Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_A10
(303 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514 56 7e-09
03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294 56 7e-09
06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923 52 7e-08
06_01_0027 - 271199-271424,271628-272095,272721-273018,273133-27... 27 2.8
03_05_0602 - 26042832-26044295 27 2.8
03_06_0314 - 33077621-33077869,33078218-33078280,33079392-330794... 27 3.7
08_01_0609 + 5345761-5345862,5346808-5346871,5346958-5350191,535... 26 4.9
02_05_1157 - 34533625-34533875,34535279-34536340,34536673-345368... 26 6.5
02_02_0577 - 11736474-11736609,11736756-11737003,11738002-117380... 26 6.5
08_02_1325 - 26146775-26147247,26147397-26148579 25 8.6
05_05_0026 + 21645845-21647404 25 8.6
01_01_0631 - 4752606-4752706,4754039-4755578 25 8.6
>10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514
Length = 130
Score = 55.6 bits (128), Expect = 7e-09
Identities = 24/36 (66%), Positives = 33/36 (91%)
Frame = +2
Query: 167 IHRIRITLTSRNVRSLXKVCADLINGAKKQKLRVKG 274
++RIRITL+S+NV++L KVCADL+ GAK ++LRVKG
Sbjct: 28 LNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKG 63
>03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294
Length = 127
Score = 55.6 bits (128), Expect = 7e-09
Identities = 24/36 (66%), Positives = 33/36 (91%)
Frame = +2
Query: 167 IHRIRITLTSRNVRSLXKVCADLINGAKKQKLRVKG 274
++RIRITL+S+NV++L KVCADL+ GAK ++LRVKG
Sbjct: 25 LNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKG 60
>06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923
Length = 128
Score = 52.4 bits (120), Expect = 7e-08
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = +2
Query: 170 HRIRITLTSRNVRSLXKVCADLINGAKKQKLRVKG 274
HRIRITL+S++V++L KVC DL+ GAK + L+VKG
Sbjct: 27 HRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKG 61
>06_01_0027 -
271199-271424,271628-272095,272721-273018,273133-273343,
273427-274124,274921-274969,276059-276112,276244-276275,
276319-276484,276563-276628,276717-276812,276868-276957,
277302-277398,277496-277575,277709-277753,278006-278134,
278593-278722,278888-279222,279918-280053,280149-280328,
280422-280679,280752-281137
Length = 1409
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 65 IEKLFISAGIQQATWQPLXCQAKTSXNPRQRSPLIHRIRITLT 193
IE L SAG + + + S +P+ R P+ R+R+TLT
Sbjct: 761 IELLIESAGCSSVAAVGVMAKEQ-SGSPKPRQPVFQRMRVTLT 802
>03_05_0602 - 26042832-26044295
Length = 487
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -1
Query: 291 LACGLRPFTRSFCFLAPLMRSAQTXSSERTLREVRVILMRW 169
LA GLR R F ++ P + T ER V+ RW
Sbjct: 302 LAAGLRASGRPFLWVIPTTAAEVTEQEERASNHGMVVAGRW 342
>03_06_0314 -
33077621-33077869,33078218-33078280,33079392-33079449,
33079534-33079688,33079797-33080106,33080634-33080890,
33081280-33081359,33083888-33083948
Length = 410
Score = 26.6 bits (56), Expect = 3.7
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = +1
Query: 64 D*KVVYLGRNSTSNMAAAVXSGKD---IXKPQAEVSPYPPHQDHSYFSQ-CALTRXGLC* 231
D +V TS +A V +G++ + K + + + + S +++ C L GL
Sbjct: 105 DWEVALASTTMTSLVAVLVATGEEGSNLKKAKCQHNAADHERQRSLWARVCRLAAEGLVT 164
Query: 232 PHQWSQETEAACKGPQSACQP 294
+W++ A +GP QP
Sbjct: 165 ASKWARPGRAGTRGPSPLKQP 185
>08_01_0609 +
5345761-5345862,5346808-5346871,5346958-5350191,
5350375-5350589,5351123-5351393,5351986-5352161,
5352287-5352394,5352821-5352930,5354291-5354393,
5354658-5354828,5354952-5355080,5355322-5355504,
5355612-5355701,5355823-5355934,5356100-5356227,
5357769-5357825,5357872-5357923,5358318-5358393,
5358860-5358950,5359046-5359224,5359563-5359681,
5359783-5359880
Length = 1955
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 280 TEALYTQLLFLGSI--DEVSTDLXE*AHIARSKSDPDAVDKGR 158
+ A+Y ++ +G DEV D A I ++ + DAVD+ R
Sbjct: 501 SSAIYKEVPVMGGAQDDEVDVDFSINASITETEKEADAVDEAR 543
>02_05_1157 -
34533625-34533875,34535279-34536340,34536673-34536837,
34536993-34537941
Length = 808
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 223 LC*PHQWSQETEAACKGPQSACQPR 297
+C P QW+ + AAC G CQ R
Sbjct: 173 VCRPSQWNSVSPAACTG-VGCCQSR 196
>02_02_0577 -
11736474-11736609,11736756-11737003,11738002-11738087,
11738557-11738633,11738813-11738846,11739922-11740037,
11740121-11740659
Length = 411
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 232 PHQWSQETEAACKGPQSACQPRSS 303
PH WS EA C G A P S
Sbjct: 89 PHAWSSFPEAGCNGRSLAKAPSRS 112
>08_02_1325 - 26146775-26147247,26147397-26148579
Length = 551
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 151 AEVSPYPPHQDHSYFSQ 201
++VSP PPH D Y Q
Sbjct: 474 SQVSPKPPHPDAKYLGQ 490
>05_05_0026 + 21645845-21647404
Length = 519
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 255 CFLAPLMRSAQTXSSERTLREVRVILMRWIRGDLC 151
C L PL+RSA + SER L +++ + R+ +C
Sbjct: 171 CRLIPLLRSASSYGSERLL-DLQDVFRRFAFDCIC 204
>01_01_0631 - 4752606-4752706,4754039-4755578
Length = 546
Score = 25.4 bits (53), Expect = 8.6
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -3
Query: 184 DPDA-VDKGRPLPGVXRCLCLTXQRLPCCLLN--SGRDKQLFNQKLFSAEAGETSR 26
DP A +D+GR P R LC T + +N G + F+ L+S +T R
Sbjct: 320 DPVADIDRGRGCPQASRSLCATHHGIKFVNVNQHGGSSSRSFSITLWSWHEDQTWR 375
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,794,807
Number of Sequences: 37544
Number of extensions: 133123
Number of successful extensions: 289
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 289
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 351703996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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