Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_B06
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032592-1|AAH32592.1|  529|Homo sapiens nucleolar protein NOP5/...    51   4e-06
BC009306-1|AAH09306.1|  522|Homo sapiens NOP5/NOP58 protein prot...    51   4e-06
AF263608-1|AAF91394.1|  529|Homo sapiens nucleolar protein 5 pro...    51   4e-06
AF123534-1|AAD27610.1|  529|Homo sapiens nucleolar protein NOP5/...    51   4e-06
AC064836-1|AAY24145.1|  529|Homo sapiens unknown protein.              51   4e-06

>BC032592-1|AAH32592.1|  529|Homo sapiens nucleolar protein
           NOP5/NOP58 protein.
          Length = 529

 Score = 50.8 bits (116), Expect = 4e-06
 Identities = 22/34 (64%), Positives = 28/34 (82%)
 Frame = +2

Query: 551 MLVLFETPAGYAIFKLLDESXLSEIDNLYQEFNT 652
           MLVLFET  GYAIFK+L+E  L E+D+L++EF T
Sbjct: 1   MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFET 34


>BC009306-1|AAH09306.1|  522|Homo sapiens NOP5/NOP58 protein
           protein.
          Length = 522

 Score = 50.8 bits (116), Expect = 4e-06
 Identities = 22/34 (64%), Positives = 28/34 (82%)
 Frame = +2

Query: 551 MLVLFETPAGYAIFKLLDESXLSEIDNLYQEFNT 652
           MLVLFET  GYAIFK+L+E  L E+D+L++EF T
Sbjct: 1   MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFET 34


>AF263608-1|AAF91394.1|  529|Homo sapiens nucleolar protein 5
           protein.
          Length = 529

 Score = 50.8 bits (116), Expect = 4e-06
 Identities = 22/34 (64%), Positives = 28/34 (82%)
 Frame = +2

Query: 551 MLVLFETPAGYAIFKLLDESXLSEIDNLYQEFNT 652
           MLVLFET  GYAIFK+L+E  L E+D+L++EF T
Sbjct: 1   MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFET 34


>AF123534-1|AAD27610.1|  529|Homo sapiens nucleolar protein
           NOP5/NOP58 protein.
          Length = 529

 Score = 50.8 bits (116), Expect = 4e-06
 Identities = 22/34 (64%), Positives = 28/34 (82%)
 Frame = +2

Query: 551 MLVLFETPAGYAIFKLLDESXLSEIDNLYQEFNT 652
           MLVLFET  GYAIFK+L+E  L E+D+L++EF T
Sbjct: 1   MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFET 34


>AC064836-1|AAY24145.1|  529|Homo sapiens unknown protein.
          Length = 529

 Score = 50.8 bits (116), Expect = 4e-06
 Identities = 22/34 (64%), Positives = 28/34 (82%)
 Frame = +2

Query: 551 MLVLFETPAGYAIFKLLDESXLSEIDNLYQEFNT 652
           MLVLFET  GYAIFK+L+E  L E+D+L++EF T
Sbjct: 1   MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFET 34


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,841,542
Number of Sequences: 237096
Number of extensions: 1399743
Number of successful extensions: 1710
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1710
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)