVFAGRLFQRKRKVTDTTTIYGLCTSQDVDIFIRHMNNARY 65

Query: 287 VRELXFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLVYWEDKT 466
           +REL FARFHFY  TG+Y  I+   G A+QGASS+RYRRTIPIF PYK++TKL++W+DK 
Sbjct: 66  LRELDFARFHFYALTGLYERIRDRRGGAVQGASSVRYRRTIPIFHPYKIQTKLIWWDDKA 125

Query: 467 LFIEQKFITLNDGFVRAIVLSRQNLLNVDAAALFXGIPXADXKPECPXXIKHWLQSIE 640
           +++EQ+FITL+DGFVRA+ +S+QN+ N +   +    P    +PE P  +K WL +IE
Sbjct: 126 IYLEQQFITLSDGFVRAVAMSKQNITNCNVLEVLKTYPETAQRPEKPEELKLWLDAIE 183


>AY121707-1|AAM52034.1|  301|Drosophila melanogaster RH58440p
           protein.
          Length = 301

 Score =  144 bits (350), Expect = 7e-35
 Identities = 63/156 (40%), Positives = 99/156 (63%)
 Frame = +2

Query: 98  VXTIVALAYIFWDVNYFLRVAFTIGIGRLFHKKCGINDSTTIYGFCTTQDVDIFLRHMNN 277
           V   + + Y   +++YFLR+   + + R   ++C I D+TT+ G C T DVD  L HMNN
Sbjct: 51  VLLAIIVVYGLLELHYFLRMCLCVLLARFVKRRCHILDTTTVNGLCLTNDVDTLLYHMNN 110

Query: 278 ARYVRELXFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLVYWE 457
           ARY REL FAR  FY+RT +Y  I  + G   QGA++IRYRR I  F  + + ++++YW+
Sbjct: 111 ARYFRELDFARVDFYERTNLYRTITGMGGSVFQGAATIRYRRFIRPFHRFNIISRIIYWD 170

Query: 458 DKTLFIEQKFITLNDGFVRAIVLSRQNLLNVDAAAL 565
           +++LF+E +F+  +D FV  I + RQ +++V   A+
Sbjct: 171 EQSLFMEHRFVRPSDKFVHCIAICRQRVIDVSMEAV 206


>AE014298-841|AAF46120.2|  261|Drosophila melanogaster CG4660-PA
           protein.
          Length = 261

 Score =  144 bits (350), Expect = 7e-35
 Identities = 63/156 (40%), Positives = 99/156 (63%)
 Frame = +2

Query: 98  VXTIVALAYIFWDVNYFLRVAFTIGIGRLFHKKCGINDSTTIYGFCTTQDVDIFLRHMNN 277
           V   + + Y   +++YFLR+   + + R   ++C I D+TT+ G C T DVD  L HMNN
Sbjct: 11  VLLAIIVVYGLLELHYFLRMCLCVLLARFVKRRCHILDTTTVNGLCLTNDVDTLLYHMNN 70

Query: 278 ARYVRELXFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLVYWE 457
           ARY REL FAR  FY+RT +Y  I  + G   QGA++IRYRR I  F  + + ++++YW+
Sbjct: 71  ARYFRELDFARVDFYERTNLYRTITGMGGSVFQGAATIRYRRFIRPFHRFNIISRIIYWD 130

Query: 458 DKTLFIEQKFITLNDGFVRAIVLSRQNLLNVDAAAL 565
           +++LF+E +F+  +D FV  I + RQ +++V   A+
Sbjct: 131 EQSLFMEHRFVRPSDKFVHCIAICRQRVIDVSMEAV 166


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,613,028
Number of Sequences: 53049
Number of extensions: 504842
Number of successful extensions: 984
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)