Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_P11
         (460 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6EPG0 Cluster: Putative uncharacterized protein P0657H...    33   3.9  
UniRef50_UPI0000DBF205 Cluster: UPI0000DBF205 related cluster; n...    32   5.2  
UniRef50_A0C9W4 Cluster: Chromosome undetermined scaffold_16, wh...    31   9.0  
UniRef50_Q9CLX3 Cluster: Uncharacterized protein PM1076; n=1; Pa...    31   9.0  

>UniRef50_Q6EPG0 Cluster: Putative uncharacterized protein
           P0657H12.12; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0657H12.12 - Oryza sativa subsp. japonica (Rice)
          Length = 150

 Score = 32.7 bits (71), Expect = 3.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 348 NRXVYPHPRPLTHTHRR*PHTQAHRTS 268
           N  ++PHPR  T    R PH Q HRT+
Sbjct: 32  NAPIHPHPREPTARRHRTPHPQPHRTT 58


>UniRef50_UPI0000DBF205 Cluster: UPI0000DBF205 related cluster; n=2;
           Eutheria|Rep: UPI0000DBF205 UniRef100 entry - Rattus
           norvegicus
          Length = 371

 Score = 32.3 bits (70), Expect = 5.2
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
 Frame = -2

Query: 351 LNRXVYPHPRPLTHTH-RR*PHTQAHRTSSREGKIFTH-----DTDKHVXY*TLLPLKSL 190
           L+  ++ HP PL+HTH     HT  H  +S +G++ +       T  H+   T L   S 
Sbjct: 98  LSHHIHRHPPPLSHTHTHTHTHTHTHTHTSIQGQVSSDLRACMCTHVHIDSHTTLSTYSC 157

Query: 189 DFFITKTLL 163
           D     TLL
Sbjct: 158 DHCSPNTLL 166


>UniRef50_A0C9W4 Cluster: Chromosome undetermined scaffold_16, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_16, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 5605

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
 Frame = -1

Query: 202  AKVLGLFHHKNTIMHK**---HKRCKLTLKHTIISQFHPRFSHGHVVFVKIRVGS 47
            AK   LF   +TI+ K     H   K  L+  + S+F  +F +GHVV +++R+GS
Sbjct: 3984 AKASVLFGQDSTIVEKEFKVKHNMIKDYLRFVVGSEFGYKFFNGHVVNIQLRMGS 4038


>UniRef50_Q9CLX3 Cluster: Uncharacterized protein PM1076; n=1;
           Pasteurella multocida|Rep: Uncharacterized protein
           PM1076 - Pasteurella multocida
          Length = 81

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 145 KRCKLTLKHTIISQFHPRFSHGHVVFVKIRVGSC 44
           KRC   +KH++    H  F H  V+F+ +R+G C
Sbjct: 18  KRCFQLIKHSVYKILHAVFYH-MVLFISLRLGKC 50


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,110,419
Number of Sequences: 1657284
Number of extensions: 5799864
Number of successful extensions: 11238
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11210
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)