Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_A10
         (303 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-13|CAD21665.1|  117|Caenorhabditis elegans Hypothetical...    52   6e-08
AF077542-7|AAR12982.1|   84|Caenorhabditis elegans Hypothetical ...    26   4.5  
AC024877-13|AAF60901.2|  710|Caenorhabditis elegans Nematode ast...    25   7.9  

>AL132876-13|CAD21665.1|  117|Caenorhabditis elegans Hypothetical
           protein Y105E8A.16 protein.
          Length = 117

 Score = 52.4 bits (120), Expect = 6e-08
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +2

Query: 170 HRIRITLTSRNVRSLXKVCADLINGAKKQKLRVKG 274
           HRIR+TLTS+NV+ L KVCA LI+GAK + L VKG
Sbjct: 17  HRIRLTLTSQNVKPLEKVCAQLIDGAKNEHLIVKG 51


>AF077542-7|AAR12982.1|   84|Caenorhabditis elegans Hypothetical
           protein Y57G7A.3b protein.
          Length = 84

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +2

Query: 122 CQAKTSXNPRQRSPLIHRIRITLTSRNVRSLXKVCADLINGAKKQKLRVKG 274
           CQ+K      +RSP + +   TL     R L +     ++  ++QKL++KG
Sbjct: 28  CQSKKKFRDDERSPKMRQFAQTLLRNRPRRLAR-----LHRPRRQKLQLKG 73


>AC024877-13|AAF60901.2|  710|Caenorhabditis elegans Nematode
           astacin protease protein30 protein.
          Length = 710

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 101 ATWQPLXCQAKTSXNPRQRSPLIHRIRITLT 193
           A WQ +  + K + N + +SP   R+R+ LT
Sbjct: 478 AEWQEMVYKGKRTCNWKVKSPSGGRVRLVLT 508


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,424,109
Number of Sequences: 27780
Number of extensions: 108787
Number of successful extensions: 210
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)