Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_A02
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 113 8e-26
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 113 8e-26
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 99 3e-21
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 90 1e-18
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 69 4e-12
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 43 2e-04
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 43 2e-04
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 43 2e-04
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U80840-13|AAB37936.2| 182|Caenorhabditis elegans Hypothetical p... 30 1.2
AC084153-10|AAK84591.1| 184|Caenorhabditis elegans Hypothetical... 29 3.8
AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ... 28 5.0
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ... 28 5.0
Z81041-2|CAB02787.4| 1403|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 27 8.8
AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical ... 27 8.8
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 113 bits (273), Expect = 8e-26
Identities = 57/115 (49%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Frame = +1
Query: 283 QGHMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQ 462
QG DN +V +DG+LLC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V
Sbjct: 50 QGDADNLVKVFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKS 108
Query: 463 ETFQTVDLWERQNLNSVVICLQSLGXKA-GTYGKPSIXPKEADKNVRNFSEEQLR 624
E FQTVDL+E Q+ N+V+ICL SL K+ +G+ + PKEA + R +++EQL+
Sbjct: 109 ELFQTVDLYEGQDPNAVLICLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLK 163
Score = 35.1 bits (77), Expect = 0.044
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 149 ANNRATKSGFAAEAQRKINSKYSEELAHESL 241
+++RA KSG A EAQ+KI KY + LA E L
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEIL 36
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 113 bits (273), Expect = 8e-26
Identities = 57/115 (49%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Frame = +1
Query: 283 QGHMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQ 462
QG DN +V +DG+LLC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V
Sbjct: 50 QGDADNLVKVFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKS 108
Query: 463 ETFQTVDLWERQNLNSVVICLQSLGXKA-GTYGKPSIXPKEADKNVRNFSEEQLR 624
E FQTVDL+E Q+ N+V+ICL SL K+ +G+ + PKEA + R +++EQL+
Sbjct: 109 ELFQTVDLYEGQDPNAVLICLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLK 163
Score = 35.1 bits (77), Expect = 0.044
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 149 ANNRATKSGFAAEAQRKINSKYSEELAHESL 241
+++RA KSG A EAQ+KI KY + LA E L
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEIL 36
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 98.7 bits (235), Expect = 3e-21
Identities = 49/92 (53%), Positives = 61/92 (66%)
Frame = +1
Query: 286 GHMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQE 465
G DNF+ +LKDGTLLCK AN I IKK+ F CMENINAF+E A++ GVP +E
Sbjct: 46 GERDNFHNLLKDGTLLCKAANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEE 105
Query: 466 TFQTVDLWERQNLNSVVICLQSLGXKAGTYGK 561
TFQ+V+L E ++L SV + L SLG GK
Sbjct: 106 TFQSVELVEGRDLFSVCVTLLSLGRVLQKAGK 137
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 90.2 bits (214), Expect = 1e-18
Identities = 49/100 (49%), Positives = 60/100 (60%)
Frame = +1
Query: 295 DNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQ 474
DNF E LKDG LCKL N I +KKI F C+ENIN F AAR LGV +ETFQ
Sbjct: 52 DNFREQLKDGQRLCKLVNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQ 111
Query: 475 TVDLWERQNLNSVVICLQSLGXKAGTYGKPSIXPKEADKN 594
+VDL++ ++L SV + LQSL K G PK+ K+
Sbjct: 112 SVDLFDGRDLFSVTVTLQSLARKVEKLG--ITPPKQVSKD 149
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 68.5 bits (160), Expect = 4e-12
Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Frame = +1
Query: 310 VLKDGTLLCKLANNIHPNMIKKINTS-SMAFKCMENINAFLEAARQLGVPAQETFQTVDL 486
+LKDG +LCKL + P+ N MAF MENI+ FL AA+Q GV FQTVDL
Sbjct: 58 LLKDGVMLCKLIEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDL 117
Query: 487 WERQNLNSVVICLQSLGXKAGTYGK----PSIXPKEADKNVRNFSEEQLR 624
+E + V+ CL+ L A + P+ K A + R F E +R
Sbjct: 118 YENKQCYKVIECLRLLAAVAQSRSSHLEHPAWVVKLAQSSPRQFPEAVMR 167
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +1
Query: 286 GHMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAF-LEAARQLG 450
G M F VL+DG LLC+LAN + PN I KKI ++ F C NIN F +
Sbjct: 27 GTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFN 86
Query: 451 VPAQETFQTVDLWERQNLNSVVICLQSL 534
+ + F DL+ V+ L L
Sbjct: 87 LEDADLFTAEDLYYMNGFQKVLKTLSFL 114
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +1
Query: 286 GHMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAF-LEAARQLG 450
G M F VL+DG LLC+LAN + PN I KKI ++ F C NIN F +
Sbjct: 59 GTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFN 118
Query: 451 VPAQETFQTVDLWERQNLNSVVICLQSL 534
+ + F DL+ V+ L L
Sbjct: 119 LEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +1
Query: 286 GHMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAF-LEAARQLG 450
G M F VL+DG LLC+LAN + PN I KKI ++ F C NIN F +
Sbjct: 59 GTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFN 118
Query: 451 VPAQETFQTVDLWERQNLNSVVICLQSL 534
+ + F DL+ V+ L L
Sbjct: 119 LEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 313 LKDGTLLCKLANNIHPNMIKKINT--SSMA-FKCMENINAFLEAARQLGVPAQETFQTVD 483
L DG LCK N +HP I ++ SS+A + N++ FL+ R++GVP +D
Sbjct: 548 LSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVPETTLCSQMD 607
Query: 484 LWERQNLNSV 513
+ ++N V
Sbjct: 608 IISKRNPQKV 617
>U80840-13|AAB37936.2| 182|Caenorhabditis elegans Hypothetical
protein F08D12.13 protein.
Length = 182
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +3
Query: 258 ITGEPENTSGAYGQLLRSA*RRHSSVQASQQHPPEHDQKDQ 380
+ G P+ +SG++GQ+ S ++H ++ + PP++ + Q
Sbjct: 110 VGGMPQQSSGSFGQMPSSGSQQHEALCKTNSLPPQYMSQQQ 150
>AC084153-10|AAK84591.1| 184|Caenorhabditis elegans Hypothetical
protein Y22D7AL.2 protein.
Length = 184
Score = 28.7 bits (61), Expect = 3.8
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = -3
Query: 599 RTFLSASFGXIDGFP*VPAFXPSDCKQITTELRFCLSHRSTV*KVSCAGTPNCLAASRKA 420
RT + SF G P V A S + T LR +H++T +C GTPN AAS+
Sbjct: 88 RTHQTTSFTSNCGTPNVSA--ASKQPPLHTSLR---THQTTSFTSNC-GTPNVSAASKNN 141
Query: 419 LIFSMH 402
+F++H
Sbjct: 142 HLFTLH 147
>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
protein C44E4.1a protein.
Length = 2712
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 141 SKWQTTERPNQDLQLKPRERSTANTARSWPTSPWQWI 251
+KW TT+ +D STA T +S P++P+QWI
Sbjct: 1659 TKWLTTDEEWKDC-FSVASTSTAPT-KSLPSNPYQWI 1693
>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
protein C44E4.1c protein.
Length = 2710
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 141 SKWQTTERPNQDLQLKPRERSTANTARSWPTSPWQWI 251
+KW TT+ +D STA T +S P++P+QWI
Sbjct: 1659 TKWLTTDEEWKDC-FSVASTSTAPT-KSLPSNPYQWI 1693
>Z81041-2|CAB02787.4| 1403|Caenorhabditis elegans Hypothetical
protein C27A7.4 protein.
Length = 1403
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 574 PKEADKNVRNFSEEQLRGWSGSHISSV 654
PK+ ++ VR EE L W G+++ SV
Sbjct: 885 PKQIEQYVRRKREESLYSWWGAYLESV 911
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 306 RSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRKTVGCTGTGNFSNCRP 485
R A R+ + + + PP + D GE+Q P SR T + + + P
Sbjct: 473 RPADRQSAVIPTLRGKPPAVPDSQRSGYDSSGNVGEHQSRPSSRTTSSSQRSSDAHSEEP 532
Query: 486 VGETESQLRR--DLLAVTG 536
+G S RR + +TG
Sbjct: 533 IGRNSSGARRAPEAFTITG 551
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 306 RSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRKTVGCTGTGNFSNCRP 485
R A R+ + + + PP + D GE+Q P SR T + + + P
Sbjct: 473 RPADRQSAVIPTLRGKPPAVPDSQRSGYDSSGNVGEHQSRPSSRTTSSSQRSSDAHSEEP 532
Query: 486 VGETESQLRR--DLLAVTG 536
+G S RR + +TG
Sbjct: 533 IGRNSSGARRAPEAFTITG 551
>AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical
protein Y105E8B.1f protein.
Length = 151
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 171 QDLQLKPRERSTANTARSWPTSPW 242
++L PR R TANT RS +SPW
Sbjct: 97 EELNFSPR-RLTANTTRSPVSSPW 119
>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
protein C33E10.6 protein.
Length = 1014
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 10 SHIDPRCDSDVSVDPPACLHSVHSDFTFY 96
+ I C +V ++ P +H +H+DF FY
Sbjct: 664 NEIGKGCILEVDLEYPKDIHDLHNDFPFY 692
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,053,718
Number of Sequences: 27780
Number of extensions: 357005
Number of successful extensions: 1025
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -