Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_P23
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12347| Best HMM Match : HLH (HMM E-Value=3.8e-21) 48 5e-06
SB_56921| Best HMM Match : HLH (HMM E-Value=9.9e-19) 48 9e-06
SB_56922| Best HMM Match : HLH (HMM E-Value=1.9e-21) 47 2e-05
SB_32910| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_29722| Best HMM Match : HLH (HMM E-Value=4.9e-14) 46 4e-05
SB_27345| Best HMM Match : HLH (HMM E-Value=1.2e-20) 44 1e-04
SB_47523| Best HMM Match : HLH (HMM E-Value=1.1e-18) 44 1e-04
SB_535| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_43185| Best HMM Match : HLH (HMM E-Value=4e-20) 41 8e-04
SB_37377| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_30517| Best HMM Match : HLH (HMM E-Value=6.9e-15) 41 0.001
SB_58088| Best HMM Match : HLH (HMM E-Value=3e-12) 40 0.002
SB_2208| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_6831| Best HMM Match : HLH (HMM E-Value=3.9e-15) 39 0.003
SB_9126| Best HMM Match : HLH (HMM E-Value=2.5e-18) 39 0.004
SB_11829| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_28433| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_26423| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_6246| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066
SB_52528| Best HMM Match : HLH (HMM E-Value=3.9e-18) 33 0.27
SB_47522| Best HMM Match : HLH (HMM E-Value=1e-17) 31 1.1
SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3) 30 1.9
SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_50620| Best HMM Match : Lectin_C (HMM E-Value=2.1e-14) 29 3.3
SB_59447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_32863| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-06) 28 5.7
SB_10009| Best HMM Match : CPL (HMM E-Value=2.5) 28 5.7
SB_2429| Best HMM Match : 7tm_1 (HMM E-Value=5.1e-08) 28 7.6
>SB_12347| Best HMM Match : HLH (HMM E-Value=3.8e-21)
Length = 143
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +2
Query: 305 LSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALL 427
++ AF L+ +P P+D KLSK++TLRLA+SYIAHL +L
Sbjct: 66 VNAAFNALRLLIPTEPSDRKLSKIETLRLASSYIAHLSTIL 106
>SB_56921| Best HMM Match : HLH (HMM E-Value=9.9e-19)
Length = 200
Score = 47.6 bits (108), Expect = 9e-06
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 158 KSPSVDKRSEAXXXXXXXXXXXTQSNSG-RNSHEPHXXXXXXXXXXXMRVLSKAFCRLKT 334
KSP + SE + ++G + P ++ AF L+
Sbjct: 6 KSPCKSEPSEPEITEVTVISSEDEPSAGNKRKARPIKTTTSKKERRRTENINAAFAELRK 65
Query: 335 TLPWVPADTKLSKLDTLRLAASYIAHLRALL 427
+P VP+DTKLSK+ TL+LA SYI HL L
Sbjct: 66 HIPNVPSDTKLSKIKTLQLAMSYIHHLELQL 96
>SB_56922| Best HMM Match : HLH (HMM E-Value=1.9e-21)
Length = 157
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +2
Query: 299 RVLSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALLHEPR 439
+ ++ AF L+ +P VP DTKLSK+ TLRLA SYI +L +L E +
Sbjct: 45 QTMNTAFEDLRNHIPNVPPDTKLSKIKTLRLAISYIRYLMDILEESK 91
>SB_32910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = +2
Query: 296 MRVLSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALLHE 433
+R+++ F L+ +P+ P KLSK++TLR A +YI HL++L+ E
Sbjct: 83 VRLVNDGFSSLRQHIPYFPEKKKLSKVETLRCAVAYIKHLQSLIEE 128
>SB_29722| Best HMM Match : HLH (HMM E-Value=4.9e-14)
Length = 106
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +2
Query: 305 LSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALL 427
L KA+ L+ TLP VP DTKL +L+ L LA YI+HL +L
Sbjct: 42 LKKAYMELQKTLPNVPPDTKLPRLNILLLAIDYISHLTCVL 82
>SB_27345| Best HMM Match : HLH (HMM E-Value=1.2e-20)
Length = 153
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +2
Query: 296 MRVLSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALLHE 433
++++S F L+ +P P + KLSK++TLR A YI HL+ +L++
Sbjct: 84 VKLVSDGFAALRKHIPTTPVNKKLSKVETLRTAIEYIKHLQRILND 129
>SB_47523| Best HMM Match : HLH (HMM E-Value=1.1e-18)
Length = 207
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +2
Query: 227 QSNSGRNSHEPHXXXXXXXXXXXMRVLSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYI 406
++NS ++S+ + +S+AF L+ +P D KLSKL LRLA SYI
Sbjct: 34 KTNSWKHSNRSRRLIANARERSRIHTMSEAFESLRKAVPSYSQDQKLSKLAILRLATSYI 93
Query: 407 AHLRALLHEPRSAHTPPH 460
+ L L SA + H
Sbjct: 94 SALADLTESDTSAKSLKH 111
>SB_535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2
Query: 296 MRVLSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALL 427
+R +++ + RL+ LP P+D ++SK++TLR A YI HL +LL
Sbjct: 66 VRHVNEGYARLREHLPEEPSDKRMSKVETLRAAIRYIKHLESLL 109
>SB_43185| Best HMM Match : HLH (HMM E-Value=4e-20)
Length = 232
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +2
Query: 296 MRVLSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALLHEPRSAHTP 454
+++++ F RL+ +P P + KLSK+ TLR A YI HL+ LL + P
Sbjct: 77 VKLVNDGFMRLRKHVPTDPKNKKLSKVKTLRSAIEYIRHLQHLLGQANKHQIP 129
>SB_37377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +2
Query: 296 MRVLSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALLHEPRS 442
M+ +++AF L+ +P +P + +LSK+DTLRLA YI L +++ S
Sbjct: 56 MQSINEAFEGLRKHIPTLPYEKRLSKVDTLRLAIGYIGFLTEMINSDMS 104
>SB_30517| Best HMM Match : HLH (HMM E-Value=6.9e-15)
Length = 178
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +2
Query: 296 MRVLSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALLHEPRS 442
MRVL+ AF L+ LP AD ++K+ TLRLA +YI L +L + S
Sbjct: 100 MRVLNNAFQSLRDALPCYIADGHMAKITTLRLAINYIKALTDVLRDESS 148
>SB_58088| Best HMM Match : HLH (HMM E-Value=3e-12)
Length = 297
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 305 LSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALLHEPRSA 445
+++AF LK +LP D +SK+D LR+AA +I HL LLH+ A
Sbjct: 75 VNRAFVELKNSLPVSHMD--ISKIDILRVAAQWIDHLSELLHQDDQA 119
>SB_2208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 502
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 305 LSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALLHEPRSA 445
+++AF LK +LP D +SK+D LR+AA +I HL LLH+ A
Sbjct: 346 VNRAFVELKNSLPVSHMD--ISKIDILRVAAQWIDHLSELLHQDDQA 390
>SB_6831| Best HMM Match : HLH (HMM E-Value=3.9e-15)
Length = 242
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +2
Query: 323 RLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALL---HEPRSAHTPP 457
RLK LP P D K SK +T+R+AA YIAHL LL +P PP
Sbjct: 105 RLKDILPLFP-DEKPSKTETIRIAAVYIAHLTELLENTEKPAVEFEPP 151
>SB_9126| Best HMM Match : HLH (HMM E-Value=2.5e-18)
Length = 179
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Frame = +2
Query: 302 VLSKAFCRLKTTLPWVPADT-KLSKLDTLRLAASYIAHLRALLHEPRSAHTPPHPL---- 466
VL+ A L+ +P V + KLSK++ LRLA YIA L L+ +SA P
Sbjct: 53 VLNNALELLRKKVPCVDQNPQKLSKIEVLRLAIDYIAMLSCYLNNSQSAAVCSQPALSAS 112
Query: 467 --SLAWPFAFQHGGSLNCAVSQRWN 535
S A HG S N A + +N
Sbjct: 113 IGSQAAAMLLDHGNSFNAATAAFFN 137
>SB_11829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 305 LSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALLHE 433
L+ A+ L+ +P DTKL K+ LR A +YIAHL +L +
Sbjct: 451 LNGAYQDLRQLIPGYQCDTKLPKIKILRYAINYIAHLDNILSD 493
>SB_28433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 536
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 314 AFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALL 427
AF ++ LP P D KLSK++ LR A YI L +L
Sbjct: 457 AFAEIRKLLPTYPPDKKLSKVEILRTAVKYIQFLDGVL 494
>SB_26423| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 35.5 bits (78), Expect = 0.038
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 296 MRVLSKAFCRLKTTLPW--VPADTKLSKLDTLRLAASYIAHLRALL 427
MR +S A L+ LP V D KLSK+ TLRLA YI+ L +L
Sbjct: 50 MRSISDALLHLRYHLPQTVVAKDKKLSKIQTLRLAIRYISDLFEIL 95
>SB_6246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 34.7 bits (76), Expect = 0.066
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 326 LKTTLPWVPADTKLSKLDTLRLAASYIAHLRALLHEPR 439
L+ +P + KL+KLDTL LA YI HL +L R
Sbjct: 84 LRKAVPNTRSSGKLTKLDTLLLARDYIKHLNEILQRTR 121
>SB_52528| Best HMM Match : HLH (HMM E-Value=3.9e-18)
Length = 138
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 305 LSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALL 427
++ AF L+ +P + K SK+DT+RLA YI L LL
Sbjct: 51 VNAAFETLRNKIPLRALEKKPSKIDTIRLATRYIQDLTQLL 91
>SB_47522| Best HMM Match : HLH (HMM E-Value=1e-17)
Length = 213
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 296 MRVLSKAFCRLKTTLPWVP--ADTKLSKLDTLRLAASYIAHLRALLHEP 436
M L+ AF L+ +P + K SK+ TLRLA YIA L +L +P
Sbjct: 80 MHSLNDAFDSLRKAIPKTNYNQEEKPSKIATLRLAIHYIAALSDILGKP 128
>SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3)
Length = 769
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 422 LLHEPRSAHTPPHPLS 469
++ EP ++HTPPHPLS
Sbjct: 482 VIDEPPASHTPPHPLS 497
>SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1670
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 422 LLHEPRSAHTPPHPLS 469
++ EP ++HTPPHPLS
Sbjct: 1149 VIDEPPASHTPPHPLS 1164
>SB_50620| Best HMM Match : Lectin_C (HMM E-Value=2.1e-14)
Length = 620
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 423 YFTSHDQHIPHHIHLVWLGLSRSNMA 500
YFT Q + HI + W+GLSRSN A
Sbjct: 56 YFT---QSLSSHISMFWIGLSRSNGA 78
>SB_59447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 344 WVPADTKLSKLDTLRLAASYIAHLRALLHEPRSAHTPPHPLSLAWPFAF 490
W+P + + + R + LR + E + A P ++LAWPF F
Sbjct: 801 WIPKCNSVVRYNISRCVSC--RRLRGKVSEQKMADLPRDRVTLAWPFTF 847
>SB_32863| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-06)
Length = 309
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +1
Query: 457 TST*FGLAFRVPTWRQFKLCSITKMERWRSRTELXIQHNTKRSYA 591
TST L ++ ++ L IT E W + EL +QH T SYA
Sbjct: 61 TSTFSSLLLKI---ERYSLDVITMSETWLKQNELLLQHVTIPSYA 102
>SB_10009| Best HMM Match : CPL (HMM E-Value=2.5)
Length = 321
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 234 TQVAIRTSRTETQPMHENGPECGFCQKHSAD*RLLYPGCQLTLSCPS 374
T+ + +S T+ +HE+ C C S +LL PG T CP+
Sbjct: 204 TEYEVASSNPFTKNVHEHDAPCAVCYVSSRSAKLLIPG---TNVCPA 247
>SB_2429| Best HMM Match : 7tm_1 (HMM E-Value=5.1e-08)
Length = 377
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -1
Query: 329 SVCRMLLTKPAFWPVLVHWLRFCAARAN-CDLS---WIACHQNKNRHHQY 192
SV +MLL +FW VLV+ +R R C+L+ I + + R HQY
Sbjct: 222 SVFQMLLLSNSFWNVLVYSIRMPEFRTELCNLARQCAIYTSRRRVRAHQY 271
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,061,550
Number of Sequences: 59808
Number of extensions: 315761
Number of successful extensions: 877
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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