Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_B06
         (654 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9Y2X3 Cluster: Nucleolar protein 5; n=86; Eukaryota|Re...    51   3e-05
UniRef50_O04656 Cluster: Putative nucleolar protein NOP5-3; n=2;...    44   0.004
UniRef50_Q0GNK8 Cluster: Putative uncharacterized protein; n=1; ...    40   0.039
UniRef50_A0CPI4 Cluster: Chromosome undetermined scaffold_23, wh...    39   0.12 
UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI150...    36   0.64 
UniRef50_Q4UEQ5 Cluster: Nucleolar protein nop5, putative; n=11;...    33   4.5  
UniRef50_UPI0000498D61 Cluster: snoRNA binding protein; n=1; Ent...    33   6.0  
UniRef50_A0DZD8 Cluster: Chromosome undetermined scaffold_7, who...    33   7.9  

>UniRef50_Q9Y2X3 Cluster: Nucleolar protein 5; n=86; Eukaryota|Rep:
           Nucleolar protein 5 - Homo sapiens (Human)
          Length = 529

 Score = 50.8 bits (116), Expect = 3e-05
 Identities = 22/34 (64%), Positives = 28/34 (82%)
 Frame = +2

Query: 551 MLVLFETPAGYAIFKLLDESXLSEIDNLYQEFNT 652
           MLVLFET  GYAIFK+L+E  L E+D+L++EF T
Sbjct: 1   MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFET 34


>UniRef50_O04656 Cluster: Putative nucleolar protein NOP5-3; n=2;
           Arabidopsis thaliana|Rep: Putative nucleolar protein
           NOP5-3 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 450

 Score = 43.6 bits (98), Expect = 0.004
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = +2

Query: 551 MLVLFETPAGYAIFKLLDESXLSEIDNLYQEF 646
           MLVLFET  G+A+FK+LDE  LS +++L  EF
Sbjct: 1   MLVLFETSGGFALFKVLDEGKLSNVEDLGTEF 32


>UniRef50_Q0GNK8 Cluster: Putative uncharacterized protein; n=1;
           uncultured organism|Rep: Putative uncharacterized
           protein - uncultured organism
          Length = 74

 Score = 40.3 bits (90), Expect = 0.039
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +2

Query: 548 SMLVLFETPAGYAIFKLLDE 607
           S+LVLFETP GYA+FKLLDE
Sbjct: 40  SLLVLFETPGGYALFKLLDE 59


>UniRef50_A0CPI4 Cluster: Chromosome undetermined scaffold_23, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_23,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 520

 Score = 38.7 bits (86), Expect = 0.12
 Identities = 14/29 (48%), Positives = 24/29 (82%)
 Frame = +2

Query: 551 MLVLFETPAGYAIFKLLDESXLSEIDNLY 637
           ML+L ETPAG+A+F++ +   L++I+N+Y
Sbjct: 1   MLILIETPAGFALFQVANTKTLNKIENIY 29


>UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI1500w;
            n=2; cellular organisms|Rep: Putative uncharacterized
            protein PFI1500w - Plasmodium falciparum (isolate 3D7)
          Length = 4530

 Score = 36.3 bits (80), Expect = 0.64
 Identities = 22/78 (28%), Positives = 36/78 (46%)
 Frame = -2

Query: 470  SLTNTSHNSTASL*VNTFFFKRFYDXVXKTFKSCLILLYIXNFMKNDNME*NEMKMINLK 291
            S +NT+  +T +   N   + R YD +    K  ++ +Y+  F  + N+  N    IN+ 
Sbjct: 3958 SSSNTTITTTTTNNNNNSDYTRVYDYLESFIKGEIVNMYMNIFRNDINIYTNIPNNININ 4017

Query: 290  HYSTGMKFNEMR*YGMKY 237
             Y  GM F +   Y  KY
Sbjct: 4018 PYIYGMNFYDYNFYNEKY 4035


>UniRef50_Q4UEQ5 Cluster: Nucleolar protein nop5, putative; n=11;
           Apicomplexa|Rep: Nucleolar protein nop5, putative -
           Theileria annulata
          Length = 496

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +2

Query: 551 MLVLFETPAGYAIFKLLDESXLS-EIDNLYQEF 646
           ML+L ETPAGY +FKL ++  L    + +Y+ F
Sbjct: 1   MLMLLETPAGYGLFKLTNDKMLECSAEEVYKYF 33


>UniRef50_UPI0000498D61 Cluster: snoRNA binding protein; n=1;
           Entamoeba histolytica HM-1:IMSS|Rep: snoRNA binding
           protein - Entamoeba histolytica HM-1:IMSS
          Length = 503

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +2

Query: 551 MLVLFETPAGYAIFKLLDESXLSE 622
           M +L ETPAGYA+ K+ +E  +SE
Sbjct: 1   MYILHETPAGYALIKIKEEGIISE 24


>UniRef50_A0DZD8 Cluster: Chromosome undetermined scaffold_7, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_7,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1216

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +2

Query: 581 YAIFKLLDESXLSEIDNLYQEFN 649
           ++I +  D+S LS +DNLYQ+FN
Sbjct: 578 FSICRFCDQSSLSNLDNLYQDFN 600


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,579,099
Number of Sequences: 1657284
Number of extensions: 9083784
Number of successful extensions: 17284
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17279
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)