Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_A03
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456417-1|CAG30303.1| 511|Homo sapiens CECR1 protein. 83 6e-16
BC051755-1|AAH51755.1| 511|Homo sapiens cat eye syndrome chromo... 83 6e-16
AF190746-1|AAF65941.1| 511|Homo sapiens CECR1 protein protein. 83 6e-16
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 34 0.39
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 33 0.67
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 33 0.67
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 33 0.67
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 33 0.67
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 33 0.67
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 33 0.67
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 33 0.67
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 33 0.67
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 33 0.67
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 33 0.67
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 33 0.67
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 33 0.67
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 32 1.6
BC033630-1|AAH33630.1| 344|Homo sapiens sorting nexin 16 protein. 31 2.7
AF305779-1|AAG25676.1| 343|Homo sapiens sorting nexin 16 protein. 31 2.7
>CR456417-1|CAG30303.1| 511|Homo sapiens CECR1 protein.
Length = 511
Score = 83.4 bits (197), Expect = 6e-16
Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Frame = +2
Query: 212 FLWLSIIMQAFCNTTHETVKKKRNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
FL L++ M F + ++ + R L KE M LG +VLN E NE M LK E+
Sbjct: 14 FLLLAVAMSFFGSAL--SIDETRAHLLLKEKMMRLGGRLVLNTKEELANERLMTLKIAEM 71
Query: 392 DQGFRHRRPFVLSKHFFEYKDDVKKTELYKLIKKMPKGAVLHAHDTSLLGPDY-VLXLTY 568
+ R F S HFF+ K +++++++ +++ MPKGA LH HD ++ D+ V +TY
Sbjct: 72 KEAMR-TLIFPPSMHFFQAKHLIERSQVFNILRMMPKGAALHLHDIGIVTMDWLVRNVTY 130
Query: 569 WKYLYVCFIDDXVL-FRFAKTLP 634
+ ++CF ++ FRFA P
Sbjct: 131 RPHCHICFTPRGIMQFRFAHPTP 153
>BC051755-1|AAH51755.1| 511|Homo sapiens cat eye syndrome
chromosome region, candidate 1 protein.
Length = 511
Score = 83.4 bits (197), Expect = 6e-16
Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Frame = +2
Query: 212 FLWLSIIMQAFCNTTHETVKKKRNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
FL L++ M F + ++ + R L KE M LG +VLN E NE M LK E+
Sbjct: 14 FLLLAVAMSFFGSAL--SIDETRAHLLLKEKMMRLGGRLVLNTKEELANERLMTLKIAEM 71
Query: 392 DQGFRHRRPFVLSKHFFEYKDDVKKTELYKLIKKMPKGAVLHAHDTSLLGPDY-VLXLTY 568
+ R F S HFF+ K +++++++ +++ MPKGA LH HD ++ D+ V +TY
Sbjct: 72 KEAMR-TLIFPPSMHFFQAKHLIERSQVFNILRMMPKGAALHLHDIGIVTMDWLVRNVTY 130
Query: 569 WKYLYVCFIDDXVL-FRFAKTLP 634
+ ++CF ++ FRFA P
Sbjct: 131 RPHCHICFTPRGIMQFRFAHPTP 153
>AF190746-1|AAF65941.1| 511|Homo sapiens CECR1 protein protein.
Length = 511
Score = 83.4 bits (197), Expect = 6e-16
Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Frame = +2
Query: 212 FLWLSIIMQAFCNTTHETVKKKRNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
FL L++ M F + ++ + R L KE M LG +VLN E NE M LK E+
Sbjct: 14 FLLLAVAMSFFGSAL--SIDETRAHLLLKEKMMRLGGRLVLNTKEELANERLMTLKIAEM 71
Query: 392 DQGFRHRRPFVLSKHFFEYKDDVKKTELYKLIKKMPKGAVLHAHDTSLLGPDY-VLXLTY 568
+ R F S HFF+ K +++++++ +++ MPKGA LH HD ++ D+ V +TY
Sbjct: 72 KEAMR-TLIFPPSMHFFQAKHLIERSQVFNILRMMPKGAALHLHDIGIVTMDWLVRNVTY 130
Query: 569 WKYLYVCFIDDXVL-FRFAKTLP 634
+ ++CF ++ FRFA P
Sbjct: 131 RPHCHICFTPRGIMQFRFAHPTP 153
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 34.3 bits (75), Expect = 0.39
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 113 VRQGVPPPMLLDRRLI*PQNFEVIKKMPTKLTVFLW-----LSIIMQAFCNTTHETVKKK 277
V G+PPP +R++ P +V++ PT+ +L + QA T E K+K
Sbjct: 104 VSDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEK 163
Query: 278 RNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
+ K+ ++M R E K+++ LKT L
Sbjct: 164 AKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGL 201
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 113 VRQGVPPPMLLDRRLI*PQNFEVIKKMPTKLTVFLW-----LSIIMQAFCNTTHETVKKK 277
V G+PPP +R++ P +V++ PT+ +L + QA T E K+K
Sbjct: 104 VFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEK 163
Query: 278 RNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
+ K+ ++M R E K+++ LKT L
Sbjct: 164 AKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGL 201
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 113 VRQGVPPPMLLDRRLI*PQNFEVIKKMPTKLTVFLW-----LSIIMQAFCNTTHETVKKK 277
V G+PPP +R++ P +V++ PT+ +L + QA T E K+K
Sbjct: 104 VFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEK 163
Query: 278 RNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
+ K+ ++M R E K+++ LKT L
Sbjct: 164 AKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGL 201
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 113 VRQGVPPPMLLDRRLI*PQNFEVIKKMPTKLTVFLW-----LSIIMQAFCNTTHETVKKK 277
V G+PPP +R++ P +V++ PT+ +L + QA T E K+K
Sbjct: 104 VFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEK 163
Query: 278 RNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
+ K+ ++M R E K+++ LKT L
Sbjct: 164 AKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGL 201
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 113 VRQGVPPPMLLDRRLI*PQNFEVIKKMPTKLTVFLW-----LSIIMQAFCNTTHETVKKK 277
V G+PPP +R++ P +V++ PT+ +L + QA T E K+K
Sbjct: 104 VFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEK 163
Query: 278 RNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
+ K+ ++M R E K+++ LKT L
Sbjct: 164 AKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGL 201
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 113 VRQGVPPPMLLDRRLI*PQNFEVIKKMPTKLTVFLW-----LSIIMQAFCNTTHETVKKK 277
V G+PPP +R++ P +V++ PT+ +L + QA T E K+K
Sbjct: 104 VFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEK 163
Query: 278 RNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
+ K+ ++M R E K+++ LKT L
Sbjct: 164 AKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGL 201
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 113 VRQGVPPPMLLDRRLI*PQNFEVIKKMPTKLTVFLW-----LSIIMQAFCNTTHETVKKK 277
V G+PPP +R++ P +V++ PT+ +L + QA T E K+K
Sbjct: 102 VFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEK 161
Query: 278 RNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
+ K+ ++M R E K+++ LKT L
Sbjct: 162 AKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGL 199
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 113 VRQGVPPPMLLDRRLI*PQNFEVIKKMPTKLTVFLW-----LSIIMQAFCNTTHETVKKK 277
V G+PPP +R++ P +V++ PT+ +L + QA T E K+K
Sbjct: 104 VFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEK 163
Query: 278 RNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
+ K+ ++M R E K+++ LKT L
Sbjct: 164 AKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGL 201
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 113 VRQGVPPPMLLDRRLI*PQNFEVIKKMPTKLTVFLW-----LSIIMQAFCNTTHETVKKK 277
V G+PPP +R++ P +V++ PT+ +L + QA T E K+K
Sbjct: 104 VFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEK 163
Query: 278 RNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
+ K+ ++M R E K+++ LKT L
Sbjct: 164 AKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGL 201
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 113 VRQGVPPPMLLDRRLI*PQNFEVIKKMPTKLTVFLW-----LSIIMQAFCNTTHETVKKK 277
V G+PPP +R++ P +V++ PT+ +L + QA T E K+K
Sbjct: 104 VFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEK 163
Query: 278 RNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
+ K+ ++M R E K+++ LKT L
Sbjct: 164 AKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGL 201
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 113 VRQGVPPPMLLDRRLI*PQNFEVIKKMPTKLTVFLW-----LSIIMQAFCNTTHETVKKK 277
V G+PPP +R++ P +V++ PT+ +L + QA T E K+K
Sbjct: 104 VFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEK 163
Query: 278 RNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
+ K+ ++M R E K+++ LKT L
Sbjct: 164 AKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGL 201
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 113 VRQGVPPPMLLDRRLI*PQNFEVIKKMPTKLTVFLW-----LSIIMQAFCNTTHETVKKK 277
V G+PPP +R++ P +V++ PT+ +L + QA T E K+K
Sbjct: 43 VFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEK 102
Query: 278 RNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
+ K+ ++M R E K+++ LKT L
Sbjct: 103 AKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGL 140
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 113 VRQGVPPPMLLDRRLI*PQNFEVIKKMPTKLTVFLW-----LSIIMQAFCNTTHETVKKK 277
V G+PPP +R++ P +V++ PT+ +L + QA T E K+K
Sbjct: 104 VFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEK 163
Query: 278 RNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
+ K+ ++M R E K+++ LKT L
Sbjct: 164 AKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGL 201
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 32.3 bits (70), Expect = 1.6
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 113 VRQGVPPPMLLDRRLI*PQNFEVIKKMPTKLTVFLW-----LSIIMQAFCNTTHETVKKK 277
V G+PPP +R++ P +V++ PT+ +L + QA T + K+K
Sbjct: 43 VFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEDKRKEK 102
Query: 278 RNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKEL 391
+ K+ ++M R E K+++ LKT L
Sbjct: 103 AKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGL 140
>BC033630-1|AAH33630.1| 344|Homo sapiens sorting nexin 16 protein.
Length = 344
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = +2
Query: 236 QAFCNTTHETVKKKRNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKELD 394
+AFC T ET + + EL EK+ EM + + L+E + ++ + +++T L+
Sbjct: 227 RAFCETLEETNYRLQKELLEKQKEMESLKKL-LSEKQLHIDTLENRIRTLSLE 278
>AF305779-1|AAG25676.1| 343|Homo sapiens sorting nexin 16 protein.
Length = 343
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = +2
Query: 236 QAFCNTTHETVKKKRNELFEKELEMMLGRDIVLNENETKVNEIFMKLKTKELD 394
+AFC T ET + + EL EK+ EM + + L+E + ++ + +++T L+
Sbjct: 227 RAFCETLEETNYRLQKELLEKQKEMESLKKL-LSEKQLHIDTLENRIRTLSLE 278
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,784,128
Number of Sequences: 237096
Number of extensions: 1779742
Number of successful extensions: 4037
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4025
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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