Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_A15
(656 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 161 2e-39
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 161 2e-39
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 161 2e-39
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 161 2e-39
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 161 2e-39
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 161 2e-39
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 161 2e-39
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 161 2e-39
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 161 2e-39
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 160 5e-39
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 159 6e-39
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 159 6e-39
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 159 6e-39
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 159 6e-39
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 159 6e-39
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 159 6e-39
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 159 6e-39
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 159 6e-39
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 159 6e-39
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 159 6e-39
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 159 6e-39
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 159 6e-39
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 159 6e-39
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 159 6e-39
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 159 6e-39
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 159 6e-39
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 159 6e-39
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 159 8e-39
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 154 2e-37
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 154 2e-37
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 154 2e-37
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 152 1e-36
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 95 3e-19
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 65 2e-10
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 65 2e-10
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 65 2e-10
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 65 2e-10
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 65 2e-10
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 65 2e-10
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 65 2e-10
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 65 2e-10
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 65 2e-10
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 60 9e-09
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 60 9e-09
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 60 9e-09
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 60 9e-09
AY825265-1|AAV74413.1| 549|Homo sapiens nucleostemin protein. 32 2.1
AF417846-1|AAM46639.1| 143|Homo sapiens immunoglobulin heavy ch... 31 3.6
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 31 4.8
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 31 4.8
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 31 4.8
CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein. 31 4.8
BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein. 31 4.8
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 4.8
AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial acon... 31 4.8
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 4.8
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 4.8
AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIP... 31 4.8
BC001024-1|AAH01024.1| 549|Homo sapiens guanine nucleotide bind... 30 8.3
AK027516-1|BAB55169.1| 549|Homo sapiens protein ( Homo sapiens ... 30 8.3
AK027514-1|BAB55168.1| 537|Homo sapiens protein ( Homo sapiens ... 30 8.3
AF191018-1|AAF09482.1| 560|Homo sapiens E2IG3 protein. 30 8.3
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 161 bits (391), Expect = 2e-39
Identities = 77/102 (75%), Positives = 85/102 (83%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R R
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRR 186
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 161 bits (391), Expect = 2e-39
Identities = 77/102 (75%), Positives = 85/102 (83%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R R
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRR 186
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 161 bits (391), Expect = 2e-39
Identities = 77/102 (75%), Positives = 85/102 (83%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 215
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R R
Sbjct: 216 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRR 256
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 161 bits (391), Expect = 2e-39
Identities = 77/102 (75%), Positives = 85/102 (83%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R R
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRR 186
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 161 bits (391), Expect = 2e-39
Identities = 77/102 (75%), Positives = 85/102 (83%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R R
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRR 186
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 161 bits (391), Expect = 2e-39
Identities = 77/102 (75%), Positives = 85/102 (83%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R R
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRR 186
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 161 bits (391), Expect = 2e-39
Identities = 77/102 (75%), Positives = 85/102 (83%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R R
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRR 186
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 161 bits (391), Expect = 2e-39
Identities = 77/102 (75%), Positives = 85/102 (83%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R R
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRR 186
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 161 bits (391), Expect = 2e-39
Identities = 77/102 (75%), Positives = 85/102 (83%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 78
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R R
Sbjct: 79 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRR 119
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 160 bits (388), Expect = 5e-39
Identities = 76/102 (74%), Positives = 85/102 (83%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RS+GDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSLGDGETVEFDV 145
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R R
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRR 186
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 112
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 113 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 151
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 111 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 149
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 153
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 154 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 192
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 152
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 152
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 152
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 152
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 152
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 152
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 152
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 152
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 152
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 152
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 152
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 152
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 152
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 159 bits (387), Expect = 6e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 152
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 159 bits (386), Expect = 8e-39
Identities = 78/102 (76%), Positives = 86/102 (84%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 114 VEGEKGEEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRRR 152
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 154 bits (374), Expect = 2e-37
Identities = 73/100 (73%), Positives = 83/100 (83%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPR 487
V GEKG EA VTGPGG PVKGS YA ++R+ R++ PR
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIPR 186
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 154 bits (374), Expect = 2e-37
Identities = 73/100 (73%), Positives = 83/100 (83%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPR 487
V GEKG EA VTGPGG PVKGS YA ++R+ R++ PR
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIPR 186
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 154 bits (374), Expect = 2e-37
Identities = 73/100 (73%), Positives = 83/100 (83%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPR 487
V GEKG EA VTGPGG PVKGS YA ++R+ R++ PR
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIPR 186
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 152 bits (368), Expect = 1e-36
Identities = 74/102 (72%), Positives = 84/102 (82%)
Frame = +2
Query: 188 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 367
VIA KV GTVKWFNV++GYGFI+RNDTKEDVFVH TA +NNPRK +RSVGDGE VEF V
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKEDVFVHHTAXKKNNPRKYLRSVGDGEXVEFDV 109
Query: 368 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRSR 493
V GEKG +AA VTGPGG PV+GS YAAD R ++R+Y PR R
Sbjct: 110 VEGEKGAKAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRPR 148
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/70 (65%), Positives = 54/70 (77%)
Frame = +2
Query: 278 VFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 457
+F +QTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA ++R
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 82
Query: 458 RGYHRQYFPR 487
+ R++ PR
Sbjct: 83 KS--RRFIPR 90
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 64.9 bits (151), Expect = 2e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +2
Query: 206 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 364
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 365 VVAGEKGFEAAGVTGPGGEPVKGS 436
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 64.9 bits (151), Expect = 2e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +2
Query: 206 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 364
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 365 VVAGEKGFEAAGVTGPGGEPVKGS 436
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 64.9 bits (151), Expect = 2e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +2
Query: 206 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 364
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 365 VVAGEKGFEAAGVTGPGGEPVKGS 436
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 64.9 bits (151), Expect = 2e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +2
Query: 206 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 364
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 365 VVAGEKGFEAAGVTGPGGEPVKGS 436
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 64.9 bits (151), Expect = 2e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +2
Query: 206 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 364
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 365 VVAGEKGFEAAGVTGPGGEPVKGS 436
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 64.9 bits (151), Expect = 2e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +2
Query: 206 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 364
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 365 VVAGEKGFEAAGVTGPGGEPVKGS 436
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 64.9 bits (151), Expect = 2e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +2
Query: 206 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 364
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 365 VVAGEKGFEAAGVTGPGGEPVKGS 436
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 64.9 bits (151), Expect = 2e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +2
Query: 206 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 364
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 365 VVAGEKGFEAAGVTGPGGEPVKGS 436
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 64.9 bits (151), Expect = 2e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +2
Query: 206 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 364
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 365 VVAGEKGFEAAGVTGPGGEPVKGS 436
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 59.7 bits (138), Expect = 9e-09
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +2
Query: 206 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 364
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 365 VVAGEKGFEAAGVTGPGG 418
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 59.7 bits (138), Expect = 9e-09
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +2
Query: 206 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 364
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 365 VVAGEKGFEAAGVTGPGG 418
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 59.7 bits (138), Expect = 9e-09
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +2
Query: 206 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 364
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 365 VVAGEKGFEAAGVTGPGG 418
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 59.7 bits (138), Expect = 9e-09
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +2
Query: 206 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 364
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 365 VVAGEKGFEAAGVTGPGG 418
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AY825265-1|AAV74413.1| 549|Homo sapiens nucleostemin protein.
Length = 549
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +1
Query: 406 WSRW*ASKRLTLCCRQAPWLPPPIFPSFKVAD-XAVXELHAXEDXDVVDPRPTKGVH 573
WS W + C W PPP F V D + L E D R KG H
Sbjct: 391 WSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEELEKNDAQSIRAIKGPH 447
>AF417846-1|AAM46639.1| 143|Homo sapiens immunoglobulin heavy chain
protein.
Length = 143
Score = 31.1 bits (67), Expect = 3.6
Identities = 21/48 (43%), Positives = 22/48 (45%)
Frame = +3
Query: 234 RVDMVSSTGMTPRKMCLCIRLPSPVTTHVRLCARSATERRWSLPWLPG 377
RV M S T +T M L L S T V CAR R W PW PG
Sbjct: 86 RVAMTSDTSVTTAYMELT-SLTSDDTA-VYFCARGDVNRNWLDPWGPG 131
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 4.8
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 374 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 463
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 30.7 bits (66), Expect = 4.8
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 374 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 463
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.7 bits (66), Expect = 4.8
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 374 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 463
GE+GF G+ GP GEP K P A RG
Sbjct: 544 GERGFP--GLPGPSGEPGKQGPSGASGERG 571
>CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein.
Length = 153
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 209 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 301
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein.
Length = 153
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 209 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 301
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 4.8
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 374 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 463
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial
aconitase 2, the gene Statin S).).
Length = 153
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 209 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 301
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 30.7 bits (66), Expect = 4.8
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 374 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 463
GE+GF G+ GP GEP K P A RG
Sbjct: 965 GERGFP--GLPGPSGEPGKQGPSGASGERG 992
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 30.7 bits (66), Expect = 4.8
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 374 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 463
GE+GF G+ GP GEP K P A RG
Sbjct: 971 GERGFP--GLPGPSGEPGKQGPSGASGERG 998
>AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIPPin
protein.
Length = 153
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 209 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 301
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC001024-1|AAH01024.1| 549|Homo sapiens guanine nucleotide binding
protein-like 3 (nucleolar) protein.
Length = 549
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +1
Query: 406 WSRW*ASKRLTLCCRQAPWLPPPIFPSFKVAD-XAVXELHAXEDXDVVDPRPTKGVH 573
WS W + C W PPP F V D + L E + R KG H
Sbjct: 391 WSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEELEKNNAQSIRAIKGPH 447
>AK027516-1|BAB55169.1| 549|Homo sapiens protein ( Homo sapiens
cDNA FLJ14610 fis, clone NT2RP1000958, weakly similar to
AUTOANTIGEN NGP-1. ).
Length = 549
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +1
Query: 406 WSRW*ASKRLTLCCRQAPWLPPPIFPSFKVAD-XAVXELHAXEDXDVVDPRPTKGVH 573
WS W + C W PPP F V D + L E + R KG H
Sbjct: 391 WSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEELEKNNAQSIRAIKGPH 447
>AK027514-1|BAB55168.1| 537|Homo sapiens protein ( Homo sapiens
cDNA FLJ14608 fis, clone NT2RP1000915, weakly similar to
AUTOANTIGEN NGP-1. ).
Length = 537
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +1
Query: 406 WSRW*ASKRLTLCCRQAPWLPPPIFPSFKVAD-XAVXELHAXEDXDVVDPRPTKGVH 573
WS W + C W PPP F V D + L E + R KG H
Sbjct: 379 WSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEELEKNNAQSIRAIKGPH 435
>AF191018-1|AAF09482.1| 560|Homo sapiens E2IG3 protein.
Length = 560
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +1
Query: 406 WSRW*ASKRLTLCCRQAPWLPPPIFPSFKVAD-XAVXELHAXEDXDVVDPRPTKGVH 573
WS W + C W PPP F V D + L E + R KG H
Sbjct: 391 WSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEELEKNNAQSIRAIKGPH 447
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,813,906
Number of Sequences: 237096
Number of extensions: 1468758
Number of successful extensions: 4446
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 4170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4430
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -