Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_B20
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 40 0.002
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 39 0.004
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 33 0.20
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 31 0.61
03_02_0712 - 10600147-10600196,10600257-10600378,10600993-106014... 31 0.80
09_03_0170 - 13035371-13036504 30 1.9
09_03_0169 - 13010909-13012033 30 1.9
05_03_0442 + 14040280-14040371,14040449-14040517,14041217-140413... 29 3.2
05_03_0645 + 16529635-16529794,16530188-16530312,16531100-165311... 29 4.3
08_02_0916 - 22592039-22592196,22592361-22592781 28 5.6
10_06_0184 - 11577331-11577360,11577616-11577722,11578048-115781... 28 7.5
05_03_0427 - 13886814-13887935 28 7.5
03_05_0637 - 26312348-26313004,26313507-26313575,26313799-26314071 28 7.5
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 28 7.5
07_03_0603 - 19890664-19890823,19891104-19891329,19891498-198916... 27 9.9
06_01_0622 - 4527710-4528266,4528302-4528303,4535590-4535777 27 9.9
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Frame = +1
Query: 229 ESLEWIRMITGE---PXNTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKI-NTSSMAFK 396
E +EW+ + E P ++S D E+L DGT+LC + N + P ++++ + + +
Sbjct: 19 EVIEWLNALLPEYCLPLDSSDD--ELRELLSDGTVLCHIVNALIPGVLEESWGAYASSDQ 76
Query: 397 CMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICL 519
++ FL +G+P F DL E +++ VV CL
Sbjct: 77 HAGHVKKFLAVVADMGLPG---FSVKDL-EEGSMSGVVDCL 113
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 38.7 bits (86), Expect = 0.004
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Frame = +1
Query: 226 HESLEWIR----MITGEPXNTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKI------- 372
+E+ W+R ++ G+ + F L++G +LC N + P + K+
Sbjct: 57 YEAANWLRRVVGVVCGKDLAEEPSEEEFRLGLRNGIVLCNALNKVQPGSVPKVVEAPSDS 116
Query: 373 --NTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 528
+ A++ EN+ FL + LG+P TF+ DL + VV C+ SL
Sbjct: 117 ADGAALCAYQYFENVRNFLMGLQDLGLP---TFEASDLEKGGKGVRVVDCVLSL 167
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 289 DNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 444
D+ + + KDG LLCKL N P I + INT + ++ EN L +A+ +G
Sbjct: 187 DHLFHLTKDGVLLCKLINLAVPGTIDERAINTKKLLNLWEKNENHTLCLNSAKAIG 242
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 31.5 bits (68), Expect = 0.61
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 9/126 (7%)
Frame = +1
Query: 289 DNFYEVLKDGTLLCKLANNIHPNMI--KKINTSS--MAFKCMENINAFLEAARQLGVPAQ 456
++ + +++DG LLCKL N P I + INT ++ EN L +A+ +G
Sbjct: 157 NDIFNLVRDGVLLCKLINVAVPGTIDERAINTKKDPNPWERNENHTLCLNSAKAIGCTV- 215
Query: 457 ETFQTVDLWERQ-----NLNSVVICLQSLGXKAGTYGKPSIGPKEADXNVRNFSEEQLXA 621
T DL E + L S +I +Q L P + AD N + E A
Sbjct: 216 VNIGTQDLIEARPHLVLGLLSQIIKIQLLA-DLNLKKTPQLAELVADDNSKEAEELVTLA 274
Query: 622 XDXVIL 639
D ++L
Sbjct: 275 PDKMLL 280
>03_02_0712 -
10600147-10600196,10600257-10600378,10600993-10601489,
10601663-10601851,10601936-10602099,10602193-10602446,
10602535-10602691,10602830-10602995,10603121-10603227,
10603305-10603478,10603594-10603689,10603781-10603862,
10603948-10604058,10604253-10604309,10604638-10604709,
10604799-10605041,10605195-10605341,10605381-10605616,
10605745-10605865
Length = 1014
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +1
Query: 334 LANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVI 513
+ N ++++ + AF+ EN+ FL AA+++G+P F+ DL + VV
Sbjct: 121 VVNTAADSVLQPDGAALSAFQYFENVRNFLVAAQEIGLPC---FEASDLEQGGKSARVVN 177
Query: 514 CLQSL 528
C+ +L
Sbjct: 178 CVLAL 182
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Frame = +1
Query: 184 AQRKINSKYSEELA---HESLEWIRMITG----EPXNTSGDMDNFYEVLKDGTLLCKLAN 342
+ R + S+ +EE A +E+ W+R G + F L++G +LC N
Sbjct: 28 SDRDLASRRAEEAAARRNEAAGWLRRTVGAVAARDLPEEPSEEEFRLGLRNGQILCGALN 87
Query: 343 NIHPNMIKK 369
+HP + K
Sbjct: 88 RVHPGAVPK 96
>09_03_0170 - 13035371-13036504
Length = 377
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2
Query: 284 SPEVFXGSPVIIRIHSKDSWASSSLYLLLIFLWASAANPDLVAR 153
S VF GS + +K +W + ++L + W + DLVAR
Sbjct: 278 SQTVFTGSLTTMMKKTKFNWMQNMIFLPRFYQWPETVHVDLVAR 321
>09_03_0169 - 13010909-13012033
Length = 374
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 275 VFXGSPVIIRIHSKDSWASSSLYLLLIFLWASAANPDLVAR 153
+F GS + SK W + ++L + W + DLVAR
Sbjct: 278 IFTGSLTTMMKRSKFKWMQNMIFLPRFYKWPETVHVDLVAR 318
>05_03_0442 +
14040280-14040371,14040449-14040517,14041217-14041329,
14043110-14043209,14044508-14044682,14044768-14044881,
14045157-14045287,14048401-14048464,14048585-14048624,
14049002-14049225,14049634-14049876,14050145-14050313,
14050569-14050873,14051325-14051511,14051622-14051775,
14052145-14052207,14052300-14052396,14052500-14052589
Length = 809
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 513 DHDGVEILSLPQVDSLKSFLRRYTQLSCG 427
DH G+EI+ D+ K +L+ Y CG
Sbjct: 146 DHMGMEIIETGNPDAFKQYLQEYENTICG 174
>05_03_0645 +
16529635-16529794,16530188-16530312,16531100-16531173,
16531961-16532006,16532638-16532730,16534429-16535886
Length = 651
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +3
Query: 54 ACLHSVHSDFTFYRVCDLFK*FIKLLLVRHGKQPSHQIRIC 176
A + S+HS T + VC + ++ + V + K+ ++ C
Sbjct: 26 AIIGSMHSSMTLFSVCKILSLYVDMCFVDYSKEVHSYLKYC 66
>08_02_0916 - 22592039-22592196,22592361-22592781
Length = 192
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 158 PPNQDLQLKPRERSTANTAKSWPTSPW 238
P + + L+ R+R+T+ TA++W PW
Sbjct: 22 PCGRPVVLRSRQRATSLTARNWCRRPW 48
>10_06_0184 -
11577331-11577360,11577616-11577722,11578048-11578126,
11578213-11578299,11580935-11581207,11581298-11581447,
11582186-11582785
Length = 441
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 175 AAEAQRKINSKYSEELAHESLEWIRMITGEPXNTSGDMD 291
A + +RK+NS + EEL ++M+TGE + D D
Sbjct: 248 ARKCRRKLNSVFREELERRK---VKMVTGEGGDDDDDGD 283
>05_03_0427 - 13886814-13887935
Length = 373
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 353 GWMLLASLHRRVPSLSTS*KLSISPEVFXGSPVIIRI 243
GW+ L LHR SL K +SP + V+ RI
Sbjct: 209 GWVWLKLLHRSAASLGVHSKTKLSPRFYGPYQVLGRI 245
>03_05_0637 - 26312348-26313004,26313507-26313575,26313799-26314071
Length = 332
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 248 RIHSKDSWASSSLYLLLIFLWASAANPDLVARL 150
RIH + W +YLL W SAA DLV L
Sbjct: 67 RIHRQQPW-KHRIYLLWAAEWRSAAKEDLVFAL 98
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 289 DNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 444
+ +++++DG LLCKL N P I + IN + ++ EN L +A+ +G
Sbjct: 160 NQLFDLVRDGVLLCKLINLAVPGTIDERAINKKRVLNPWERNENHTLCLNSAKAIG 215
>07_03_0603 -
19890664-19890823,19891104-19891329,19891498-19891636,
19891849-19891942,19892291-19892311,19892506-19892941,
19893133-19893280,19893369-19893476,19893543-19893659,
19893960-19894016,19894488-19894553,19895140-19895328,
19895410-19895523,19895684-19895766,19895857-19896322,
19896832-19897476
Length = 1022
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +1
Query: 292 NFYEVLKDGTLLCKLANNIHPN---MIKKINTSSMAFKCMENINAFLEAARQLGVPAQE 459
N +E L+DG +LC++ + + ++K I S K + N ++ +Q G P +
Sbjct: 410 NLFEDLQDGIILCRIIQLLTSDASIILKVIAPSDTYKKRLHNCTMAIQYIKQAGFPLSD 468
>06_01_0622 - 4527710-4528266,4528302-4528303,4535590-4535777
Length = 248
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 185 PRERSTANTAKSWPTSPWNGFG*SPANXRTP 277
PR+R++ +TA + T PW +G + + TP
Sbjct: 212 PRDRTSPDTASTSSTPPWPEYGLAGSMCSTP 242
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,579,924
Number of Sequences: 37544
Number of extensions: 396609
Number of successful extensions: 1028
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -