Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_P17
(645 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 92 1e-18
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 92 1e-18
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 92 1e-18
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 92 1e-18
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 92 1e-18
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 92 1e-18
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 92 1e-18
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 92 1e-18
BC009431-1|AAH09431.1| 559|Homo sapiens family with sequence si... 32 2.0
AY358207-1|AAQ88574.1| 559|Homo sapiens WTNF5791 protein. 32 2.0
AK054664-1|BAB70787.1| 559|Homo sapiens protein ( Homo sapiens ... 32 2.0
X16351-1|CAA34400.1| 288|Homo sapiens SHBG related protein (288... 31 2.7
X16349-1|CAA34398.1| 402|Homo sapiens sex hormone-binding globu... 31 2.7
X05885-1|CAA29309.1| 356|Homo sapiens protein ( Human mRNA for ... 31 2.7
X05792-1|CAA29234.1| 282|Homo sapiens sex steroid-binding prote... 31 2.7
X05403-1|CAA28987.1| 381|Homo sapiens protein ( Human mRNA for ... 31 2.7
M31651-1|AAC18778.1| 402|Homo sapiens sex hormone-binding globu... 31 2.7
BC112186-1|AAI12187.1| 402|Homo sapiens sex hormone-binding glo... 31 2.7
BC101785-1|AAI01786.1| 402|Homo sapiens sex hormone-binding glo... 31 2.7
BC069597-1|AAH69597.1| 401|Homo sapiens SHBG protein protein. 31 2.7
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 92.3 bits (219), Expect = 1e-18
Identities = 43/69 (62%), Positives = 54/69 (78%)
Frame = -3
Query: 454 MRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGRE 275
MRYVA YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+E NGK++E IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 274 KLXSMPVGG 248
KL S+P GG
Sbjct: 61 KLASVPAGG 69
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 92.3 bits (219), Expect = 1e-18
Identities = 43/69 (62%), Positives = 54/69 (78%)
Frame = -3
Query: 454 MRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGRE 275
MRYVA YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+E NGK++E IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 274 KLXSMPVGG 248
KL S+P GG
Sbjct: 61 KLASVPAGG 69
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 92.3 bits (219), Expect = 1e-18
Identities = 43/69 (62%), Positives = 54/69 (78%)
Frame = -3
Query: 454 MRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGRE 275
MRYVA YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+E NGK++E IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 274 KLXSMPVGG 248
KL S+P GG
Sbjct: 61 KLASVPAGG 69
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 92.3 bits (219), Expect = 1e-18
Identities = 43/69 (62%), Positives = 54/69 (78%)
Frame = -3
Query: 454 MRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGRE 275
MRYVA YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+E NGK++E IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 274 KLXSMPVGG 248
KL S+P GG
Sbjct: 61 KLASVPAGG 69
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 92.3 bits (219), Expect = 1e-18
Identities = 43/69 (62%), Positives = 54/69 (78%)
Frame = -3
Query: 454 MRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGRE 275
MRYVA YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+E NGK++E IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 274 KLXSMPVGG 248
KL S+P GG
Sbjct: 61 KLASVPAGG 69
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 92.3 bits (219), Expect = 1e-18
Identities = 43/69 (62%), Positives = 54/69 (78%)
Frame = -3
Query: 454 MRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGRE 275
MRYVA YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+E NGK++E IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 274 KLXSMPVGG 248
KL S+P GG
Sbjct: 61 KLASVPAGG 69
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 92.3 bits (219), Expect = 1e-18
Identities = 43/69 (62%), Positives = 54/69 (78%)
Frame = -3
Query: 454 MRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGRE 275
MRYVA YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+E NGK++E IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 274 KLXSMPVGG 248
KL S+P GG
Sbjct: 61 KLASVPAGG 69
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 92.3 bits (219), Expect = 1e-18
Identities = 43/69 (62%), Positives = 54/69 (78%)
Frame = -3
Query: 454 MRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGRE 275
MRYVA YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+E NGK++E IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 274 KLXSMPVGG 248
KL S+P GG
Sbjct: 61 KLASVPAGG 69
>BC009431-1|AAH09431.1| 559|Homo sapiens family with sequence
similarity 55, member C protein.
Length = 559
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -3
Query: 481 RFVSIRX*KMRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKV 329
RF ++ ++ YVA L ++GGKNT A V S+ +E +L+ +
Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463
>AY358207-1|AAQ88574.1| 559|Homo sapiens WTNF5791 protein.
Length = 559
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -3
Query: 481 RFVSIRX*KMRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKV 329
RF ++ ++ YVA L ++GGKNT A V S+ +E +L+ +
Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463
>AK054664-1|BAB70787.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ30102 fis, clone BNGH41000137, weakly similar to
BRUSH BORDER 61.9 KD PROTEIN PRECURSOR. ).
Length = 559
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -3
Query: 481 RFVSIRX*KMRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKV 329
RF ++ ++ YVA L ++GGKNT A V S+ +E +L+ +
Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463
>X16351-1|CAA34400.1| 288|Homo sapiens SHBG related protein (288
AA) protein.
Length = 288
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 351 SASIPTELRIFSTSAAAGVFLPPSTASKY 437
SAS PT LR + G+FLPP T +++
Sbjct: 202 SASAPTSLRSCDVESNPGIFLPPGTQAEF 230
>X16349-1|CAA34398.1| 402|Homo sapiens sex hormone-binding globulin
(SHBG) protein.
Length = 402
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 351 SASIPTELRIFSTSAAAGVFLPPSTASKY 437
SAS PT LR + G+FLPP T +++
Sbjct: 207 SASAPTSLRSCDVESNPGIFLPPGTQAEF 235
>X05885-1|CAA29309.1| 356|Homo sapiens protein ( Human mRNA for sex
hormon binding globulin (SHBG). ).
Length = 356
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 351 SASIPTELRIFSTSAAAGVFLPPSTASKY 437
SAS PT LR + G+FLPP T +++
Sbjct: 161 SASAPTSLRSCDVESNPGIFLPPGTQAEF 189
>X05792-1|CAA29234.1| 282|Homo sapiens sex steroid-binding protein
protein.
Length = 282
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 351 SASIPTELRIFSTSAAAGVFLPPSTASKY 437
SAS PT LR + G+FLPP T +++
Sbjct: 87 SASAPTSLRSCDVESNPGIFLPPGTQAEF 115
>X05403-1|CAA28987.1| 381|Homo sapiens protein ( Human mRNA for sex
hormone-binding globulin (SHBG). ).
Length = 381
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 351 SASIPTELRIFSTSAAAGVFLPPSTASKY 437
SAS PT LR + G+FLPP T +++
Sbjct: 186 SASAPTSLRSCDVESNPGIFLPPGTQAEF 214
>M31651-1|AAC18778.1| 402|Homo sapiens sex hormone-binding globulin
protein.
Length = 402
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 351 SASIPTELRIFSTSAAAGVFLPPSTASKY 437
SAS PT LR + G+FLPP T +++
Sbjct: 207 SASAPTSLRSCDVESNPGIFLPPGTQAEF 235
>BC112186-1|AAI12187.1| 402|Homo sapiens sex hormone-binding
globulin protein.
Length = 402
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 351 SASIPTELRIFSTSAAAGVFLPPSTASKY 437
SAS PT LR + G+FLPP T +++
Sbjct: 207 SASAPTSLRSCDVESNPGIFLPPGTQAEF 235
>BC101785-1|AAI01786.1| 402|Homo sapiens sex hormone-binding
globulin protein.
Length = 402
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 351 SASIPTELRIFSTSAAAGVFLPPSTASKY 437
SAS PT LR + G+FLPP T +++
Sbjct: 207 SASAPTSLRSCDVESNPGIFLPPGTQAEF 235
>BC069597-1|AAH69597.1| 401|Homo sapiens SHBG protein protein.
Length = 401
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 351 SASIPTELRIFSTSAAAGVFLPPSTASKY 437
SAS PT LR + G+FLPP T +++
Sbjct: 206 SASAPTSLRSCDVESNPGIFLPPGTQAEF 234
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,801,412
Number of Sequences: 237096
Number of extensions: 608734
Number of successful extensions: 1115
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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