Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_B20
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 166 1e-41
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 166 1e-41
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 130 1e-30
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 108 3e-24
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 90 1e-18
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 46 2e-05
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 46 2e-05
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 46 2e-05
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U42844-6|AAB53814.1| 344|Caenorhabditis elegans Hypothetical pr... 29 3.8
AC084153-10|AAK84591.1| 184|Caenorhabditis elegans Hypothetical... 29 3.8
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 27 8.8
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 27 8.8
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ... 27 8.8
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 27 8.8
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 166 bits (403), Expect = 1e-41
Identities = 85/171 (49%), Positives = 119/171 (69%), Gaps = 1/171 (0%)
Frame = +1
Query: 145 ANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPXNTSGDMDNFYEVLKDGTL 324
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ +T GD DN +V +DG+L
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSL 65
Query: 325 LCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNS 504
LC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V E FQTVDL+E Q+ N+
Sbjct: 66 LCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNA 124
Query: 505 VVICLQSLGXKA-GTYGKPSIGPKEADXNVRNFSEEQLXAXDXVILXLQYG 654
V+ICL SL K+ +G+ +GPKEA + R +++EQL A VI LQ G
Sbjct: 125 VLICLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVI-GLQMG 174
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 166 bits (403), Expect = 1e-41
Identities = 85/171 (49%), Positives = 119/171 (69%), Gaps = 1/171 (0%)
Frame = +1
Query: 145 ANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPXNTSGDMDNFYEVLKDGTL 324
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ +T GD DN +V +DG+L
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSL 65
Query: 325 LCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNS 504
LC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V E FQTVDL+E Q+ N+
Sbjct: 66 LCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNA 124
Query: 505 VVICLQSLGXKA-GTYGKPSIGPKEADXNVRNFSEEQLXAXDXVILXLQYG 654
V+ICL SL K+ +G+ +GPKEA + R +++EQL A VI LQ G
Sbjct: 125 VLICLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVI-GLQMG 174
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 130 bits (313), Expect = 1e-30
Identities = 65/135 (48%), Positives = 88/135 (65%)
Frame = +1
Query: 151 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPXNTSGDMDNFYEVLKDGTLLC 330
NR T G ++K +SK+ ++ A LEWI+ ++GE +TSG+ DNF+ +LKDGTLLC
Sbjct: 3 NRTTAGGIGFAVRQKQDSKFIDKEATLLLEWIKKLSGENISTSGERDNFHNLLKDGTLLC 62
Query: 331 KLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVV 510
K AN I IKK+ F CMENINAF+E A++ GVP +ETFQ+V+L E ++L SV
Sbjct: 63 KAANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEETFQSVELVEGRDLFSVC 122
Query: 511 ICLQSLGXKAGTYGK 555
+ L SLG GK
Sbjct: 123 VTLLSLGRVLQKAGK 137
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 108 bits (260), Expect = 3e-24
Identities = 60/134 (44%), Positives = 76/134 (56%)
Frame = +1
Query: 151 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPXNTSGDMDNFYEVLKDGTLLC 330
+R +G A K SK+++ A LEWIR +T E + DNF E LKDG LC
Sbjct: 6 HRPRPAGMAGAILDKQASKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLC 65
Query: 331 KLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVV 510
KL N I +KKI F C+ENIN F AAR LGV +ETFQ+VDL++ ++L SV
Sbjct: 66 KLVNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQSVDLFDGRDLFSVT 125
Query: 511 ICLQSLGXKAGTYG 552
+ LQSL K G
Sbjct: 126 VTLQSLARKVEKLG 139
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 90.2 bits (214), Expect = 1e-18
Identities = 63/177 (35%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Frame = +1
Query: 151 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPXN----TSGDMDNFYEVLKDG 318
N G + E Q+K ++++ E A E L+WI +TGE + T + +LKDG
Sbjct: 3 NHGPSYGLSRELQKKNDARFVLEEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKDG 62
Query: 319 TLLCKLANNIHPNMIKKINTS-SMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQN 495
+LCKL + P+ N MAF MENI+ FL AA+Q GV FQTVDL+E +
Sbjct: 63 VMLCKLIEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDLYENKQ 122
Query: 496 LNSVVICLQSLGXKAGTYGK----PSIGPKEADXNVRNFSEEQLXAXDXVILXLQYG 654
V+ CL+ L A + P+ K A + R F E + + VI LQYG
Sbjct: 123 CYKVIECLRLLAAVAQSRSSHLEHPAWVVKLAQSSPRQFPEAVMRRGEMVI-PLQYG 178
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +1
Query: 241 WIRMITGEPXNTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMEN 408
W+R + + +G M F VL+DG LLC+LAN + PN I KKI ++ F C N
Sbjct: 14 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 73
Query: 409 INAF-LEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 528
IN F + + + F DL+ V+ L L
Sbjct: 74 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 114
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +1
Query: 241 WIRMITGEPXNTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMEN 408
W+R + + +G M F VL+DG LLC+LAN + PN I KKI ++ F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 409 INAF-LEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 528
IN F + + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +1
Query: 241 WIRMITGEPXNTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMEN 408
W+R + + +G M F VL+DG LLC+LAN + PN I KKI ++ F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 409 INAF-LEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 528
IN F + + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +1
Query: 280 GDMDNFYEVLKDGTLLCKLANNIHPNMIKKINT--SSMA-FKCMENINAFLEAARQLGVP 450
GD+ +F L DG LCK N +HP I ++ SS+A + N++ FL+ R++GVP
Sbjct: 540 GDI-SFSLQLSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVP 598
Query: 451 AQETFQTVDLWERQNLNSV 507
+D+ ++N V
Sbjct: 599 ETTLCSQMDIISKRNPQKV 617
>U42844-6|AAB53814.1| 344|Caenorhabditis elegans Hypothetical
protein C08A9.6 protein.
Length = 344
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 270 EHLRGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRK 434
EHL + S + +S PP+ D QHI G QVH + ++P K
Sbjct: 244 EHLPDSSAKIYSTNIKSASCAPESTEPPKSDNSAQHI--GEQVHRLFAQYPERSK 296
>AC084153-10|AAK84591.1| 184|Caenorhabditis elegans Hypothetical
protein Y22D7AL.2 protein.
Length = 184
Score = 28.7 bits (61), Expect = 3.8
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = -2
Query: 593 RTXLSASFGPIDGFP*VPAFXPSDCKQITTELRFCLSHRSTV*KVSCAGTPNCLAASRKA 414
RT + SF G P V A S + T LR +H++T +C GTPN AAS+
Sbjct: 88 RTHQTTSFTSNCGTPNVSA--ASKQPPLHTSLR---THQTTSFTSNC-GTPNVSAASKNN 141
Query: 413 LIFSMH 396
+F++H
Sbjct: 142 HLFTLH 147
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 300 RSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRKTVGCTGAGNFSNCRP 479
R A R+ + + + PP + D GE+Q P SR T + + + P
Sbjct: 473 RPADRQSAVIPTLRGKPPAVPDSQRSGYDSSGNVGEHQSRPSSRTTSSSQRSSDAHSEEP 532
Query: 480 VGETESQLRR--DLLAVTG 530
+G S RR + +TG
Sbjct: 533 IGRNSSGARRAPEAFTITG 551
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 300 RSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRKTVGCTGAGNFSNCRP 479
R A R+ + + + PP + D GE+Q P SR T + + + P
Sbjct: 473 RPADRQSAVIPTLRGKPPAVPDSQRSGYDSSGNVGEHQSRPSSRTTSSSQRSSDAHSEEP 532
Query: 480 VGETESQLRR--DLLAVTG 530
+G S RR + +TG
Sbjct: 533 IGRNSSGARRAPEAFTITG 551
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 262 EPXNTSGDMDNFYEVLKDGTLLCKL 336
E ++SG +++ +E ++DG LLC L
Sbjct: 38 EEHSSSGRIEDLFEDIRDGVLLCHL 62
>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
protein C33E10.6 protein.
Length = 1014
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 6 SHIDPRCDSDVSVDPPACLHSVHSDFTFY 92
+ I C +V ++ P +H +H+DF FY
Sbjct: 664 NEIGKGCILEVDLEYPKDIHDLHNDFPFY 692
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 262 EPXNTSGDMDNFYEVLKDGTLLCKL 336
E ++SG +++ +E ++DG LLC L
Sbjct: 38 EEHSSSGRIEDLFEDIRDGVLLCHL 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,382,005
Number of Sequences: 27780
Number of extensions: 330932
Number of successful extensions: 902
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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