Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_A02
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   2.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.9  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   7.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.9  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 419 LIFSMHLKAIDDVLIFLIMFGWMLL 345
           L+   +++  DDV + L+ FGW ++
Sbjct: 378 LVPFFYVQEDDDVKLVLLNFGWQMI 402


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 324  HSSVQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRK 440
            HSS +  QQ P +  Q+ Q      Q     Q+ P+ ++
Sbjct: 1495 HSSQKTQQQQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQ 1533


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 41  CPLTRRPVYILYT 79
           C LTRR  Y++Y+
Sbjct: 188 CQLTRRQGYVIYS 200


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 41  CPLTRRPVYILYT 79
           C LTRR  Y++Y+
Sbjct: 188 CQLTRRQGYVIYS 200


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 260 HRRTREHLRGIWTTSTKCLKTAL 328
           H+  R HLRG  T +   L  +L
Sbjct: 126 HQHLRTHLRGTLTVNVSVLLLSL 148


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 41  CPLTRRPVYILYT 79
           C LTRR  Y++Y+
Sbjct: 188 CQLTRRQGYVIYS 200


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,361
Number of Sequences: 438
Number of extensions: 3951
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)