Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_A10
(303 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y11119-1|CAA72004.1| 120|Drosophila melanogaster S20 ribosomal ... 65 2e-11
AY071742-1|AAL49364.1| 120|Drosophila melanogaster RH47995p pro... 65 2e-11
AE014297-2870|AAF55809.1| 120|Drosophila melanogaster CG15693-P... 65 2e-11
AY071353-1|AAL48975.1| 120|Drosophila melanogaster RE38972p pro... 60 5e-10
BT003797-1|AAO41480.1| 606|Drosophila melanogaster AT31792p pro... 29 1.1
AE014296-2437|ABI31253.1| 587|Drosophila melanogaster CG17839-P... 29 1.1
AE014296-2436|AAS65009.2| 1656|Drosophila melanogaster CG17839-P... 29 1.1
M97192-1|AAA28575.1| 991|Drosophila melanogaster glutamate rece... 28 2.6
BT003218-1|AAO24973.1| 726|Drosophila melanogaster RE03717p pro... 28 2.6
AY089517-1|AAL90255.1| 825|Drosophila melanogaster GM05459p pro... 28 2.6
AL031581-11|CAA20894.2| 1291|Drosophila melanogaster EG:115C2.10... 28 2.6
AE014298-85|AAF45537.1| 1300|Drosophila melanogaster CG13363-PA ... 28 2.6
AE014296-1137|AAF50652.2| 991|Drosophila melanogaster CG8442-PA... 28 2.6
AY075183-1|AAL68053.1| 388|Drosophila melanogaster AT13019p pro... 27 6.0
AE013599-3908|AAF47233.2| 388|Drosophila melanogaster CG4681-PA... 27 6.0
>Y11119-1|CAA72004.1| 120|Drosophila melanogaster S20 ribosomal
protein protein.
Length = 120
Score = 64.9 bits (151), Expect = 2e-11
Identities = 31/39 (79%), Positives = 32/39 (82%)
Frame = +2
Query: 158 SPLIHRIRITLTSRNVRSLXKVCADLINGAKKQKLRVKG 274
S +HRIRITLTSRNVRSL VC DLINGAK Q LRVKG
Sbjct: 16 SASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKG 54
>AY071742-1|AAL49364.1| 120|Drosophila melanogaster RH47995p
protein.
Length = 120
Score = 64.9 bits (151), Expect = 2e-11
Identities = 31/39 (79%), Positives = 32/39 (82%)
Frame = +2
Query: 158 SPLIHRIRITLTSRNVRSLXKVCADLINGAKKQKLRVKG 274
S +HRIRITLTSRNVRSL VC DLINGAK Q LRVKG
Sbjct: 16 SASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKG 54
>AE014297-2870|AAF55809.1| 120|Drosophila melanogaster CG15693-PA
protein.
Length = 120
Score = 64.9 bits (151), Expect = 2e-11
Identities = 31/39 (79%), Positives = 32/39 (82%)
Frame = +2
Query: 158 SPLIHRIRITLTSRNVRSLXKVCADLINGAKKQKLRVKG 274
S +HRIRITLTSRNVRSL VC DLINGAK Q LRVKG
Sbjct: 16 SASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKG 54
>AY071353-1|AAL48975.1| 120|Drosophila melanogaster RE38972p
protein.
Length = 120
Score = 60.1 bits (139), Expect = 5e-10
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = +2
Query: 158 SPLIHRIRITLTSRNVRSLXKVCADLINGAKKQKLRVKG 274
S +H IRITLTSRNVRSL VC DLINGAK Q LRV+G
Sbjct: 16 SASVHCIRITLTSRNVRSLENVCRDLINGAKNQNLRVEG 54
>BT003797-1|AAO41480.1| 606|Drosophila melanogaster AT31792p
protein.
Length = 606
Score = 29.1 bits (62), Expect = 1.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 184 DPDAVDKGRPLPGVXRCLCLTXQRLPCCL 98
DP+A + R PG+ RC+ +PCC+
Sbjct: 212 DPEACE--RDFPGIVRCMADGRNHVPCCV 238
>AE014296-2437|ABI31253.1| 587|Drosophila melanogaster CG17839-PC,
isoform C protein.
Length = 587
Score = 29.1 bits (62), Expect = 1.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 184 DPDAVDKGRPLPGVXRCLCLTXQRLPCCL 98
DP+A + R PG+ RC+ +PCC+
Sbjct: 212 DPEACE--RDFPGIVRCMADGRNHVPCCV 238
>AE014296-2436|AAS65009.2| 1656|Drosophila melanogaster CG17839-PB,
isoform B protein.
Length = 1656
Score = 29.1 bits (62), Expect = 1.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 184 DPDAVDKGRPLPGVXRCLCLTXQRLPCCL 98
DP+A + R PG+ RC+ +PCC+
Sbjct: 212 DPEACE--RDFPGIVRCMADGRNHVPCCV 238
>M97192-1|AAA28575.1| 991|Drosophila melanogaster glutamate
receptor subunit kainatesubtype protein.
Length = 991
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 91 NSTSNMAAAVXSGKDIXKPQAEVSPYPPHQ 180
+ST+ + G + +PQA V P PP++
Sbjct: 648 DSTAQQPPGIIGGATLSEPQAHVPPVPPNE 677
>BT003218-1|AAO24973.1| 726|Drosophila melanogaster RE03717p
protein.
Length = 726
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 91 NSTSNMAAAVXSGKDIXKPQAEVSPYPPHQ 180
+ST+ + G + +PQA V P PP++
Sbjct: 383 DSTAQQPPGIIGGATLSEPQAHVPPVPPNE 412
>AY089517-1|AAL90255.1| 825|Drosophila melanogaster GM05459p
protein.
Length = 825
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 200 NVRSLXKVCADLINGAKKQKLRVKGLSPHANQD 298
+VRS + NG + + LR++G+S H N D
Sbjct: 504 SVRSALNLTGSSSNGIEYEILRMEGISEHGNDD 536
>AL031581-11|CAA20894.2| 1291|Drosophila melanogaster EG:115C2.10
protein.
Length = 1291
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 200 NVRSLXKVCADLINGAKKQKLRVKGLSPHANQD 298
+VRS + NG + + LR++G+S H N D
Sbjct: 979 SVRSALNLTGSSSNGIEYEILRMEGISEHGNDD 1011
>AE014298-85|AAF45537.1| 1300|Drosophila melanogaster CG13363-PA
protein.
Length = 1300
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 200 NVRSLXKVCADLINGAKKQKLRVKGLSPHANQD 298
+VRS + NG + + LR++G+S H N D
Sbjct: 979 SVRSALNLTGSSSNGIEYEILRMEGISEHGNDD 1011
>AE014296-1137|AAF50652.2| 991|Drosophila melanogaster CG8442-PA
protein.
Length = 991
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 91 NSTSNMAAAVXSGKDIXKPQAEVSPYPPHQ 180
+ST+ + G + +PQA V P PP++
Sbjct: 648 DSTAQQPPGIIGGATLSEPQAHVPPVPPNE 677
>AY075183-1|AAL68053.1| 388|Drosophila melanogaster AT13019p
protein.
Length = 388
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 152 QRSPL-IHRIRITLTSRNVRSLXKVCADLINGAKKQKLRVKGL 277
QR L HR + L +R+L + DL+N KKQ + L
Sbjct: 316 QRDQLEAHRKELKLRDSRIRALKRQRGDLLNAYKKQLYMIDNL 358
>AE013599-3908|AAF47233.2| 388|Drosophila melanogaster CG4681-PA
protein.
Length = 388
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 152 QRSPL-IHRIRITLTSRNVRSLXKVCADLINGAKKQKLRVKGL 277
QR L HR + L +R+L + DL+N KKQ + L
Sbjct: 316 QRDQLEAHRKELKLRDSRIRALKRQRGDLLNAYKKQLYMIDNL 358
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,877,456
Number of Sequences: 53049
Number of extensions: 228755
Number of successful extensions: 589
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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