Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_P11
(460 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 24 0.59
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 24 0.59
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 24 0.59
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 24 0.59
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 24 0.59
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 24 0.59
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 24 0.59
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 24 0.59
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 24 0.78
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 20 9.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 20 9.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 20 9.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 20 9.6
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 0.59
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 357 PSLNRXVYPHPRPLTHTHRR*PHTQAHRTSS 265
P++ P+ L TH + P+TQ H ++S
Sbjct: 68 PTMGDYTQLQPQRLASTHLQSPNTQTHPSAS 98
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 0.59
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 357 PSLNRXVYPHPRPLTHTHRR*PHTQAHRTSS 265
P++ P+ L TH + P+TQ H ++S
Sbjct: 68 PTMGDYTQLQPQRLASTHLQSPNTQTHPSAS 98
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 24.2 bits (50), Expect = 0.59
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 357 PSLNRXVYPHPRPLTHTHRR*PHTQAHRTSS 265
P++ P+ L TH + P+TQ H ++S
Sbjct: 68 PTMGDYTQLQPQRLASTHLQSPNTQTHPSAS 98
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 0.59
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 357 PSLNRXVYPHPRPLTHTHRR*PHTQAHRTSS 265
P++ P+ L TH + P+TQ H ++S
Sbjct: 68 PTMGDYTQLQPQRLASTHLQSPNTQTHPSAS 98
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 24.2 bits (50), Expect = 0.59
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 357 PSLNRXVYPHPRPLTHTHRR*PHTQAHRTSS 265
P++ P+ L TH + P+TQ H ++S
Sbjct: 68 PTMGDYTQLQPQRLASTHLQSPNTQTHPSAS 98
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 24.2 bits (50), Expect = 0.59
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 357 PSLNRXVYPHPRPLTHTHRR*PHTQAHRTSS 265
P++ P+ L TH + P+TQ H ++S
Sbjct: 24 PTMGDYTQLQPQRLASTHLQSPNTQTHPSAS 54
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 24.2 bits (50), Expect = 0.59
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 357 PSLNRXVYPHPRPLTHTHRR*PHTQAHRTSS 265
P++ P+ L TH + P+TQ H ++S
Sbjct: 68 PTMGDYTQLQPQRLASTHLQSPNTQTHPSAS 98
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 24.2 bits (50), Expect = 0.59
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 357 PSLNRXVYPHPRPLTHTHRR*PHTQAHRTSS 265
P++ P+ L TH + P+TQ H ++S
Sbjct: 68 PTMGDYTQLQPQRLASTHLQSPNTQTHPSAS 98
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.8 bits (49), Expect = 0.78
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 357 PSLNRXVYPHPRPLTHTHRR*PHTQAHRTSS 265
P++ P+ L TH + P+TQ H ++S
Sbjct: 68 PTMGDYTQLQPQRLAPTHLQSPNTQTHPSAS 98
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 9.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 302 DVNHTHKRTAPP 267
DV+ TH R PP
Sbjct: 650 DVHQTHMRIRPP 661
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 9.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 302 DVNHTHKRTAPP 267
DV+ TH R PP
Sbjct: 650 DVHQTHMRIRPP 661
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 20.2 bits (40), Expect = 9.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 302 DVNHTHKRTAPP 267
DV+ TH R PP
Sbjct: 650 DVHQTHMRIRPP 661
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 20.2 bits (40), Expect = 9.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 302 DVNHTHKRTAPP 267
DV+ TH R PP
Sbjct: 650 DVHQTHMRIRPP 661
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,884
Number of Sequences: 336
Number of extensions: 1702
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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