Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_P17
(645 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_58963| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_35738| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_59010| Best HMM Match : rve (HMM E-Value=0.0052) 29 2.4
SB_47817| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_34780| Best HMM Match : Pox_A32 (HMM E-Value=0.018) 29 3.2
SB_48415| Best HMM Match : Pox_A32 (HMM E-Value=0.014) 29 4.3
SB_42110| Best HMM Match : Pox_A32 (HMM E-Value=0.034) 29 4.3
SB_10503| Best HMM Match : Ribosomal_60s (HMM E-Value=0.46) 29 4.3
SB_545| Best HMM Match : Pox_A32 (HMM E-Value=0.024) 29 4.3
SB_52974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_45055| Best HMM Match : Ribosomal_60s (HMM E-Value=0.46) 29 4.3
SB_44110| Best HMM Match : DUF489 (HMM E-Value=3.3) 29 4.3
SB_18995| Best HMM Match : rve (HMM E-Value=0.0012) 29 4.3
SB_25631| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_2035| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_47221| Best HMM Match : Pox_A32 (HMM E-Value=0.04) 28 5.7
SB_18915| Best HMM Match : Pox_A32 (HMM E-Value=0.052) 28 5.7
SB_40358| Best HMM Match : Pox_A32 (HMM E-Value=0.058) 28 7.5
SB_27943| Best HMM Match : Pox_A32 (HMM E-Value=0.047) 28 7.5
SB_3752| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_18147| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_10027| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.31) 27 9.9
SB_4600| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_56578| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_47384| Best HMM Match : Pox_A32 (HMM E-Value=0.029) 27 9.9
SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_29316| Best HMM Match : Pox_A32 (HMM E-Value=0.026) 27 9.9
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 85.8 bits (203), Expect = 3e-17
Identities = 39/69 (56%), Positives = 51/69 (73%)
Frame = -3
Query: 454 MRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGRE 275
MRYVA YLLA LG P+A D++ IL SVGIE+D E+L KVI+E +GK V++ I AG+
Sbjct: 650 MRYVAAYLLATLGNNKNPSAKDIKGILDSVGIESDMERLNKVISELSGKSVDEIIQAGKS 709
Query: 274 KLXSMPVGG 248
KL ++P GG
Sbjct: 710 KLATVPTGG 718
>SB_58963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXN 314
TP+ AD++ IL G E EK+K ++TE N
Sbjct: 106 TPSKADMKAILHDYGAELSEEKMKDLLTENN 136
>SB_35738| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1186
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 430 LAVLGGKNTPAAADVEKILSSVGIEADAEKLKK 332
+A L NTP+ AD++ IL G E EK+K+
Sbjct: 277 IAALVVFNTPSKADIKAILHDYGAELSEEKMKE 309
>SB_59010| Best HMM Match : rve (HMM E-Value=0.0052)
Length = 935
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGREKLXSMPVGG 248
TP+ AD++ IL G E EK+K+ + K+ E S+ GG
Sbjct: 308 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKNFSNRTMMSDECFESLLEGG 360
>SB_47817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 430 LAVLGGKNTPAAADVEKILSSVGIEADAEKLKK 332
+A L NTP+ AD++ IL G E EK+K+
Sbjct: 243 IAALVVFNTPSKADMKAILHDYGAELSEEKMKE 275
>SB_34780| Best HMM Match : Pox_A32 (HMM E-Value=0.018)
Length = 625
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 430 LAVLGGKNTPAAADVEKILSSVGIEADAEKLKK 332
+A L NTP+ AD++ IL G E EK+K+
Sbjct: 256 IAALVVFNTPSKADMKAILHDYGAELSEEKMKE 288
>SB_48415| Best HMM Match : Pox_A32 (HMM E-Value=0.014)
Length = 988
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGREKLXSMPVGG 248
TP+ AD++ IL G E EK+K+ + K E S+ GG
Sbjct: 556 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKKFSNRTMMSDECFESLLEGG 608
>SB_42110| Best HMM Match : Pox_A32 (HMM E-Value=0.034)
Length = 720
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGREKLXSMPVGG 248
TP+ AD++ IL G E EK+K+ + K E S+ GG
Sbjct: 273 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKKFSNRTMMSDECFESLLEGG 325
>SB_10503| Best HMM Match : Ribosomal_60s (HMM E-Value=0.46)
Length = 787
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGREKLXSMPVGG 248
TP+ AD++ IL G E EK+K+ + K E S+ GG
Sbjct: 559 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKKFSNRTMMSDECFESLLEGG 611
>SB_545| Best HMM Match : Pox_A32 (HMM E-Value=0.024)
Length = 454
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGREKLXSMPVGG 248
TP+ AD++ IL G E EK+K+ + K E S+ GG
Sbjct: 252 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKKFSNRTMMSDECFESLLEGG 304
>SB_52974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIA 287
TP+ AD++ IL G E EK+K+ + K + IA
Sbjct: 148 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKKFSKFIA 187
>SB_45055| Best HMM Match : Ribosomal_60s (HMM E-Value=0.46)
Length = 741
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGREKLXSMPVGG 248
TP+ AD++ IL G E EK+K+ + K E S+ GG
Sbjct: 80 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKKFSNRTMMSDECFESLLEGG 132
>SB_44110| Best HMM Match : DUF489 (HMM E-Value=3.3)
Length = 491
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGK 308
TP+ AD++ IL G E EK+K+ + N K
Sbjct: 447 TPSKADMKAILHDYGAELSEEKMKEYMKALNTK 479
>SB_18995| Best HMM Match : rve (HMM E-Value=0.0012)
Length = 1225
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVI 326
TP+ AD++ IL G+E EK+K+ +
Sbjct: 416 TPSKADMKAILHDYGVELSEEKMKEAL 442
>SB_25631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVE 299
TP+ AD++ IL G E EK+K+ + K +E
Sbjct: 519 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKKLE 554
>SB_2035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGREKLXSMPVGGG 245
TP+ AD++ IL G E EK+K+ + K + R VGGG
Sbjct: 49 TPSKADMKAILHDYGSELSEEKMKEYMKALKTKKFSKLEFCLRYPYTIALVGGG 102
>SB_47221| Best HMM Match : Pox_A32 (HMM E-Value=0.04)
Length = 263
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGREKLXSMPVGG 248
TP+ AD++ IL G E EK+K+ K E S+ GG
Sbjct: 148 TPSKADMKAILHDYGAELSEEKMKEYTKALKTKKFSNRTMMSDEYFESLLEGG 200
>SB_18915| Best HMM Match : Pox_A32 (HMM E-Value=0.052)
Length = 430
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKK 332
TP+ AD++ IL G E AEK+K+
Sbjct: 298 TPSKADMKAILHDYGAELSAEKMKE 322
>SB_40358| Best HMM Match : Pox_A32 (HMM E-Value=0.058)
Length = 874
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGREKLXSMPVGG 248
TP+ AD++ IL G E EK+K+ + K + S+ GG
Sbjct: 423 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKKFSNRTMMSDDYFESLLEGG 475
>SB_27943| Best HMM Match : Pox_A32 (HMM E-Value=0.047)
Length = 983
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGREKLXSMPVGG 248
TP+ AD++ IL G E EK+K+ + K E S GG
Sbjct: 447 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKKFSNRTMMSDECFESFLEGG 499
>SB_3752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1048
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKK 332
TP+ AD++ IL G+E EK+K+
Sbjct: 544 TPSKADMKAILHDYGVELSEEKMKE 568
>SB_18147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVI 326
TP+ AD++ IL G E EK+K+ I
Sbjct: 28 TPSKADMKAILHDYGAELSEEKMKEYI 54
>SB_10027| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.31)
Length = 635
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 430 LAVLGGKNTPAAADVEKILSSVGIEADAEKLKK 332
+AVL TP AD++ IL G E EK+K+
Sbjct: 375 IAVLVDFYTPRKADMKAILHDYGAELSEEKMKE 407
>SB_4600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGKDV 302
TP+ AD++ IL G E EK+K+ + K V
Sbjct: 666 TPSKADMKAILHDYGAELSEEKMKEYMKALKTKKV 700
>SB_56578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVI 326
TP+ AD++ IL G E EK+K+ I
Sbjct: 443 TPSKADMKAILHDYGAELSEEKMKEYI 469
>SB_47384| Best HMM Match : Pox_A32 (HMM E-Value=0.029)
Length = 327
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGREKLXSMPVGGG 245
TP+ AD++ IL G E EK+K+ + K E S GGG
Sbjct: 148 TPSKADMKAILHDYGAELSEEKMKESMKALKTKKFLNRTMMCDECFESFLEGGG 201
>SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2391
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVITEXNGK 308
TP+ AD++ IL G E EK+K+ + + K
Sbjct: 1482 TPSKADMKAILHDYGAELSEEKMKEYMKDLKTK 1514
>SB_29316| Best HMM Match : Pox_A32 (HMM E-Value=0.026)
Length = 288
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 406 TPAAADVEKILSSVGIEADAEKLKKVI 326
TP+ AD++ IL G E EK+K+ I
Sbjct: 148 TPSKADMKAILHDYGAELSEEKMKEYI 174
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,973,639
Number of Sequences: 59808
Number of extensions: 123884
Number of successful extensions: 463
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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