Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_A07
         (342 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0486 + 19577507-19577568,19578119-19578218,19581128-195812...    87   3e-18
11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338     87   3e-18
03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228...    87   3e-18
04_04_0910 - 29321128-29321276,29321977-29322508,29323301-293237...    26   8.9  
02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874...    26   8.9  

>12_02_0486 +
           19577507-19577568,19578119-19578218,19581128-19581214,
           19581852-19581914
          Length = 103

 Score = 87.4 bits (207), Expect = 3e-18
 Identities = 36/55 (65%), Positives = 40/55 (72%)
 Frame = +2

Query: 83  MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFXEYAHDIXFKKL 247
           MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL  CRQCF   A DI F K+
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKV 55


>11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338
          Length = 56

 Score = 87.0 bits (206), Expect = 3e-18
 Identities = 36/54 (66%), Positives = 39/54 (72%)
 Frame = +2

Query: 83  MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFXEYAHDIXFKK 244
           MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL  CRQCF   A DI F K
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54


>03_06_0123 -
           31821915-31822094,31822187-31822324,31822413-31822817,
           31822897-31823212,31823305-31823543,31823800-31823903,
           31823987-31824145,31824326-31824510,31825318-31825427,
           31826900-31826947,31827047-31827241,31827354-31827422,
           31829521-31829620,31829879-31829940
          Length = 769

 Score = 87.0 bits (206), Expect = 3e-18
 Identities = 36/54 (66%), Positives = 39/54 (72%)
 Frame = +2

Query: 83  MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFXEYAHDIXFKK 244
           MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL  CRQCF   A DI F K
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54


>04_04_0910 -
           29321128-29321276,29321977-29322508,29323301-29323706,
           29323933-29324028,29324563-29324645,29326620-29326732,
           29327156-29327315
          Length = 512

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 98  IWYSHPRRYGQGSRSCRSCSNRHG 169
           IW  H RR G+GS + R   +RHG
Sbjct: 306 IWPPHARRDGRGSEAAR--MSRHG 327


>02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421,
            26887942-26888055,26888132-26888228,26889115-26889235,
            26889306-26889390,26889494-26889643,26889871-26889987,
            26890123-26890221,26890439-26890495,26890581-26890664,
            26890759-26890828,26891015-26891169,26891557-26892095,
            26892327-26892393,26892436-26892984,26893574-26893768,
            26894485-26894569,26895822-26896441,26897154-26897486,
            26897552-26897616,26897868-26897955,26898250-26898331,
            26898720-26898796,26899152-26899256,26899496-26899630,
            26900199-26900888,26901474-26902261,26902990-26904673
          Length = 2825

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 11   STFGHLEGVSNFVAR*RETI*FLKMGHANIWYSH 112
            +TFGH +G +N V + ++ I  +   HA   Y H
Sbjct: 1843 ATFGHADGEANTVNKRKKNILAVNTMHAFFSYRH 1876


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,414,327
Number of Sequences: 37544
Number of extensions: 139667
Number of successful extensions: 286
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)