Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_B13
(638 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 274 1e-73
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 274 1e-73
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 274 1e-73
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 274 1e-73
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 274 1e-73
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 273 4e-73
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 262 1e-69
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 143 3e-50
BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C... 50 7e-06
AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C... 50 7e-06
BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member ... 47 5e-05
BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing ... 30 8.0
AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens ... 30 8.0
AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled recep... 30 8.0
AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein. 30 8.0
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 274 bits (673), Expect = 1e-73
Identities = 128/161 (79%), Positives = 146/161 (90%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 301
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRS 481
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + +V IA MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 482 MARYLSGSXKEILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
+AR LSG+ KEILGTAQSVGC V+GR PHD+IDDINSG+ +
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVE 161
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 274 bits (673), Expect = 1e-73
Identities = 128/161 (79%), Positives = 146/161 (90%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 301
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRS 481
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + +V IA MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 482 MARYLSGSXKEILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
+AR LSG+ KEILGTAQSVGC V+GR PHD+IDDINSG+ +
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVE 161
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 274 bits (673), Expect = 1e-73
Identities = 128/161 (79%), Positives = 146/161 (90%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 301
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRS 481
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + +V IA MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 482 MARYLSGSXKEILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
+AR LSG+ KEILGTAQSVGC V+GR PHD+IDDINSG+ +
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVE 161
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 274 bits (673), Expect = 1e-73
Identities = 128/161 (79%), Positives = 146/161 (90%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 301
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRS 481
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + +V IA MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 482 MARYLSGSXKEILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
+AR LSG+ KEILGTAQSVGC V+GR PHD+IDDINSG+ +
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVE 161
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 274 bits (673), Expect = 1e-73
Identities = 128/161 (79%), Positives = 146/161 (90%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 301
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRS 481
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + +V IA MR+RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRS 120
Query: 482 MARYLSGSXKEILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
+AR LSG+ KEILGTAQSVGC V+GR PHD+IDDINSG+ +
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVE 161
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 273 bits (669), Expect = 4e-73
Identities = 127/161 (78%), Positives = 145/161 (90%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 301
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRS 481
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + +V I MR+RS
Sbjct: 93 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQMRHRS 152
Query: 482 MARYLSGSXKEILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
+AR LSG+ KEILGTAQSVGC V+GR PHD+IDDINSG+ +
Sbjct: 153 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVE 193
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 262 bits (641), Expect = 1e-69
Identities = 122/161 (75%), Positives = 142/161 (88%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 301
MPPKFDPNEIK+V LRC GEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 302 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRS 481
+LT++NRQAQI VVPSA+A II+ALK+PPRDRKKQKNIKHNGNI+ + +V IA MR+RS
Sbjct: 61 KLTIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRS 120
Query: 482 MARYLSGSXKEILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
+AR LSG+ KEI GTAQS+GC V+G PHD+IDDINSG+ +
Sbjct: 121 LARELSGTIKEIPGTAQSMGCNVDGHHPHDIIDDINSGAVE 161
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 143 bits (346), Expect(2) = 3e-50
Identities = 67/91 (73%), Positives = 80/91 (87%)
Frame = +2
Query: 332 IAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEXVVGIAXIMRNRSMARYLSGSXK 511
I VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ + +V IA MR+RS+AR LSG+ K
Sbjct: 38 IEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIK 97
Query: 512 EILGTAQSVGCTVEGRPPHDLIDDINSGSFD 604
EILGTAQSVGC V+GR PHD+IDDINSG+ +
Sbjct: 98 EILGTAQSVGCNVDGRHPHDIIDDINSGAVE 128
Score = 75.8 bits (178), Expect(2) = 3e-50
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 232
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGL
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGL 37
>BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 50.0 bits (114), Expect = 7e-06
Identities = 21/34 (61%), Positives = 21/34 (61%)
Frame = -1
Query: 284 PSSHLWXWQCHHPPF*ETDQEDRF*GPKMMWHRL 183
PSSH WQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 50.0 bits (114), Expect = 7e-06
Identities = 21/34 (61%), Positives = 21/34 (61%)
Frame = -1
Query: 284 PSSHLWXWQCHHPPF*ETDQEDRF*GPKMMWHRL 183
PSSH WQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 47.2 bits (107), Expect = 5e-05
Identities = 20/34 (58%), Positives = 20/34 (58%)
Frame = -1
Query: 284 PSSHLWXWQCHHPPF*ETDQEDRF*GPKMMWHRL 183
PSSH WQCHH PF TD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLVTDPGGRSWGPGQKWHRL 118
>BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing 1A
protein.
Length = 724
Score = 29.9 bits (64), Expect = 8.0
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +2
Query: 140 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 262
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 206 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 250
>AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens
cDNA FLJ90433 fis, clone NT2RP3000721. ).
Length = 713
Score = 29.9 bits (64), Expect = 8.0
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +2
Query: 140 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 262
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 199 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 243
>AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled receptor
protein.
Length = 915
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 275 DWKGLKITVQLTVQNRQAQIAVVPSAAALIIR--ALKEPPRDRK 400
DWKG+ +T + Q QI ++ A+L IR L EP + RK
Sbjct: 435 DWKGIPVTQVQSTQGYNYQIEMIQQNASLPIRGHVLIEPDQFRK 478
>AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein.
Length = 651
Score = 29.9 bits (64), Expect = 8.0
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +2
Query: 140 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 262
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 136 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,911,222
Number of Sequences: 237096
Number of extensions: 2051268
Number of successful extensions: 7739
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7736
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -