Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_B17
(553 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117; Eukar... 136 2e-31
UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27; Euka... 128 8e-29
UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=... 113 2e-24
UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole gen... 106 3e-22
UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillar... 106 4e-22
UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal ... 103 2e-21
UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17; ... 82 7e-15
UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19; ... 79 9e-14
UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2; A... 78 2e-13
UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13 prot... 75 1e-12
UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=... 75 1e-12
UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7; A... 72 1e-11
UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1; Encepha... 72 1e-11
UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1; Cenar... 70 4e-11
UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1; Can... 66 5e-10
UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4; T... 59 8e-08
UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultu... 56 4e-07
UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6; H... 49 6e-05
UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 - R... 38 0.12
UniRef50_UPI00006A201E Cluster: UPI00006A201E related cluster; n... 36 0.83
UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic D-r... 36 0.83
UniRef50_A5NX10 Cluster: Molybdopterin-guanine dinucleotide bios... 33 3.3
UniRef50_A5DK33 Cluster: Putative uncharacterized protein; n=1; ... 33 3.3
UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7; E... 33 4.4
UniRef50_Q4T049 Cluster: Xylose isomerase; n=4; Deuterostomia|Re... 33 5.8
UniRef50_Q8G0I1 Cluster: Putative uncharacterized protein; n=3; ... 33 5.8
UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2; C... 32 7.7
>UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117;
Eukaryota|Rep: 40S ribosomal protein S13 - Homo sapiens
(Human)
Length = 151
Score = 136 bits (330), Expect = 2e-31
Identities = 62/72 (86%), Positives = 68/72 (94%)
Frame = +3
Query: 291 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXS 470
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ SRIHRLARYYKT
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 471 VLPPNWKYESST 506
VLPPNWKYESST
Sbjct: 134 VLPPNWKYESST 145
Score = 119 bits (287), Expect = 4e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +2
Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
>UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27;
Eukaryota|Rep: 40S ribosomal protein S13-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 151
Score = 128 bits (309), Expect = 8e-29
Identities = 61/86 (70%), Positives = 70/86 (81%)
Frame = +3
Query: 249 LPK*DS*LAKRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVX 428
+P+ S + I+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILV
Sbjct: 60 IPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVE 119
Query: 429 SRIHRLARYYKTXSVLPPNWKYESST 506
SRIHRLARYYK LPP WKYES+T
Sbjct: 120 SRIHRLARYYKKTKKLPPVWKYESTT 145
Score = 92.7 bits (220), Expect = 5e-18
Identities = 43/60 (71%), Positives = 48/60 (80%)
Frame = +2
Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
SALPY+RS P+WLK T DV E I K KKGLTPSQIGV+LRDSHG+ QV+ VTG KILR
Sbjct: 14 SALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILR 73
>UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=39;
Eukaryota|Rep: 40S ribosomal protein S13, putative -
Leishmania major
Length = 151
Score = 113 bits (273), Expect = 2e-24
Identities = 50/72 (69%), Positives = 60/72 (83%)
Frame = +3
Query: 291 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXS 470
I+K GLAP++PEDLY+L+K+A MRKHLER+ D+D+K+RLILV SRIHRLARYYK
Sbjct: 74 ILKHNGLAPEIPEDLYFLVKRATQMRKHLERHTTDRDTKYRLILVESRIHRLARYYKRVK 133
Query: 471 VLPPNWKYESST 506
LPP WKYESST
Sbjct: 134 QLPPTWKYESST 145
Score = 78.2 bits (184), Expect = 1e-13
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +2
Query: 95 RVSPXSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTG 274
R SALPYRR+ P WLK+ + +V + + K +KG+ PSQIG+ LRDS G+AQV+ VTG
Sbjct: 9 RGKASSALPYRRTPPAWLKIASRNVVKMVCKSSRKGMMPSQIGMELRDSMGIAQVKNVTG 68
Query: 275 KKILR 289
+KILR
Sbjct: 69 RKILR 73
>UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_187, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 129
Score = 106 bits (255), Expect = 3e-22
Identities = 48/61 (78%), Positives = 54/61 (88%)
Frame = +3
Query: 309 LAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXSVLPPNW 488
L P++PEDLY+LIKKAVA+RKHLER+RKDKDSKFRLI+V SRIHRLARYYK LPP W
Sbjct: 69 LGPEIPEDLYHLIKKAVAIRKHLERSRKDKDSKFRLIVVESRIHRLARYYKRTKKLPPVW 128
Query: 489 K 491
K
Sbjct: 129 K 129
>UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillardia
theta|Rep: 40S ribosomal protein S13 - Guillardia theta
(Cryptomonas phi)
Length = 147
Score = 106 bits (254), Expect = 4e-22
Identities = 45/71 (63%), Positives = 60/71 (84%)
Frame = +3
Query: 291 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXS 470
I+K GL P++PEDL++LIKKA+ ++KHLERN+KDKDSKFRLIL S+IHRL+RYYK
Sbjct: 71 ILKKNGLNPEIPEDLFFLIKKAINIKKHLERNKKDKDSKFRLILTESKIHRLSRYYKRIQ 130
Query: 471 VLPPNWKYESS 503
+P NW+++SS
Sbjct: 131 RIPINWRFDSS 141
Score = 60.1 bits (139), Expect = 3e-08
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +2
Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
S +P+ R+ P W+K + + + E I L KKGL PSQIG LRDS G+ V+ + G+ I++
Sbjct: 11 SLIPFERNAPLWVKDSKEKINEIICNLAKKGLVPSQIGSYLRDSAGIPLVKNIAGRNIVK 70
>UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal
protein S13; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S13 - Rattus norvegicus
Length = 131
Score = 103 bits (248), Expect = 2e-21
Identities = 49/65 (75%), Positives = 55/65 (84%)
Frame = +3
Query: 306 GLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXSVLPPN 485
GLA DLP DLY+LIKKAVA++KHLERNRKDKD+KF L L SRIH LARY KT +LPP+
Sbjct: 59 GLALDLPGDLYHLIKKAVAVQKHLERNRKDKDAKFCLSLTESRIHPLARYCKTKRMLPPS 118
Query: 486 WKYES 500
WKYES
Sbjct: 119 WKYES 123
Score = 79.4 bits (187), Expect = 5e-14
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = +2
Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVA 253
S LPY SV WLK T+DD+KEQIYKL KKGLTPSQIGV LRD+HG+A
Sbjct: 14 SVLPYHHSVLMWLKSTSDDMKEQIYKLAKKGLTPSQIGVTLRDTHGLA 61
>UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17;
Euryarchaeota|Rep: 30S ribosomal protein S15P/S13e -
Methanococcus jannaschii
Length = 153
Score = 82.2 bits (194), Expect = 7e-15
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = +3
Query: 276 KRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARY 455
K+ S IMK GL P +PEDL L+++AV +RKHLE++ KD SK L L+ S+I RL +Y
Sbjct: 69 KKISKIMKEHGLYPKVPEDLLNLMRRAVNLRKHLEQHPKDLHSKRGLQLIESKIRRLVKY 128
Query: 456 YKTXSVLPPNWKYESST 506
YK+ VLP +W+Y T
Sbjct: 129 YKSKGVLPADWRYTPET 145
Score = 62.5 bits (145), Expect = 6e-09
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +2
Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 283
S P R+ VP W++ T + V++ + +L KKG +QIG++LRD++G+ V+ +TGKKI
Sbjct: 14 SKRPVRKEVPEWVQYTPEQVEQLVVELAKKGYQSAQIGLILRDTYGIPDVKLITGKKI 71
>UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Pyrococcus abyssi
Length = 158
Score = 78.6 bits (185), Expect = 9e-14
Identities = 35/69 (50%), Positives = 50/69 (72%)
Frame = +3
Query: 291 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXS 470
I++ GLAP++PEDL +LIK+AV +RKHLE++ KD S L L+ S+I RL +YYK
Sbjct: 81 ILEKHGLAPEIPEDLMFLIKRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKG 140
Query: 471 VLPPNWKYE 497
LP +W+Y+
Sbjct: 141 KLPKDWRYD 149
Score = 46.8 bits (106), Expect = 3e-04
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +2
Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVR 262
S P R + P WL+ T +D++ + KL K+G + + IG +LRD +G+ V+
Sbjct: 14 SKRPPRTAPPIWLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGIPTVK 64
>UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Nanoarchaeum equitans
Length = 154
Score = 77.8 bits (183), Expect = 2e-13
Identities = 34/75 (45%), Positives = 48/75 (64%)
Frame = +3
Query: 270 LAKRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLA 449
+ K ++ GL PD+P DL YL+K+A + KH+E N +D +K L+ S+IHRLA
Sbjct: 69 IGKSLQDFLEEKGLLPDIPWDLIYLLKRAYRVYKHIELNPRDTQAKRNYQLIISKIHRLA 128
Query: 450 RYYKTXSVLPPNWKY 494
+YYK VLP +WKY
Sbjct: 129 KYYKRKGVLPKDWKY 143
Score = 49.6 bits (113), Expect = 5e-05
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +2
Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
S P R + P W + V+ +I +L K+G +P+ IG++LRD +G+ VR GK +
Sbjct: 16 SKRPLRTTKPEWAPYDKEFVENKIIELAKQGYSPAMIGLILRDQYGIPDVRLYIGKSLQD 75
Query: 290 YHE 298
+ E
Sbjct: 76 FLE 78
>UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13
protein; n=2; Pan troglodytes|Rep: PREDICTED: similar to
Rps13 protein - Pan troglodytes
Length = 269
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +2
Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRD 238
SAL Y SVPTWLKLT+D+VKEQIYKL KKGLTP QIGV+LRD
Sbjct: 227 SALLYHHSVPTWLKLTSDNVKEQIYKLTKKGLTPPQIGVILRD 269
>UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=1;
Bigelowiella natans|Rep: Small subunit ribosomal protein
S13 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 183
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/73 (47%), Positives = 49/73 (67%)
Frame = +3
Query: 285 SAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKT 464
S I++ GL P +PEDL+YLIKKA ++ HL + D +++ L L+ S I+RL+RYYK
Sbjct: 73 SKILRLKGLVPLVPEDLFYLIKKANKIKAHLSDFKHDLANRYHLNLIESHIYRLSRYYKR 132
Query: 465 XSVLPPNWKYESS 503
LP NWKY S+
Sbjct: 133 IFRLPKNWKYISN 145
Score = 38.3 bits (85), Expect = 0.12
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKG-LTPSQIGVMLRDSHGVAQVRFVTGKKI 283
+ +PYR+ W LT+ ++ + I L K L PS+IG++LRD V R ++G I
Sbjct: 14 TTVPYRKYSCEWKGLTSQNLIKIIANLAKNNNLPPSKIGLVLRDEKLVVDTRNISGMNI 72
>UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Archaeoglobus fulgidus
Length = 152
Score = 71.7 bits (168), Expect = 1e-11
Identities = 35/73 (47%), Positives = 48/73 (65%)
Frame = +3
Query: 276 KRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARY 455
K+ I+K G+ PEDL LIKKA+ +R HLE +RKDK ++ L L+ ++I RL+ Y
Sbjct: 69 KKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEAKIWRLSSY 128
Query: 456 YKTXSVLPPNWKY 494
YK VLP +WKY
Sbjct: 129 YKEKGVLPADWKY 141
Score = 56.4 bits (130), Expect = 4e-07
Identities = 23/54 (42%), Positives = 39/54 (72%)
Frame = +2
Query: 122 YRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 283
YR S P W+ ++ ++V++++ +L +G PS IG++LRD +G+ V+ VTGKKI
Sbjct: 18 YRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGIPSVKQVTGKKI 71
>UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S13
- Encephalitozoon cuniculi
Length = 148
Score = 71.7 bits (168), Expect = 1e-11
Identities = 32/74 (43%), Positives = 47/74 (63%)
Frame = +3
Query: 270 LAKRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLA 449
L + + ++ G+ P +P DL L+ +A +R HL RKD +K+RLILV SR++R+A
Sbjct: 67 LGESITRFLQRNGVVPKIPHDLESLVHRANTLRSHLNIYRKDNSAKYRLILVSSRMYRVA 126
Query: 450 RYYKTXSVLPPNWK 491
RYYK +P NWK
Sbjct: 127 RYYKRKMRIPGNWK 140
Score = 55.6 bits (128), Expect = 7e-07
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +2
Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
S PY + PTWL + D++K + ++G KG+ IG LRD +G+ + V G+ I R
Sbjct: 14 SVKPYATAFPTWLTKSVDEIKSDVIQMGNKGVPAPDIGTRLRDEYGIGKASDVLGESITR 73
Query: 290 Y 292
+
Sbjct: 74 F 74
>UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein S15P/S13E -
Cenarchaeum symbiosum
Length = 148
Score = 69.7 bits (163), Expect = 4e-11
Identities = 30/75 (40%), Positives = 49/75 (65%)
Frame = +3
Query: 276 KRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARY 455
K + IM+ G P+LPEDL +++KAV +++HL N+ D+ + L L+ +++HRL Y
Sbjct: 68 KSVTQIMEEHGATPELPEDLNNIVQKAVGLQRHLRANKGDRRNVRSLELIEAKVHRLDVY 127
Query: 456 YKTXSVLPPNWKYES 500
YK +P +WKY+S
Sbjct: 128 YKRIGRIPKDWKYKS 142
Score = 48.8 bits (111), Expect = 8e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
S P P+W++ +V++ I K K+GL PSQIG LRD H + R +TGK + +
Sbjct: 14 SIRPSSPKAPSWIQ-GPGEVEDLIVKYAKEGLAPSQIGSKLRDQHAIPLTRPITGKSVTQ 72
Query: 290 YHE 298
E
Sbjct: 73 IME 75
>UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Ribosomal
S13S15-like protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 149
Score = 66.1 bits (154), Expect = 5e-10
Identities = 28/75 (37%), Positives = 48/75 (64%)
Frame = +3
Query: 276 KRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARY 455
K I++ L ++PEDL ++KKAV +++HL+ N+ D+ + L L+ +++HRL+ Y
Sbjct: 69 KTIGEILEENDLKAEMPEDLENIVKKAVGLQRHLKENKGDRRNVRSLELIEAKVHRLSVY 128
Query: 456 YKTXSVLPPNWKYES 500
YK +P WKY+S
Sbjct: 129 YKKIGRIPATWKYKS 143
Score = 51.6 bits (118), Expect = 1e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +2
Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 283
S P P+W+ + +++E + K K GLTPSQIG+ LRD H + ++ +T K I
Sbjct: 14 SIRPATLRAPSWITQSPAEIEELVIKYSKDGLTPSQIGIKLRDQHSIPLIKPITKKTI 71
>UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S15P/S13e -
Picrophilus torridus
Length = 146
Score = 58.8 bits (136), Expect = 8e-08
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +3
Query: 291 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXS 470
++K L D+PEDL LI++ KHL N+ D ++K + L+ S++ RL RYYK S
Sbjct: 74 VLKENNLESDVPEDLQALIERYKRAMKHLSLNKHDMNNKRKAQLIMSKMLRLIRYYKRTS 133
Query: 471 VLPPNWKYE 497
LP +W E
Sbjct: 134 RLPQDWSLE 142
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +2
Query: 128 RSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 283
R P+W++ + D++KE I K+ K+G+T S IG+ LRD + + R V K+
Sbjct: 20 RERPSWIQYSDDEIKEMIVKMRKQGMTKSMIGIRLRDQYAIPGTRPVLHMKL 71
>UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultured
marine group II euryarchaeote 37F11|Rep: 30S ribosomal
protein S15 - uncultured marine group II euryarchaeote
37F11
Length = 151
Score = 56.4 bits (130), Expect = 4e-07
Identities = 28/76 (36%), Positives = 43/76 (56%)
Frame = +3
Query: 270 LAKRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLA 449
L KR A++ + PEDL L+++AVA+ +HL N +D +K L L ++I RL
Sbjct: 67 LGKRIGAVLSENDESGTYPEDLMNLMRQAVAIIEHLTTNSRDLHNKRSLELTEAKIRRLG 126
Query: 450 RYYKTXSVLPPNWKYE 497
YYK L +W+Y+
Sbjct: 127 NYYKAEGRLDSDWRYK 142
Score = 50.0 bits (114), Expect = 4e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 283
S+ P+ P W A +++ I + K G++ +QIG +LRD H V VR V GK+I
Sbjct: 14 SSKPFMTEAPEWSNKDAKEIESLILQYFKDGMSTAQIGTILRDKHAVPNVRLVLGKRI 71
>UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S15P/S13e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 156
Score = 49.2 bits (112), Expect = 6e-05
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = +3
Query: 276 KRSSAIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARY 455
K+ + I++ PDLPEDL L+++AV +R H++ N D +K L S+I RL Y
Sbjct: 73 KKVTEILEENEAEPDLPEDLRNLLERAVRLRDHMDENPGDYQNKRALQNTQSKIRRLIDY 132
Query: 456 YKTXSV 473
Y+ V
Sbjct: 133 YRGDEV 138
Score = 38.3 bits (85), Expect = 0.12
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +2
Query: 95 RVSPXSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDS--HG--VAQVR 262
R S S P P W + D ++ ++ +L ++G +PS+IG+ LRD G + V
Sbjct: 9 RGSSDSDKPAADEPPEWSDVDEDAIEARVVELAEQGHSPSEIGLKLRDEGVQGTPIPDVS 68
Query: 263 FVTGKKI 283
TGKK+
Sbjct: 69 LATGKKV 75
>UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 -
Rattus norvegicus (Rat)
Length = 481
Score = 38.3 bits (85), Expect = 0.12
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 110 SALPYRRSVPTWLKLTADDVK 172
SALPYRRSV WLKL +DDVK
Sbjct: 457 SALPYRRSVLMWLKLMSDDVK 477
>UniRef50_UPI00006A201E Cluster: UPI00006A201E related cluster; n=3;
Xenopus tropicalis|Rep: UPI00006A201E UniRef100 entry -
Xenopus tropicalis
Length = 332
Score = 35.5 bits (78), Expect = 0.83
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 131 CGGKAAP--XWEIPLARSVHTTHVCGFLLNRRSDNDNKRNQKDGC 3
CGG+ W++PL R H+ C ++ R + D K NQ C
Sbjct: 59 CGGELEKWERWDVPLTRHQHSFPHCPYMQKLRDEGDGKENQSKVC 103
>UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic
D-ribose-binding protein; n=4; Rhizobiales|Rep: Ribose
ABC transporter, periplasmic D-ribose-binding protein -
Brucella suis
Length = 355
Score = 35.5 bits (78), Expect = 0.83
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +2
Query: 131 SVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVR 262
+VPTW+K T D + +++ +L K+GL +M+ D+ G AQ +
Sbjct: 57 AVPTWMKQTEDTIVDEVAQLKKEGLVKD---LMITDAQGNAQTQ 97
>UniRef50_A5NX10 Cluster: Molybdopterin-guanine dinucleotide
biosynthesis protein A; n=4; Alphaproteobacteria|Rep:
Molybdopterin-guanine dinucleotide biosynthesis protein
A - Methylobacterium sp. 4-46
Length = 175
Score = 33.5 bits (73), Expect = 3.3
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 32 RCQIGDLV-KSRKHGSYA-RSWLRVSPXSALPYRRSVPTWLKLTADDVKEQIY 184
R ++G +V K R G +A +WL P +ALP R P W +L A + +E Y
Sbjct: 14 RYEVGVIVAKRRLKGPWASHAWL---PVAALPGRPETPPWTRLGASEAEETFY 63
>UniRef50_A5DK33 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1160
Score = 33.5 bits (73), Expect = 3.3
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 68 HGSYARSWLRVSPXSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLR-DSH 244
HG Y+ V P LP RS+PTW A ++ + + G+ + S I L SH
Sbjct: 178 HGEYSFYENHVRPLYLLPAYRSLPTWADTLATTIQFTLSRKGEIQVNISSISRFLTGSSH 237
Query: 245 GVAQVRFV 268
+ Q R +
Sbjct: 238 SLKQKRLL 245
>UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7;
Eurotiomycetidae|Rep: Ribosomal protein S15, putative -
Aspergillus clavatus
Length = 306
Score = 33.1 bits (72), Expect = 4.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 342 LIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXSVLPPNWKY 494
L K + + +HL+ KDK +K L L+ + +L RY + P W++
Sbjct: 238 LTAKIINLSRHLQSTNKDKHNKRNLRLLVHKRQKLLRYLRKKERGGPRWQH 288
>UniRef50_Q4T049 Cluster: Xylose isomerase; n=4; Deuterostomia|Rep:
Xylose isomerase - Tetraodon nigroviridis (Green puffer)
Length = 414
Score = 32.7 bits (71), Expect = 5.8
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +1
Query: 70 WVVCTLLAKGISQXGAALPPQCPYLVEIDCRRCKGTNLQTWKEGSHSLTNWCNAEGF 240
WV C L A GAA P C L + KG ++ K G+ + W EGF
Sbjct: 117 WVTCNLFAHPRYMNGAATNPDCHVLAFAGAQVKKGLDVAR-KLGAENFVFWGGREGF 172
>UniRef50_Q8G0I1 Cluster: Putative uncharacterized protein; n=3;
Brucella|Rep: Putative uncharacterized protein -
Brucella suis
Length = 276
Score = 32.7 bits (71), Expect = 5.8
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +2
Query: 134 VPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQV 259
+PTWL L ++ Y+L K +TP+ IG+ + + G++++
Sbjct: 149 LPTWLGLRRGKLRPLYYRLIHKEVTPASIGITVFGNDGISRL 190
>UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2;
Cryptosporidium|Rep: 3CCCH domain containing protein -
Cryptosporidium parvum Iowa II
Length = 591
Score = 32.3 bits (70), Expect = 7.7
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 140 TWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
T L++T D K + + K G+ GV+ R +HG A++R T K +LR
Sbjct: 154 TELRVTNDFYKTSVCRYWKMGVK-CDAGVLCRHAHGEAELRKKTNKHLLR 202
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,433,070
Number of Sequences: 1657284
Number of extensions: 9193095
Number of successful extensions: 22120
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 21538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22117
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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