Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_P23
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0629 + 16376575-16376689,16376792-16376839,16376927-163770...    31   1.1  
09_04_0758 - 19973797-19974651                                         30   1.8  
05_04_0191 + 18927302-18927707,18928747-18928979,18929062-189291...    28   7.4  
06_01_0917 - 7077934-7080339                                           27   9.8  

>05_03_0629 +
           16376575-16376689,16376792-16376839,16376927-16377012,
           16377791-16377878,16378387-16378472,16378604-16378690,
           16379111-16379293,16379387-16379470,16379590-16379651,
           16379752-16379827,16379906-16379968,16380060-16380141,
           16380840-16380916,16381502-16381549,16381681-16381743
          Length = 415

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 320 RMLLTKPAFWPVLVHWLRFCAARANCDLSW 231
           R+ LTKP  WP LV W   C A A+ +  W
Sbjct: 89  RLQLTKPVTWPPLV-WGVLCGAAASGNFHW 117


>09_04_0758 - 19973797-19974651
          Length = 284

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +2

Query: 305 LSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRA 421
           L++ FC L+  +P V   +++ K   L  AA+YIA LRA
Sbjct: 123 LNRRFCDLRAAVPTV---SRMDKASLLADAAAYIAELRA 158


>05_04_0191 +
           18927302-18927707,18928747-18928979,18929062-18929127,
           18929262-18929340,18929935-18930014,18930099-18930122,
           18930254-18930375,18930902-18931109,18931960-18932006,
           18932914-18932998,18933292-18933355,18933488-18933609
          Length = 511

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1

Query: 602 CLGFA*LLLVLCWXYNSVLERQRSIFVILHSLN 504
           CL FA    VLCW Y +V E +  I   +H  N
Sbjct: 454 CLAFADE--VLCWLYGTVRENEDYILQFVHPFN 484


>06_01_0917 - 7077934-7080339
          Length = 801

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +2

Query: 353 ADTKLSKLDTLRLAASYIAHLRALLHEPRSAHTPPHPLSLAWPFAFQHGGSLNCA 517
           A  KL   D  R  A+Y+  ++ +     +   PPH L LA+   ++  G L+ A
Sbjct: 361 ARAKLFDEDPARKVATYVEAVKTVDPAKATGKPPPHTLWLAFAKMYEDRGLLDSA 415


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,497,887
Number of Sequences: 37544
Number of extensions: 275467
Number of successful extensions: 780
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)