Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_B22
         (539 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69392-1|CAA49189.1|  145|Homo sapiens ribosomal protein L26 pro...   173   2e-43
CR456828-1|CAG33109.1|  145|Homo sapiens RPL26 protein.               173   2e-43
BC071664-1|AAH71664.1|  145|Homo sapiens RPL26 protein protein.       173   2e-43
BC070192-1|AAH70192.1|  145|Homo sapiens ribosomal protein L26-l...   173   2e-43
BC017360-1|AAH17360.1|  145|Homo sapiens ribosomal protein L26-l...   173   2e-43
AB061829-1|BAB79467.1|  145|Homo sapiens ribosomal protein L26 p...   173   2e-43
L07287-1|AAA60279.1|  145|Homo sapiens ribosomal protein L26 pro...   171   1e-42

>X69392-1|CAA49189.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score =  173 bits (422), Expect = 2e-43
 Identities = 80/105 (76%), Positives = 94/105 (89%)
 Frame = +1

Query: 151 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 330
           P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33  PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92

Query: 331 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKXKGKY 465
            T +VGIHPSK VI +LK++KDRK IL+R+AK R   +GK KGKY
Sbjct: 93  TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135



 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +3

Query: 84  RRKNRKRHFSAPSHIRRVLMSSPL 155
           R KNRKRHF+APSHIRR +MSSPL
Sbjct: 11  RSKNRKRHFNAPSHIRRKIMSSPL 34


>CR456828-1|CAG33109.1|  145|Homo sapiens RPL26 protein.
          Length = 145

 Score =  173 bits (422), Expect = 2e-43
 Identities = 80/105 (76%), Positives = 94/105 (89%)
 Frame = +1

Query: 151 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 330
           P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33  PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92

Query: 331 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKXKGKY 465
            T +VGIHPSK VI +LK++KDRK IL+R+AK R   +GK KGKY
Sbjct: 93  TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135



 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +3

Query: 84  RRKNRKRHFSAPSHIRRVLMSSPL 155
           R KNRKRHF+APSHIRR +MSSPL
Sbjct: 11  RSKNRKRHFNAPSHIRRKIMSSPL 34


>BC071664-1|AAH71664.1|  145|Homo sapiens RPL26 protein protein.
          Length = 145

 Score =  173 bits (422), Expect = 2e-43
 Identities = 80/105 (76%), Positives = 94/105 (89%)
 Frame = +1

Query: 151 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 330
           P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33  PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92

Query: 331 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKXKGKY 465
            T +VGIHPSK VI +LK++KDRK IL+R+AK R   +GK KGKY
Sbjct: 93  TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135



 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +3

Query: 84  RRKNRKRHFSAPSHIRRVLMSSPL 155
           R KNRKRHF+APSHIRR +MSSPL
Sbjct: 11  RSKNRKRHFNAPSHIRRKIMSSPL 34


>BC070192-1|AAH70192.1|  145|Homo sapiens ribosomal protein L26-like
           1 protein.
          Length = 145

 Score =  173 bits (422), Expect = 2e-43
 Identities = 80/105 (76%), Positives = 94/105 (89%)
 Frame = +1

Query: 151 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 330
           P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33  PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92

Query: 331 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKXKGKY 465
            T +VGIHPSK VI +LK++KDRK IL+R+AK R   +GK KGKY
Sbjct: 93  TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135



 Score = 46.4 bits (105), Expect = 6e-05
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +3

Query: 84  RRKNRKRHFSAPSHIRRVLMSSPL 155
           R KNRKRHF+APSH+RR +MSSPL
Sbjct: 11  RSKNRKRHFNAPSHVRRKIMSSPL 34


>BC017360-1|AAH17360.1|  145|Homo sapiens ribosomal protein L26-like
           1 protein.
          Length = 145

 Score =  173 bits (422), Expect = 2e-43
 Identities = 80/105 (76%), Positives = 94/105 (89%)
 Frame = +1

Query: 151 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 330
           P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33  PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92

Query: 331 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKXKGKY 465
            T +VGIHPSK VI +LK++KDRK IL+R+AK R   +GK KGKY
Sbjct: 93  TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135



 Score = 46.4 bits (105), Expect = 6e-05
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +3

Query: 84  RRKNRKRHFSAPSHIRRVLMSSPL 155
           R KNRKRHF+APSH+RR +MSSPL
Sbjct: 11  RSKNRKRHFNAPSHVRRKIMSSPL 34


>AB061829-1|BAB79467.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score =  173 bits (422), Expect = 2e-43
 Identities = 80/105 (76%), Positives = 94/105 (89%)
 Frame = +1

Query: 151 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 330
           P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33  PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92

Query: 331 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKXKGKY 465
            T +VGIHPSK VI +LK++KDRK IL+R+AK R   +GK KGKY
Sbjct: 93  TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135



 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +3

Query: 84  RRKNRKRHFSAPSHIRRVLMSSPL 155
           R KNRKRHF+APSHIRR +MSSPL
Sbjct: 11  RSKNRKRHFNAPSHIRRKIMSSPL 34


>L07287-1|AAA60279.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score =  171 bits (416), Expect = 1e-42
 Identities = 79/105 (75%), Positives = 93/105 (88%)
 Frame = +1

Query: 151 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 330
           P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33  PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92

Query: 331 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKXKGKY 465
            T +VGIHPSK VI +LK++KDRK IL+R+AK R   +GK K KY
Sbjct: 93  TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKSKY 135



 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +3

Query: 84  RRKNRKRHFSAPSHIRRVLMSSPL 155
           R KNRKRHF+APSHIRR +MSSPL
Sbjct: 11  RSKNRKRHFNAPSHIRRKIMSSPL 34


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,324,349
Number of Sequences: 237096
Number of extensions: 1414691
Number of successful extensions: 3229
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3229
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)