Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_A02
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   4.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.4  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   8.4  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -2

Query: 528 LQADHDGVEILS---LPQVDSLKSFLCRYTQLSCGFEESVDILHALE 397
           LQ DH+ +  L+      +DSLK    +Y +++     + D LH L+
Sbjct: 845 LQLDHNLLTALNGFEFEGLDSLKELFLQYNRIASIANHTFDHLHGLK 891


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 560  SRQXDRKKLTRTCETSPRSSSGAGQGVI 643
            ++  +R++  R    +P S SG G GV+
Sbjct: 1545 TKSVEREEPVRASGKAPESESGGGGGVV 1572


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 201  STANTARSWPTSPWQW 248
            STA+  +SW    W W
Sbjct: 2771 STASATKSWNPIKWDW 2786


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 267 EPENTSGAYGQLLRSA*RRHSSVQASQQH 353
           E E       + L+SA + HS  QA Q+H
Sbjct: 210 EREEQDKMKNESLKSAQQHHSQKQAQQEH 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,677
Number of Sequences: 2352
Number of extensions: 15792
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)