Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_B13
(638 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 274 9e-73
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 273 3e-72
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 271 1e-71
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 215 6e-55
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 202 7e-51
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 191 1e-47
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 191 1e-47
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 186 5e-46
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 171 2e-41
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 162 6e-39
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 157 3e-37
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 130 3e-29
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 122 6e-27
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 117 3e-25
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 106 4e-22
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 97 4e-19
UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal ... 91 2e-17
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 90 4e-17
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 86 8e-16
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 83 7e-15
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 83 7e-15
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 82 1e-14
UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15; Archa... 82 1e-14
UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1; Nanoar... 69 1e-10
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar... 68 2e-10
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 50 5e-05
UniRef50_P05969 Cluster: 50S ribosomal protein L11P; n=7; Haloba... 49 1e-04
UniRef50_Q8FSA7 Cluster: 50S ribosomal protein L11; n=616; cellu... 47 3e-04
UniRef50_Q2S1Q1 Cluster: 50S ribosomal protein L11; n=3; Bacteri... 45 0.001
UniRef50_O83265 Cluster: 50S ribosomal protein L11; n=5; Bacteri... 42 0.017
UniRef50_Q7VRP3 Cluster: 50S ribosomal protein L11; n=4; Bacteri... 40 0.067
UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3; ... 37 0.47
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.47
UniRef50_Q2J5H8 Cluster: Ribosomal protein L11; n=1; Frankia sp.... 34 2.5
UniRef50_Q21QS4 Cluster: Major facilitator superfamily MFS_1; n=... 34 2.5
UniRef50_UPI00006615FB Cluster: Homolog of Homo sapiens "Splice ... 33 5.8
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 274 bits (673), Expect = 9e-73
Identities = 128/161 (79%), Positives = 146/161 (90%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 301
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRS 481
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + +V IA MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 482 MARYLSGSXKEILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
+AR LSG+ KEILGTAQSVGC V+GR PHD+IDDINSG+ +
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVE 161
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 273 bits (669), Expect = 3e-72
Identities = 127/161 (78%), Positives = 145/161 (90%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 301
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRS 481
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + +V I MR+RS
Sbjct: 93 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQMRHRS 152
Query: 482 MARYLSGSXKEILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
+AR LSG+ KEILGTAQSVGC V+GR PHD+IDDINSG+ +
Sbjct: 153 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVE 193
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 271 bits (664), Expect = 1e-71
Identities = 125/161 (77%), Positives = 144/161 (89%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 301
MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIA ATSDWKGLKITV
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 202
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRS 481
LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI E ++ IA +MR RS
Sbjct: 203 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRS 262
Query: 482 MARYLSGSXKEILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
MAR L G+ KE+LGTAQSVGCTV+G+ PHD+ID++N GS +
Sbjct: 263 MARELKGTCKEVLGTAQSVGCTVDGKHPHDVIDELNEGSIE 303
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 215 bits (526), Expect = 6e-55
Identities = 106/185 (57%), Positives = 136/185 (73%), Gaps = 24/185 (12%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDW------- 280
MPPKFDPNE+K+++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIA T DW
Sbjct: 1 MPPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWVSTQYGC 60
Query: 281 -----------------KGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQK 409
KGL++TV+LT+QNRQA ++VVPSA++L+I+ALKEPPRDRKK+K
Sbjct: 61 CDARKEQWLTWTVSAVQKGLRVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEK 120
Query: 410 NIKHNGNISLEXVVGIAXIMRNRSMARYLSGSXKEILGTAQSVGCTVEGRPPHDLIDDIN 589
NIKHN +I L+ ++ IA MR+RS+A+ L G+ EILGTA SVGC V+GR P D+ DD+
Sbjct: 121 NIKHNKSIPLDDIIEIARTMRSRSLAKELKGTVLEILGTAFSVGCQVDGRSPKDVSDDVK 180
Query: 590 SGSFD 604
+G D
Sbjct: 181 AGEID 185
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 202 bits (492), Expect = 7e-51
Identities = 95/144 (65%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Frame = +2
Query: 119 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATS-DWKGLKI 295
KMPPKFDPN + +R GGEVGA SSLAPKIGPLGLSPKKVG+DIA T+ DWKGL++
Sbjct: 62 KMPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDWKGLRV 121
Query: 296 TVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRN 475
TV+LTVQNRQA+++VVP+A+AL+I+ALKEP +DRKK K I H GN SL+ ++ +A +MR
Sbjct: 122 TVKLTVQNRQAKVSVVPTASALVIKALKEPFQDRKKVKGITHTGNCSLDDIIEVARVMRP 181
Query: 476 RSMARYLSGSXKEILGTAQSVGCT 547
+S A+ L+G+ KEILGTA+SVGCT
Sbjct: 182 KSCAKNLAGTVKEILGTAKSVGCT 205
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 191 bits (465), Expect = 1e-47
Identities = 87/149 (58%), Positives = 115/149 (77%)
Frame = +2
Query: 158 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTVQNRQAQIA 337
V +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIA T WKGLKI V+LT+QNRQA+I
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIE 84
Query: 338 VVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRSMARYLSGSXKEI 517
VVP++A+++++ L E PRDRKK KNIKHNGN+ +E V IA M+ +S A+ G+ KEI
Sbjct: 85 VVPTSASMVLKELNEAPRDRKKVKNIKHNGNLKIEQVYSIARAMKEKSRAKEFRGTVKEI 144
Query: 518 LGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
LGT S+GCTV+G+ P + + I++G D
Sbjct: 145 LGTCNSIGCTVDGKKPTTIQEMIDNGDID 173
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 191 bits (465), Expect = 1e-47
Identities = 89/159 (55%), Positives = 114/159 (71%)
Frame = +2
Query: 119 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKIT 298
KMPPKFDPN+ V +R VGGEV AT+SLAPK+GPLGL+ KK+G+DIA +T DWKGLK+T
Sbjct: 55 KMPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVT 114
Query: 299 VQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNR 478
QL V+NR A + V PS A+ +IRALKEPPRDRKK KNIKH+GNI+ ++ IA
Sbjct: 115 CQLRVKNRVATVIVTPSVASRLIRALKEPPRDRKKVKNIKHDGNIAFSEILKIAKESAPN 174
Query: 479 SMARYLSGSXKEILGTAQSVGCTVEGRPPHDLIDDINSG 595
SM + E+LGTA S+GCT++G P + + + G
Sbjct: 175 SMGASMKSVVMEVLGTAVSIGCTIDGEHPRAIQEKVQEG 213
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 186 bits (452), Expect = 5e-46
Identities = 79/158 (50%), Positives = 118/158 (74%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 301
MPPK DPNE++++N++ GGE G S+LAPK+GPLGL+PK+VGD I + WKG+++ V
Sbjct: 1 MPPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMV 60
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRS 481
L QNR A + V+P+++AL+I+ + RDRKK KN+KHNGN++LE V+ +A + +S
Sbjct: 61 NLRCQNRNADVTVIPTSSALLIKEIGGYERDRKKTKNVKHNGNLTLEQVIKVARAVEEKS 120
Query: 482 MARYLSGSXKEILGTAQSVGCTVEGRPPHDLIDDINSG 595
+A+ +G+ K++LGTAQS+G TV+G+P +I INSG
Sbjct: 121 LAKTFTGTVKQVLGTAQSLGATVDGQPVKAIIGKINSG 158
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 171 bits (415), Expect = 2e-41
Identities = 94/159 (59%), Positives = 111/159 (69%)
Frame = +2
Query: 128 PKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQL 307
PKF P EIK+ LRC G EV A S+LAPKI PLGLSPK KG
Sbjct: 131 PKFGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPK-------------KG------- 170
Query: 308 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRSMA 487
QAQI VVPSA+ALII+ALKEP RDRKKQKNIKH+GNI+ + +V IA MR+RS+
Sbjct: 171 -----QAQIEVVPSASALIIKALKEPARDRKKQKNIKHSGNITSDEIVNIARQMRHRSLD 225
Query: 488 RYLSGSXKEILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
R LSG+ KE+LGTAQS+GC V+GR PH +IDDINSG+ +
Sbjct: 226 RELSGTIKELLGTAQSLGCNVDGRHPHKIIDDINSGAVE 264
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 162 bits (394), Expect = 6e-39
Identities = 83/155 (53%), Positives = 116/155 (74%), Gaps = 2/155 (1%)
Frame = +2
Query: 137 DPNEIKIVNLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTV 313
DP + K + L+ VGGEV GAT LA ++GPLGLS K VG+DI AT+D+K LK+ VQL +
Sbjct: 8 DP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAI 64
Query: 314 QNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMR-NRSMAR 490
++R+A + V PS A LII++LKEPPRDRKK+KNI HNG++ + VV IA I R +RS +
Sbjct: 65 KDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIARSSRSYSN 124
Query: 491 YLSGSXKEILGTAQSVGCTVEGRPPHDLIDDINSG 595
LSG+ KE+LGT +S+GC V+G+ P ++ +I++G
Sbjct: 125 SLSGTVKEVLGTCKSIGCKVDGKCPKEVTREIDAG 159
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 157 bits (380), Expect = 3e-37
Identities = 74/85 (87%), Positives = 80/85 (94%)
Frame = +2
Query: 158 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTVQNRQAQIA 337
V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV+LT+QNRQAQI
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 165
Query: 338 VVPSAAALIIRALKEPPRDRKKQKN 412
VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 166 VVPSASALIIKALKEPPRDRKKQKN 190
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 130 bits (314), Expect = 3e-29
Identities = 62/144 (43%), Positives = 95/144 (65%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 301
MPP+ DPN ++ LR GG + A ++L PKIGP GL PK VG+ I AT +KG+++ V
Sbjct: 1 MPPRADPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGYKGIRVKV 60
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRS 481
++ +NRQ ++VVP+A++L+++AL E PR K + + H G + + V+ IA +R S
Sbjct: 61 RIVSKNRQPTVSVVPTASSLLVKALGEGPRTIPKGQPLLHTGTVKFDTVLDIAKELRANS 120
Query: 482 MARYLSGSXKEILGTAQSVGCTVE 553
A +G+ E+LG+A+SVGC VE
Sbjct: 121 FALKYAGTVLEVLGSARSVGCKVE 144
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 122 bits (295), Expect = 6e-27
Identities = 56/78 (71%), Positives = 67/78 (85%)
Frame = +2
Query: 371 ALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRSMARYLSGSXKEILGTAQSVGCTV 550
A KEPPRDRKKQKNIKH+GNI+ + +V IA MR+RS+AR LSG+ KEILGTAQSVGC V
Sbjct: 174 AKKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNV 233
Query: 551 EGRPPHDLIDDINSGSFD 604
+GR PHD+IDDINSG+ +
Sbjct: 234 DGRHPHDIIDDINSGAVE 251
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 117 bits (281), Expect = 3e-25
Identities = 59/99 (59%), Positives = 67/99 (67%)
Frame = -3
Query: 432 MLPLCLIFFCFLRSRGGSLRALMIRAAAEGTTAIWACLF*TVSCTVILRPFQSLVALAMS 253
MLPLCL F F S GGS +A+M + A+GTT ACLF + TV L P SLVALA+S
Sbjct: 1 MLPLCLTFLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAIS 60
Query: 252 SPTFLGDRPRGPILGAKDDVAPTSPPTHRKFTILISFGS 136
SPTF GD+P GPI GAK APTSPPT K+ L SFGS
Sbjct: 61 SPTFFGDKPNGPIFGAKAAEAPTSPPTALKYKYLTSFGS 99
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 106 bits (255), Expect = 4e-22
Identities = 58/133 (43%), Positives = 79/133 (59%)
Frame = -2
Query: 520 KNLFX*ARKVPGH*SVSHDXRNADYXFKGDVAVVFDIFLLFTVTGRLLKGSDDKGCCRGN 341
++LF +R+ G V H N D KGDV+ V +FLL +V+ L+G DD+G R
Sbjct: 17 QDLFNGSREFSGQRLVLHLSSNVDNLIKGDVSTVLYVFLLLSVSWWFLEGFDDQGRGRRY 76
Query: 340 NSYLGLSVLNCQLHSDLETLPVTCGXGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQI 161
+ L LSVL+ Q HSD +TLP+T G+VI HLF RQT+ + GQ GTD P Q+
Sbjct: 77 HLNLSLSVLDRQFHSDPQTLPITSCLGDVIAHLFWRQTQGANLGGQGRRGTDVPTGAPQV 136
Query: 160 HDFNFIWVKLRGH 122
HDF+ + V+L H
Sbjct: 137 HDFDLVGVELGWH 149
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 96.7 bits (230), Expect = 4e-19
Identities = 42/65 (64%), Positives = 53/65 (81%)
Frame = +2
Query: 410 NIKHNGNISLEXVVGIAXIMRNRSMARYLSGSXKEILGTAQSVGCTVEGRPPHDLIDDIN 589
++KHNGNI+L+ V +A +MR RSMAR+LSG+ KEILGT QSVGCTV+G PHD+ID IN
Sbjct: 67 SVKHNGNITLDDVTNVAKVMRPRSMARHLSGTVKEILGTCQSVGCTVDGMAPHDVIDKIN 126
Query: 590 SGSFD 604
SG +
Sbjct: 127 SGEIE 131
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 232
MPPKF+ NEI+ V LRC GGEVGAT+SLAPKIGPLGL
Sbjct: 1 MPPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
>UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal
protein L12; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L12 - Mus musculus
Length = 142
Score = 91.1 bits (216), Expect = 2e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Frame = +2
Query: 398 KKQKNIKHNGNISLEXVVGIAXIMRNRSMARYLSGSXKEILGTAQSVGCTVEGRPPHDLI 577
K QK+IKH+G+IS + V MR+RS+AR LSG+ KEILGT+QSVGC V+G PHD+I
Sbjct: 70 KNQKSIKHSGSISFDEFVNTVWQMRHRSLARELSGTIKEILGTSQSVGCNVDGCHPHDII 129
Query: 578 DDINSGSFD 604
DDINSG+ +
Sbjct: 130 DDINSGAVE 138
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 90.2 bits (214), Expect = 4e-17
Identities = 52/159 (32%), Positives = 87/159 (54%)
Frame = -2
Query: 592 AVDVINKIMWRPALHSTSN*LCCAKNLFX*ARKVPGH*SVSHDXRNADYXFKGDVAVVFD 413
+VD + ++W +++T++ L ++ +V SH N D F+ V VFD
Sbjct: 24 SVDSFDDVVWVLVVNTTTDGLSSTQDFLGDRSQVLTERLFSHLLSNFDDVFQLQVTTVFD 83
Query: 412 IFLLFTVTGRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVTCGXGNVITHLFRR 233
+ +L +V+ L+ D++ NN LSVL+ QL+S+L+TL + G G++ T+L
Sbjct: 84 VLVLLSVSWWFLQSGDNQRGSGWNNRSSSLSVLDLQLNSNLDTLEILGGLGDIFTNLLWG 143
Query: 232 QTKRTDFRGQR*CGTDFPADTSQIHDFNFIWVKLRGHFV 116
QT+ T+ Q T+F D+SQ+ +FIW+KL HFV
Sbjct: 144 QTQWTNLWSQSSGSTNFTTDSSQVQVLDFIWIKLWRHFV 182
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 85.8 bits (203), Expect = 8e-16
Identities = 49/154 (31%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Frame = +2
Query: 152 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTV--QNRQ 325
++V + GG A L P IGPLG++ +V +I T D++G+++ V++ V + R+
Sbjct: 4 EVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRK 63
Query: 326 AQIAV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRSMARYLSG 502
+I V +P ALI + L + + + GN++LE V+ IA + ++ ++ L
Sbjct: 64 FEIEVGIPPTTALIKKELGIETAAHEPRHEVV--GNLTLEQVIKIAKMKKDAMLSYTLKN 121
Query: 503 SXKEILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
+ KE+LGT S+G TVEG+ P ++ +I++G +D
Sbjct: 122 AVKEVLGTCGSMGVTVEGKDPKEVQKEIDAGVYD 155
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 82.6 bits (195), Expect = 7e-15
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = +2
Query: 155 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLT 310
IV +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIA T WKGLKI V+LT
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLT 84
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 82.6 bits (195), Expect = 7e-15
Identities = 49/154 (31%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Frame = +2
Query: 152 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTVQN--RQ 325
++V + GG+ A L P IGPLG++ +V I T D++G+ + V++ V R
Sbjct: 4 QVVEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIVDTDKRT 63
Query: 326 AQIAV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRSMARYLSG 502
++ V +P A+ALI + + ++ + + GNI++E +V IA + ++ +A L
Sbjct: 64 FEVEVGIPPASALIKKEIGIEKGSQEPKHQVA--GNITMEQIVKIAKMKQDAMLAYNLKN 121
Query: 503 SXKEILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
+ KE++GT SVG +VEG P + I++G FD
Sbjct: 122 ASKEVVGTCVSVGISVEGMTPSEAQKAIDAGQFD 155
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 82.2 bits (194), Expect = 1e-14
Identities = 43/135 (31%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Frame = +2
Query: 152 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATS-DWKGLKITVQLTVQNRQA 328
K+V ++ GG+V + S LA KIGP GLSPKK+G+D A T +W G+ +T++LT+ + A
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNA 66
Query: 329 QIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRSMARYLSGSX 508
+ +VPS ++L+ R ++ + ++ + ++ I+ ++ +S ++ G
Sbjct: 67 YLKIVPSVSSLLKREMQLYGKPSV----------LTFKQLIKISKKVQTKSYSKAFKGVV 116
Query: 509 KEILGTAQSVGCTVE 553
KE+LGT S+G ++
Sbjct: 117 KEVLGTCCSMGILID 131
>UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15;
Archaea|Rep: 50S ribosomal protein L11P - Sulfolobus
acidocaldarius
Length = 170
Score = 81.8 bits (193), Expect = 1e-14
Identities = 47/155 (30%), Positives = 85/155 (54%), Gaps = 4/155 (2%)
Frame = +2
Query: 152 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKI--TVQLTVQNRQ 325
K + + GG L P + LGL+ ++V I T+ +KG+ + T+++ ++
Sbjct: 4 KTIKIMVEGGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQFKGMSVPVTIEIDSSTKK 63
Query: 326 AQIAV-VPSAAALIIRALK-EPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRSMARYLS 499
I V VP+ +L+++A+ + P K I GN+ LE + IA + + A+ L+
Sbjct: 64 YDIKVGVPTTTSLLLKAINAQEPSGDPAHKKI---GNLDLEQIADIAIKKKPQLSAKTLT 120
Query: 500 GSXKEILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
+ K +LGTA+S+G TVEG+ P D+I +I+ G ++
Sbjct: 121 AAIKSLLGTARSIGITVEGKDPKDVIKEIDQGKYN 155
>UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L11P -
Nanoarchaeum equitans
Length = 160
Score = 68.9 bits (161), Expect = 1e-10
Identities = 41/154 (26%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Frame = +2
Query: 158 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTV--QNRQAQ 331
+ L GG+ + P + P ++P KV +I T +++GL + V++ + + ++ +
Sbjct: 6 IRLLVTGGKATPGPPIGPALSPFKINPGKVVAEINKLTKEYEGLPVPVEIIINPETKEYK 65
Query: 332 IAV-VPSAAALIIRALKEPPRDRKKQKNIKH-NGNISLEXVVGIAXIMRNRSMARYLSGS 505
I V +P +AL+++A R Q+ + GN+S++ VV IA + L +
Sbjct: 66 IIVGLPPTSALLMKAAGVT---RGPQRTVHEWVGNVSMKDVVEIAKKKIDSMPTSSLKAA 122
Query: 506 XKEILGTAQSVGCTVEGRPPHDLIDDINSGSFDH 607
K +LGTA++ G VE + P ++ +++ G +DH
Sbjct: 123 VKSVLGTARATGIKVENKDPKEVTKEVDEGKWDH 156
>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L11P -
Thermoplasma volcanium
Length = 158
Score = 68.1 bits (159), Expect = 2e-10
Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Frame = +2
Query: 176 GGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTV---QNRQAQIAV-V 343
GG+ + P +GPLGL+ +V +I T +++G+++ V +TV + ++ +I V V
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTVIDPETKKYEITVGV 70
Query: 344 PSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRSMARYLSGSXKEILG 523
P +AL+ + L KK++ + GN +LE + +A +A+ L + E+LG
Sbjct: 71 PPTSALLKKELGLEKGASKKKEAVA--GNATLEQIKNVAIKKMPSMLAKDLKSAVLEVLG 128
Query: 524 TAQSVGCTVEGRPPHDLIDDINSG 595
T ++G VEG+ P ++ I SG
Sbjct: 129 TCVAMGINVEGKDPKEVQKLIKSG 152
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 50.0 bits (114), Expect = 5e-05
Identities = 21/34 (61%), Positives = 21/34 (61%)
Frame = -1
Query: 284 PSSHLWXWQCHHPPF*ETDQEDRF*GPKMMWHRL 183
PSSH WQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_P05969 Cluster: 50S ribosomal protein L11P; n=7;
Halobacteriaceae|Rep: 50S ribosomal protein L11P -
Halobacterium salinarium (Halobacterium halobium)
Length = 163
Score = 48.8 bits (111), Expect = 1e-04
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 2/151 (1%)
Frame = +2
Query: 158 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTVQNRQA-QI 334
+ + GG+ L P++GP + + V +I T + G ++ V + ++ + I
Sbjct: 5 IEVLVAGGQADPGPPLGPELGPTPVDVQAVVQEINDQTEAFDGTEVPVTIEYEDDGSFSI 64
Query: 335 AV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRSMARYLSGSXK 511
V VP AAL+ + Q+N ++S+E + IA + +A + K
Sbjct: 65 EVGVPPTAALVKDEAGFDTGSGEPQENFV--ADLSIEQLKTIAEQKKPDLLAYDARNAAK 122
Query: 512 EILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
E+ GT S+G T+EG + ++ G +D
Sbjct: 123 EVAGTCASLGVTIEGEDARTFNERVDDGDYD 153
>UniRef50_Q8FSA7 Cluster: 50S ribosomal protein L11; n=616; cellular
organisms|Rep: 50S ribosomal protein L11 -
Corynebacterium efficiens
Length = 144
Score = 47.2 bits (107), Expect = 3e-04
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Frame = +2
Query: 155 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTV-QNRQAQ 331
++ L+ G+ + P +G G++ + AT + +G + V++TV ++R
Sbjct: 11 LIKLQIQAGQANPAPPVGPALGAHGVNIMEFCKAYNAATENQRGNVVPVEITVYEDRSFD 70
Query: 332 IAV-VPSAAALIIRALKEPPRDRKKQKNIKHN---GNISLEXVVGIAXIMRNRSMARYLS 499
+ P AA L+++A +K + H G ++++ + IA + AR +
Sbjct: 71 FKLKTPPAAKLLLKAA-----GLQKGSGVPHTNKVGKVTMDQIREIAETKKEDLNARDID 125
Query: 500 GSXKEILGTAQSVGCTVEG 556
+ K I GTA+S+G TVEG
Sbjct: 126 AAAKIIAGTARSMGITVEG 144
>UniRef50_Q2S1Q1 Cluster: 50S ribosomal protein L11; n=3;
Bacteria|Rep: 50S ribosomal protein L11 - Salinibacter
ruber (strain DSM 13855)
Length = 146
Score = 45.2 bits (102), Expect = 0.001
Identities = 31/138 (22%), Positives = 57/138 (41%)
Frame = +2
Query: 158 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTVQNRQAQIA 337
+ L+ GG+ + P +G G++ + T D G + V++TV ++
Sbjct: 9 IKLQIKGGQANPAPPIGPALGQHGVNIMEFCKAFNSRTEDRMGTLLPVEITVYADRSFDF 68
Query: 338 VVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRSMARYLSGSXKEI 517
+V S A ++ K G ++ + + IA A + +
Sbjct: 69 IVKSPPASVLLKQKADIETAAGDPLRDDAGTVTWDDCLDIADQKLQDLNAHTVEKGASMV 128
Query: 518 LGTAQSVGCTVEGRPPHD 571
GTA+S+G TVEG+P H+
Sbjct: 129 AGTARSMGITVEGKPAHE 146
>UniRef50_O83265 Cluster: 50S ribosomal protein L11; n=5;
Bacteria|Rep: 50S ribosomal protein L11 - Treponema
pallidum
Length = 146
Score = 41.5 bits (93), Expect = 0.017
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Frame = +2
Query: 158 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWK-GLKITVQLTVQNRQAQI 334
+ L+C G+ + P +GP G+S + T + GL + V +TV + ++
Sbjct: 11 IKLQCPAGKATPAPPVGPALGPHGVSAPQFVQQFNDRTKSMEPGLVVPVVVTVYSDKSFS 70
Query: 335 AVV--PSAAALIIRA--LKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRSMARYLSG 502
V+ P AA LI +A +++ + KQK + +SL + IA + A L
Sbjct: 71 FVLKTPPAAVLIRKACGIEKGSTNSVKQKVAR----LSLAQLTEIAQVKLPDMSALTLDA 126
Query: 503 SXKEILGTAQSVGCTVE 553
+ + I GTA+S+G VE
Sbjct: 127 AKRIIAGTARSMGVEVE 143
>UniRef50_Q7VRP3 Cluster: 50S ribosomal protein L11; n=4;
Bacteria|Rep: 50S ribosomal protein L11 - Blochmannia
floridanus
Length = 146
Score = 39.5 bits (88), Expect = 0.067
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Frame = +2
Query: 203 LAPKIGPLGLSPKKVGDDIAXATSDWK-GLKITVQLTVQ-NRQAQIAVVPSAAALIIRAL 376
+ P +G G++ K D T+D++ GL + V +TV +R + A +++
Sbjct: 26 IGPALGQQGINIMKFCKDFNTRTADFEMGLILPVVITVYVDRSFSFVIKTPTAVFLLKKA 85
Query: 377 KEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRSMARYLSGSXKEILGTAQSVGCTVE 553
+K K + G + + + IA I + L + K I+GTA+S+G VE
Sbjct: 86 AGIKSGSEKPKCVSV-GKVLISQIYEIAKIKLIDMTSLNLESASKSIMGTARSIGLEVE 143
>UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 260
Score = 36.7 bits (81), Expect = 0.47
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Frame = +2
Query: 158 VNLRCVGGEVGATSSLAPKIGPLGL-----SPKKVGDD-----IAXATSDWKGLKITVQL 307
V L C GGEVG+ S A + P + K VG+ A W+ +
Sbjct: 98 VPLPCTGGEVGSKSEPAAAVAPAVIVDVKEEEKSVGNGGGGGGAQEAARWWRAGGADGGV 157
Query: 308 TVQNRQ-AQIAVVPSAAALIIRALKEPPRDRK 400
TVQ R+ A++AV P A A +RAL+ PPR K
Sbjct: 158 TVQPRERARVAVQP-ADARRLRALRAPPRQGK 188
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 36.7 bits (81), Expect = 0.47
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = -2
Query: 433 DVAVVFDIFLLFTVTGRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVT 272
++++ + +F LF T + + +D C G S++ L +++ +HS + T+P T
Sbjct: 288 ELSLYYKLFTLFKTTPKSEEKTDTMDCINGIRSFMMLQIISHHVHSAIRTIPTT 341
>UniRef50_Q2J5H8 Cluster: Ribosomal protein L11; n=1; Frankia sp.
CcI3|Rep: Ribosomal protein L11 - Frankia sp. (strain
CcI3)
Length = 165
Score = 34.3 bits (75), Expect = 2.5
Identities = 27/136 (19%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Frame = +2
Query: 155 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTV-QNRQAQ 331
+V ++ GG + + +G G++ V + A++ GL+++ +++ ++R +
Sbjct: 33 VVRIQQEGGNANV-AKIGQALGTYGVNIVGVMKEFNEASAIHHGLQVSADVSIFEDRSFE 91
Query: 332 IAVV-PSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRSMARYLSGSX 508
++V P+ +L+++A R + + +H G +++ + IA + + +
Sbjct: 92 LSVKSPATTSLLLQAAGV--RKGSPRPHAEHAGAVTVSQLREIAKVKLPDLNVDSMEAAE 149
Query: 509 KEILGTAQSVGCTVEG 556
K + GTA+S+G V G
Sbjct: 150 KIVAGTARSMGIKVTG 165
>UniRef50_Q21QS4 Cluster: Major facilitator superfamily MFS_1; n=1;
Rhodoferax ferrireducens T118|Rep: Major facilitator
superfamily MFS_1 - Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118)
Length = 381
Score = 34.3 bits (75), Expect = 2.5
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = -3
Query: 486 AIDLFLMXFAMPTTXSREMLPLCLIFFCFLRSRGGSLRALMIRAAAEGT--TAIWACLF* 313
A LM P+T +L L +F C G A + R A +GT TA CLF
Sbjct: 277 AASSILMVMLQPSTSPALVLTLVCVFGCTAIGWNGVYLAAVARQAPQGTAGTATAGCLFF 336
Query: 312 TVSCTVILRPFQSLVALAMSS 250
T V+ P +++ A+ +
Sbjct: 337 TYIGVVVSAPLFGVLSTALGN 357
>UniRef50_UPI00006615FB Cluster: Homolog of Homo sapiens "Splice
Isoform 2 of Nesprin 2; n=1; Takifugu rubripes|Rep:
Homolog of Homo sapiens "Splice Isoform 2 of Nesprin 2 -
Takifugu rubripes
Length = 4795
Score = 33.1 bits (72), Expect = 5.8
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Frame = +2
Query: 167 RCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTVQNRQAQIAVVP 346
R G+V S +GP+ + P+ ++ S GL +T L +N+ A+++
Sbjct: 2236 RSKNGQVSIISETVQHLGPVNVEPQPSKKEVNSQNSSNTGLAVTAALVEENK-AKLSPTQ 2294
Query: 347 SAAALIIRALKEPPRDRKK--QKNIKHNG-NISLEXVVGIAXIMRNRSMA 487
+ + K PP K K IK G SLE G +R RS A
Sbjct: 2295 RKS----KGPKHPPEPATKGNGKAIKEAGRQQSLEKTEGKLTPLRRRSKA 2340
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,350,757
Number of Sequences: 1657284
Number of extensions: 12799874
Number of successful extensions: 31334
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 30436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31314
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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