Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_P17
         (645 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...   102   5e-22
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...   102   5e-22
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...   102   5e-22
X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...   101   6e-22
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...   101   6e-22
AY058297-1|AAL13526.1|  543|Drosophila melanogaster GH05942p pro...    31   1.3  
AE014296-1660|AAF50267.2|  543|Drosophila melanogaster CG3529-PB...    31   1.3  
Z29361-1|CAA82545.1|  644|Drosophila melanogaster BTD protein.         29   7.1  
AY069572-1|AAL39717.1|  510|Drosophila melanogaster LD31122p pro...    29   7.1  
AY060416-1|AAL25455.1|  358|Drosophila melanogaster LD37618p pro...    29   7.1  
AE014298-1363|AAF46518.1|  644|Drosophila melanogaster CG12653-P...    29   7.1  
AE014296-2923|AAF49329.1|  680|Drosophila melanogaster CG6311-PB...    29   7.1  

>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score =  102 bits (244), Expect = 5e-22
 Identities = 49/70 (70%), Positives = 57/70 (81%)
 Frame = -3

Query: 454 MRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGRE 275
           MRYVA YLLAVLGGK++PA +D+EKILSSVG+E DAE+L KVI E  GK ++  I  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 274 KLXSMPVGGG 245
           KL SMPVGGG
Sbjct: 61  KLSSMPVGGG 70


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score =  102 bits (244), Expect = 5e-22
 Identities = 49/70 (70%), Positives = 57/70 (81%)
 Frame = -3

Query: 454 MRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGRE 275
           MRYVA YLLAVLGGK++PA +D+EKILSSVG+E DAE+L KVI E  GK ++  I  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 274 KLXSMPVGGG 245
           KL SMPVGGG
Sbjct: 61  KLSSMPVGGG 70


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score =  102 bits (244), Expect = 5e-22
 Identities = 49/70 (70%), Positives = 57/70 (81%)
 Frame = -3

Query: 454 MRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGRE 275
           MRYVA YLLAVLGGK++PA +D+EKILSSVG+E DAE+L KVI E  GK ++  I  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 274 KLXSMPVGGG 245
           KL SMPVGGG
Sbjct: 61  KLSSMPVGGG 70


>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score =  101 bits (243), Expect = 6e-22
 Identities = 49/70 (70%), Positives = 56/70 (80%)
 Frame = -3

Query: 454 MRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGRE 275
           MRYVA YLLAVLGGK++PA  D+EKILSSVG+E DAE+L KVI E  GK ++  I  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 274 KLXSMPVGGG 245
           KL SMPVGGG
Sbjct: 61  KLSSMPVGGG 70


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score =  101 bits (243), Expect = 6e-22
 Identities = 49/70 (70%), Positives = 56/70 (80%)
 Frame = -3

Query: 454 MRYVAXYLLAVLGGKNTPAAADVEKILSSVGIEADAEKLKKVITEXNGKDVEQXIAAGRE 275
           MRYVA YLLAVLGGK++PA  D+EKILSSVG+E DAE+L KVI E  GK ++  I  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 274 KLXSMPVGGG 245
           KL SMPVGGG
Sbjct: 61  KLSSMPVGGG 70


>AY058297-1|AAL13526.1|  543|Drosophila melanogaster GH05942p
           protein.
          Length = 543

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -3

Query: 433 LLAVLGGKNTPAAADVEKILSSVGIEADAEK 341
           L+ ++G KN P AA  EK+LS + I ADA K
Sbjct: 105 LVKLIGPKNDPPAAMQEKVLSLIQIWADAFK 135


>AE014296-1660|AAF50267.2|  543|Drosophila melanogaster CG3529-PB
           protein.
          Length = 543

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -3

Query: 433 LLAVLGGKNTPAAADVEKILSSVGIEADAEK 341
           L+ ++G KN P AA  EK+LS + I ADA K
Sbjct: 105 LVKLIGPKNDPPAAMQEKVLSLIQIWADAFK 135


>Z29361-1|CAA82545.1|  644|Drosophila melanogaster BTD protein.
          Length = 644

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = +3

Query: 276 SRPAAIXCSTSLPLXSVITFLSFSASASIPTELRIFSTSAAAGVFLPPSTAS 431
           S P++   S S+      +F S SAS S PT      T+AAAG      T+S
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTSS 199


>AY069572-1|AAL39717.1|  510|Drosophila melanogaster LD31122p
           protein.
          Length = 510

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +3

Query: 246 PPPTGIDXSFSRPAAIXCSTSLPLXSVITFLSFSASASIPTELRIFSTSAAA 401
           PPP GI+    + + +     LPL  + T  + S+S++  T   I STSAAA
Sbjct: 412 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 460


>AY060416-1|AAL25455.1|  358|Drosophila melanogaster LD37618p
           protein.
          Length = 358

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +3

Query: 246 PPPTGIDXSFSRPAAIXCSTSLPLXSVITFLSFSASASIPTELRIFSTSAAA 401
           PPP GI+    + + +     LPL  + T  + S+S++  T   I STSAAA
Sbjct: 260 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 308


>AE014298-1363|AAF46518.1|  644|Drosophila melanogaster CG12653-PA
           protein.
          Length = 644

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = +3

Query: 276 SRPAAIXCSTSLPLXSVITFLSFSASASIPTELRIFSTSAAAGVFLPPSTAS 431
           S P++   S S+      +F S SAS S PT      T+AAAG      T+S
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTSS 199


>AE014296-2923|AAF49329.1|  680|Drosophila melanogaster CG6311-PB
           protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +3

Query: 246 PPPTGIDXSFSRPAAIXCSTSLPLXSVITFLSFSASASIPTELRIFSTSAAA 401
           PPP GI+    + + +     LPL  + T  + S+S++  T   I STSAAA
Sbjct: 582 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 630


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,378,609
Number of Sequences: 53049
Number of extensions: 191750
Number of successful extensions: 597
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)