Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_P11
         (460 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56963-2|AAB38119.2|  326|Caenorhabditis elegans Neuropeptide-li...    29   1.6  
Z69361-1|CAE17943.1|  468|Caenorhabditis elegans Hypothetical pr...    28   3.8  

>U56963-2|AAB38119.2|  326|Caenorhabditis elegans Neuropeptide-like
           protein protein16 protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = -2

Query: 333 PHPRPLTHTHRR*PHTQAHRTSSREG----KIFTHDTDKHV 223
           PHP P +HT +R   T+ HR    EG    K  TH  + H+
Sbjct: 99  PHPDPPSHTAKR--STEHHRVKRSEGHPHEKKATHSPEGHI 137


>Z69361-1|CAE17943.1|  468|Caenorhabditis elegans Hypothetical
           protein T13H10.2 protein.
          Length = 468

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 120 CFSVNLQRLCYHLCIIVF 173
           CFS+ L  L Y LC+I+F
Sbjct: 33  CFSIPLHTLNYFLCVIIF 50


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,944,871
Number of Sequences: 27780
Number of extensions: 148218
Number of successful extensions: 281
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)