Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_B01
         (330 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L04483-1|AAA99893.1|   83|Homo sapiens ribosomal protein S21 pro...    66   3e-11
CR542132-1|CAG46929.1|   83|Homo sapiens RPS21 protein.                66   3e-11
BC021990-1|AAH21990.1|   83|Homo sapiens ribosomal protein S21 p...    66   3e-11
AL121832-3|CAC21458.1|   83|Homo sapiens ribosomal protein S21 p...    66   3e-11
AJ250907-1|CAB83213.1|   83|Homo sapiens ribosomal protein S21 p...    66   3e-11
AB061843-1|BAB79481.1|   83|Homo sapiens ribosomal protein S21 p...    66   3e-11
X79563-1|CAA56100.2|   97|Homo sapiens 8.2 kDa differentiation f...    63   2e-10
BC027976-1|AAH27976.1|   66|Homo sapiens RPS21 protein protein.        63   2e-10
BC018140-1|AAH18140.1|   81|Homo sapiens RPS21 protein protein.        63   2e-10
AL121832-2|CAC29248.1|   90|Homo sapiens ribosomal protein S21 p...    63   2e-10
AL121832-1|CAC29247.1|   66|Homo sapiens ribosomal protein S21 p...    63   2e-10
AB007157-1|BAA25821.1|   54|Homo sapiens ribosomal protein S21 p...    53   2e-07

>L04483-1|AAA99893.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = +2

Query: 146 LQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGILAKNY 301
           +Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL K DGI++KN+
Sbjct: 32  IQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIVSKNF 83



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 52  MQNDAGEFVDLYCPRKCSASNRLIHAKDHAS 144
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHAS 31


>CR542132-1|CAG46929.1|   83|Homo sapiens RPS21 protein.
          Length = 83

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = +2

Query: 146 LQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGILAKNY 301
           +Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL K DGI++KN+
Sbjct: 32  IQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIVSKNF 83



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 52  MQNDAGEFVDLYCPRKCSASNRLIHAKDHAS 144
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHAS 31


>BC021990-1|AAH21990.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = +2

Query: 146 LQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGILAKNY 301
           +Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL K DGI++KN+
Sbjct: 32  IQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIVSKNF 83



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 52  MQNDAGEFVDLYCPRKCSASNRLIHAKDHAS 144
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHAS 31


>AL121832-3|CAC21458.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = +2

Query: 146 LQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGILAKNY 301
           +Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL K DGI++KN+
Sbjct: 32  IQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIVSKNF 83



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 52  MQNDAGEFVDLYCPRKCSASNRLIHAKDHAS 144
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHAS 31


>AJ250907-1|CAB83213.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = +2

Query: 146 LQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGILAKNY 301
           +Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL K DGI++KN+
Sbjct: 32  IQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIVSKNF 83



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 52  MQNDAGEFVDLYCPRKCSASNRLIHAKDHAS 144
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHAS 31


>AB061843-1|BAB79481.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = +2

Query: 146 LQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGILAKNY 301
           +Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL K DGI++KN+
Sbjct: 32  IQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIVSKNF 83



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 52  MQNDAGEFVDLYCPRKCSASNRLIHAKDHAS 144
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHAS 31


>X79563-1|CAA56100.2|   97|Homo sapiens 8.2 kDa differentiation
           factor protein.
          Length = 97

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 52  MQNDAGEFVDLYCPRKCSASNRLIHAKDHAS 144
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHAS 31


>BC027976-1|AAH27976.1|   66|Homo sapiens RPS21 protein protein.
          Length = 66

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 52  MQNDAGEFVDLYCPRKCSASNRLIHAKDHAS 144
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHAS 31


>BC018140-1|AAH18140.1|   81|Homo sapiens RPS21 protein protein.
          Length = 81

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 52  MQNDAGEFVDLYCPRKCSASNRLIHAKDHAS 144
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHAS 31



 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = +2

Query: 146 LQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGILAK 295
           +Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL K DGI++K
Sbjct: 32  IQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIVSK 81


>AL121832-2|CAC29248.1|   90|Homo sapiens ribosomal protein S21
           protein.
          Length = 90

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 52  MQNDAGEFVDLYCPRKCSASNRLIHAKDHAS 144
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHAS 31



 Score = 35.1 bits (77), Expect = 0.053
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +2

Query: 146 LQLVIADVXPATGRAADTSKMYVVCGAIRRM 238
           +Q+ +A+V   TGR     K Y +CGAIRRM
Sbjct: 32  IQMNVAEVDKVTGRFNGQFKTYAICGAIRRM 62


>AL121832-1|CAC29247.1|   66|Homo sapiens ribosomal protein S21
           protein.
          Length = 66

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 52  MQNDAGEFVDLYCPRKCSASNRLIHAKDHAS 144
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHAS 31


>AB007157-1|BAA25821.1|   54|Homo sapiens ribosomal protein S21
           protein.
          Length = 54

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 24/43 (55%), Positives = 30/43 (69%)
 Frame = +2

Query: 146 LQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTK 274
           +Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL K
Sbjct: 12  IQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAK 54


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,280,787
Number of Sequences: 237096
Number of extensions: 860281
Number of successful extensions: 1706
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1706
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)