Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_B03
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0836 - 6795224-6795263,6796027-6796128,6796264-6796401,679... 130 1e-30
07_01_0482 + 3627980-3628270,3628785-3629012,3629116-3629237,362... 90 2e-18
07_03_0517 + 19000050-19000427,19000539-19000766,19001142-190012... 85 6e-17
05_01_0510 - 4253902-4254032,4254121-4255225 30 1.4
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 30 1.9
10_08_0523 - 18518158-18518442,18518786-18518899,18518994-185192... 29 4.3
11_01_0374 - 2843405-2843508,2844134-2844239,2844327-2844409,284... 28 5.7
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 5.7
07_03_1700 - 28810239-28810870,28811304-28812594 28 7.5
>07_01_0836 -
6795224-6795263,6796027-6796128,6796264-6796401,
6796790-6796932,6797388-6797607,6798087-6798208,
6798317-6798544,6798993-6799355
Length = 451
Score = 130 bits (313), Expect = 1e-30
Identities = 61/165 (36%), Positives = 108/165 (65%)
Frame = +2
Query: 161 LFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRMLYPEEDTPEEIIQRRGVV 340
+FPLLEFL + Y E+L+AKL +LS TNM+DY DI + L+ ++ P+++++RR V
Sbjct: 19 VFPLLEFLQERALYANKEILEAKLRLLSGTNMVDYAMDIHKSLHDTDEVPDDMVRRRTDV 78
Query: 341 LSELQELQDAVXPVLRLMQRDDVMKTIETMRDPKTLINHLSTNXEYEFKIEMIDSMYRLA 520
+S L+ L +A P++ +Q + ++ +R K H+ ++ E I+++Y+ A
Sbjct: 79 VSRLRALDEATAPIVSFLQNQQL---VQELRPDKQYNLHM-LQDRFQIGPEQIETLYQFA 134
Query: 521 KYRYECGNYVESASYLYFCQLVMSPTDKNYLSVLWGKLASEILVQ 655
K++++CGNY ++A YLY + + + ++++ LS LWGKLA+EIL+Q
Sbjct: 135 KFQFDCGNYSDAAVYLYQYRALCTNSERS-LSALWGKLAAEILMQ 178
>07_01_0482 +
3627980-3628270,3628785-3629012,3629116-3629237,
3629747-3629966,3630434-3630576,3631004-3631141,
3631275-3631380
Length = 415
Score = 89.8 bits (213), Expect = 2e-18
Identities = 56/165 (33%), Positives = 92/165 (55%)
Frame = +2
Query: 161 LFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRMLYPEEDTPEEIIQRRGVV 340
+ PLLEFL + Y + E+L+AK+ +L TNM+DY DI + Y +D PE++++RR V
Sbjct: 19 VLPLLEFLQERHLYPEEEILEAKIRLLRGTNMVDYAMDIHKSRYGTDDVPEDMVKRRAEV 78
Query: 341 LSELQELQDAVXPVLRLMQRDDVMKTIETMRDPKTLINHLSTNXEYEFKIEMIDSMYRLA 520
+S L L +A+ + + Q IET+ Y++ A
Sbjct: 79 VSRLTSLGEAIDNIHQNQQIGP--DQIETL---------------YQY-----------A 110
Query: 521 KYRYECGNYVESASYLYFCQLVMSPTDKNYLSVLWGKLASEILVQ 655
K++++CGNY +A YL+ + + + +++ LS LWGKLA+EIL+Q
Sbjct: 111 KFQFDCGNYSFAAQYLHQYRALCTNIERS-LSALWGKLAAEILMQ 154
>07_03_0517 +
19000050-19000427,19000539-19000766,19001142-19001221,
19001222-19001441,19001571-19001713,19002023-19002160,
19002295-19002376
Length = 422
Score = 84.6 bits (200), Expect = 6e-17
Identities = 51/172 (29%), Positives = 97/172 (56%), Gaps = 9/172 (5%)
Frame = +2
Query: 161 LFPLLEFLAAK--ETYDQSELLQAKLEILSK-TNMIDYVTDIRRMLYPEED------TPE 313
+FPLLEFL + Y E+LQAKL +L + TNM+DY D ++L+ + D P+
Sbjct: 19 VFPLLEFLQWRPGRVYAVEEILQAKLRLLIQGTNMVDYAMDTHKLLHGDTDDDVVVPVPD 78
Query: 314 EIIQRRGVVLSELQELQDAVXPVLRLMQRDDVMKTIETMRDPKTLINHLSTNXEYEFKIE 493
++++RR V++ L L P++ ++ + P N + ++ +
Sbjct: 79 DMVERRHEVVTRLGALAAPAAPIVSALKNHHL--------GPDKEHNIRMLHERFQIGPD 130
Query: 494 MIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDKNYLSVLWGKLASEIL 649
I+++Y+ AK++++CGNY ++A L+ + + + ++++ LS WGKL++EIL
Sbjct: 131 QIEALYQYAKFQFDCGNYPDAAENLHRYRALCTSSERS-LSAQWGKLSAEIL 181
>05_01_0510 - 4253902-4254032,4254121-4255225
Length = 411
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -1
Query: 236 SPTLPAGALTGHMSPLLLRILVKETARCRSRYCPILNVKSNFE 108
SP A T H +P L R V T R R CP ++ F+
Sbjct: 66 SPASSTAARTNHAAPKLARHFVNVTGRGRPLICPTISFLPRFD 108
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 200 YDQSELLQAKLEILSKTNMIDYVTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQDAV 373
YD + + +T D D L P+EDT E ++RRGV L+E + +AV
Sbjct: 363 YDPPQDPNVFIHRAGRTARYDQEGDAIVFLLPKEDTYVEFLKRRGVPLTERECSTNAV 420
>10_08_0523 -
18518158-18518442,18518786-18518899,18518994-18519219,
18519364-18519470,18519809-18519964,18520100-18520210
Length = 332
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 230 LEILSKTNMIDY---VTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQDAVXPVL 385
+EIL ++ +++ V I ++LY ED P + + + ++ + Q Q + P+L
Sbjct: 225 VEILCQSPEVEHLPIVNAIHKVLYAAEDDPSMVAEAQAMISQQQQSEQPMLSPIL 279
>11_01_0374 -
2843405-2843508,2844134-2844239,2844327-2844409,
2844886-2845078,2845527-2845662,2846185-2846264,
2846348-2846932,2847058-2847126,2847203-2847347,
2847442-2847542,2848208-2849066,2849397-2849536,
2849606-2849783,2849885-2850287,2850770-2850833,
2851223-2851278,2851470-2851572
Length = 1134
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 246 LLKISNFACRSSDWSYVSFAAKNSSKGNSEMPIKILS 136
LL I N A + W ++S +KN S G S +K L+
Sbjct: 685 LLSIPNIAEQHEVWDFLSATSKNYSAGKSTSVMKTLA 721
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 2 PFTTYYL*ITGCWFLPTTCVSIFIRIHENKLST*VTQNLI 121
P Y GC LP + + F+R+ E+ LST QN+I
Sbjct: 98 PVIDYPRHFEGCPVLPLSLIQHFLRVCEHWLSTGNNQNII 137
>07_03_1700 - 28810239-28810870,28811304-28812594
Length = 640
Score = 27.9 bits (59), Expect = 7.5
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +2
Query: 197 TYDQSELLQAKLEILSKTNMIDYVTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQDAVX 376
T+D +LL+A E+L K + Y T + +L ED +++R V++ +E + +
Sbjct: 336 TFDLEDLLRASAEVLGKGS---YGTAYKAIL---EDGTVVVVKRLKDVVAGKKEFEQQME 389
Query: 377 PVLRLMQRDDV--MKTIETMRDPKTLINHLSTNXEYEFKIEMI 499
+ RL + ++ ++ +D K ++ TN + K+ I
Sbjct: 390 LIGRLGKHANLVPLRAYYYSKDEKLIVYDYLTNGSFSTKLHGI 432
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,504,196
Number of Sequences: 37544
Number of extensions: 282125
Number of successful extensions: 648
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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