Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_B03
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic in... 109 1e-24
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 31 0.54
Z30662-2|CAA83135.1| 181|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 28 5.1
CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical ... 28 6.7
Z49068-7|CAA88859.1| 552|Caenorhabditis elegans Hypothetical pr... 27 8.9
AC084158-26|AAM15621.2| 216|Caenorhabditis elegans Hypothetical... 27 8.9
AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical... 27 8.9
>AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic
initiation factor protein3.E protein.
Length = 432
Score = 109 bits (263), Expect = 1e-24
Identities = 55/168 (32%), Positives = 102/168 (60%), Gaps = 3/168 (1%)
Frame = +2
Query: 161 LFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRMLYPEEDTPEEIIQRRGVV 340
+ PLLEF+ + YD+ L + ++L+KTNMID V + Y + P I ++ +
Sbjct: 19 IIPLLEFIEPRGIYDEKSLTEMHRQLLTKTNMIDSVIET----YNGKPIPAAIEAKKKQI 74
Query: 341 LSELQELQDAVXPVLRLMQRDDVMKTIETMRDPK---TLINHLSTNXEYEFKIEMIDSMY 511
+ E EL+ V V+ +++ +V + ++ R+ ++ HL+ N + F ++M+D+++
Sbjct: 75 IKERDELKSKVDSVVAILEIPEVKEMMDNNRERDGNVRILEHLTQN--HNFTVDMVDTLF 132
Query: 512 RLAKYRYECGNYVESASYLYFCQLVMSPTDKNYLSVLWGKLASEILVQ 655
+ +K+ YECGNY ++ LY+ + +++ D NYL+ L+GKLASEIL+Q
Sbjct: 133 KYSKFMYECGNYTVASVCLYYYRNLVNQADPNYLNALYGKLASEILLQ 180
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = -2
Query: 502 IDHFNFKLILXVCRKMVYKSFRIPHGFNCFHYIISLHESQYWLYCILKFLQFRKNYTSPL 323
++H + K I C + V ++ H F +++++ + S+Y + I+ LQ+ TS
Sbjct: 2727 VEHHDLKRIKSACVQSVRRAVAFSHAFRVWNWLLRMVSSEYSVSDII--LQYLTTLTS-- 2782
Query: 322 YNFFRSVFFRIEHSSDV 272
YN F + +S++
Sbjct: 2783 YNRLAEYMFSAKKNSNI 2799
>Z30662-2|CAA83135.1| 181|Caenorhabditis elegans Hypothetical
protein T16H12.2 protein.
Length = 181
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 227 KLEILSKTNMIDYVTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQDAVXP 379
K I+ +T +V + +LYP++DTP +I++ R L Q+ +D P
Sbjct: 110 KHHIVCRTCQQSHVKAVCPILYPKKDTPPKILRARRRSLIRAQKKKDFQEP 160
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 197 TYDQSELLQAKLEILSKTN-MIDYVTDIRRMLYPEEDTPEEIIQRR 331
T+ Q E L+ T +ID+ I M+Y + TPEE+IQR+
Sbjct: 271 TFPQDYRTSEHAEFLNWTRVLIDFGASIG-MVYDRKTTPEEVIQRQ 315
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 197 TYDQSELLQAKLEILSKTN-MIDYVTDIRRMLYPEEDTPEEIIQRR 331
T+ Q E L+ T +ID+ I M+Y + TPEE+IQR+
Sbjct: 271 TFPQDYRTSEHAEFLNWTRVLIDFGASIG-MVYDRKTTPEEVIQRQ 315
>CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical
protein C42C1.7 protein.
Length = 710
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -2
Query: 385 QYWLYCILKFLQFRKNYTSPLYNFFRSVFFRIEHSSDVSNIIYHVSFAQN 236
++ YC+L + +TSP F SVF RI + I+Y + F ++
Sbjct: 170 KFGYYCLLGVISISYYFTSPQTTAFNSVFARIWQFL-IGMIVYLIYFKKS 218
>Z49068-7|CAA88859.1| 552|Caenorhabditis elegans Hypothetical
protein K01C8.8 protein.
Length = 552
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 503 SMYRLAKYRYECGNYVESASYLYFCQLVMSPT-DKNYLSVLWGKLASEILVQ 655
S Y + +YR + ++ S S+LY +L P+ N V W K +I+++
Sbjct: 298 STYVIPEYRLDYYDFEGSNSFLYDIRLSQDPSIAGNVAIVFWNKKLKQIILK 349
>AC084158-26|AAM15621.2| 216|Caenorhabditis elegans Hypothetical
protein Y69A2AR.32b protein.
Length = 216
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 653 VPKFR*PIYPKEPTNNSCQLATSPVD 576
V +FR P Y +PT+NS L P+D
Sbjct: 47 VGQFRRPRYSADPTSNSTDLQLRPLD 72
>AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical
protein Y69A2AR.32a protein.
Length = 384
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 653 VPKFR*PIYPKEPTNNSCQLATSPVD 576
V +FR P Y +PT+NS L P+D
Sbjct: 215 VGQFRRPRYSADPTSNSTDLQLRPLD 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,273,487
Number of Sequences: 27780
Number of extensions: 281868
Number of successful extensions: 826
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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