Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_B17
         (553 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X79239-1|CAA55821.1|  151|Homo sapiens ribosomal protein S13 pro...   136   4e-32
L01124-1|AAA60283.1|  151|Homo sapiens ribosomal protein S13 pro...   136   4e-32
D88010-1|BAA13528.1|  151|Homo sapiens ribosomal protein S13 pro...   136   4e-32
BC100032-1|AAI00033.1|  151|Homo sapiens ribosomal protein S13 p...   136   4e-32
BC066322-1|AAH66322.1|  151|Homo sapiens ribosomal protein S13 p...   136   4e-32
BC029732-1|AAH29732.1|  151|Homo sapiens ribosomal protein S13 p...   136   4e-32
BC006772-1|AAH06772.1|  151|Homo sapiens ribosomal protein S13 p...   136   4e-32
BC000475-1|AAH00475.1|  151|Homo sapiens ribosomal protein S13 p...   136   4e-32
L05090-1|AAC15854.1|  116|Homo sapiens ribosomal protein S13 pro...   119   6e-27

>X79239-1|CAA55821.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  136 bits (330), Expect = 4e-32
 Identities = 62/72 (86%), Positives = 68/72 (94%)
 Frame = +3

Query: 291 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXS 470
           I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ SRIHRLARYYKT  
Sbjct: 74  ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133

Query: 471 VLPPNWKYESST 506
           VLPPNWKYESST
Sbjct: 134 VLPPNWKYESST 145



 Score =  119 bits (287), Expect = 6e-27
 Identities = 56/60 (93%), Positives = 58/60 (96%)
 Frame = +2

Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
           SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14  SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73


>L01124-1|AAA60283.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  136 bits (330), Expect = 4e-32
 Identities = 62/72 (86%), Positives = 68/72 (94%)
 Frame = +3

Query: 291 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXS 470
           I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ SRIHRLARYYKT  
Sbjct: 74  ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133

Query: 471 VLPPNWKYESST 506
           VLPPNWKYESST
Sbjct: 134 VLPPNWKYESST 145



 Score =  119 bits (287), Expect = 6e-27
 Identities = 56/60 (93%), Positives = 58/60 (96%)
 Frame = +2

Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
           SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14  SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73


>D88010-1|BAA13528.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  136 bits (330), Expect = 4e-32
 Identities = 62/72 (86%), Positives = 68/72 (94%)
 Frame = +3

Query: 291 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXS 470
           I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ SRIHRLARYYKT  
Sbjct: 74  ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133

Query: 471 VLPPNWKYESST 506
           VLPPNWKYESST
Sbjct: 134 VLPPNWKYESST 145



 Score =  119 bits (287), Expect = 6e-27
 Identities = 56/60 (93%), Positives = 58/60 (96%)
 Frame = +2

Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
           SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14  SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73


>BC100032-1|AAI00033.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  136 bits (330), Expect = 4e-32
 Identities = 62/72 (86%), Positives = 68/72 (94%)
 Frame = +3

Query: 291 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXS 470
           I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ SRIHRLARYYKT  
Sbjct: 74  ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133

Query: 471 VLPPNWKYESST 506
           VLPPNWKYESST
Sbjct: 134 VLPPNWKYESST 145



 Score =  119 bits (287), Expect = 6e-27
 Identities = 56/60 (93%), Positives = 58/60 (96%)
 Frame = +2

Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
           SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14  SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73


>BC066322-1|AAH66322.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  136 bits (330), Expect = 4e-32
 Identities = 62/72 (86%), Positives = 68/72 (94%)
 Frame = +3

Query: 291 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXS 470
           I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ SRIHRLARYYKT  
Sbjct: 74  ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133

Query: 471 VLPPNWKYESST 506
           VLPPNWKYESST
Sbjct: 134 VLPPNWKYESST 145



 Score =  119 bits (287), Expect = 6e-27
 Identities = 56/60 (93%), Positives = 58/60 (96%)
 Frame = +2

Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
           SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14  SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73


>BC029732-1|AAH29732.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  136 bits (330), Expect = 4e-32
 Identities = 62/72 (86%), Positives = 68/72 (94%)
 Frame = +3

Query: 291 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXS 470
           I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ SRIHRLARYYKT  
Sbjct: 74  ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133

Query: 471 VLPPNWKYESST 506
           VLPPNWKYESST
Sbjct: 134 VLPPNWKYESST 145



 Score =  119 bits (287), Expect = 6e-27
 Identities = 56/60 (93%), Positives = 58/60 (96%)
 Frame = +2

Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
           SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14  SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73


>BC006772-1|AAH06772.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  136 bits (330), Expect = 4e-32
 Identities = 62/72 (86%), Positives = 68/72 (94%)
 Frame = +3

Query: 291 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXS 470
           I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ SRIHRLARYYKT  
Sbjct: 74  ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133

Query: 471 VLPPNWKYESST 506
           VLPPNWKYESST
Sbjct: 134 VLPPNWKYESST 145



 Score =  119 bits (287), Expect = 6e-27
 Identities = 56/60 (93%), Positives = 58/60 (96%)
 Frame = +2

Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
           SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14  SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73


>BC000475-1|AAH00475.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  136 bits (330), Expect = 4e-32
 Identities = 62/72 (86%), Positives = 68/72 (94%)
 Frame = +3

Query: 291 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLARYYKTXS 470
           I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ SRIHRLARYYKT  
Sbjct: 74  ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133

Query: 471 VLPPNWKYESST 506
           VLPPNWKYESST
Sbjct: 134 VLPPNWKYESST 145



 Score =  119 bits (287), Expect = 6e-27
 Identities = 56/60 (93%), Positives = 58/60 (96%)
 Frame = +2

Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
           SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14  SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73


>L05090-1|AAC15854.1|  116|Homo sapiens ribosomal protein S13
           protein.
          Length = 116

 Score =  119 bits (287), Expect = 6e-27
 Identities = 56/60 (93%), Positives = 58/60 (96%)
 Frame = +2

Query: 110 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 289
           SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 3   SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 62



 Score = 97.1 bits (231), Expect = 4e-20
 Identities = 45/54 (83%), Positives = 51/54 (94%)
 Frame = +3

Query: 291 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLAR 452
           I+K+ GLA DLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ SRIHRLAR
Sbjct: 63  ILKSKGLASDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLAR 116


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,197,458
Number of Sequences: 237096
Number of extensions: 1455621
Number of successful extensions: 9541
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9541
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)