Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_P10
         (382 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical ...    50   6e-07
L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical pr...    40   5e-04
L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical pr...    40   5e-04
AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid deplet...    26   7.9  

>AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical
           protein F32D1.2 protein.
          Length = 54

 Score = 50.0 bits (114), Expect = 6e-07
 Identities = 21/47 (44%), Positives = 31/47 (65%)
 Frame = +1

Query: 91  MSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPW 231
           M AWR AGL Y+ YS IAA++ R+  KQ     A+K+ E+ +++T W
Sbjct: 1   MVAWRAAGLNYVRYSQIAAEITRKCTKQVGGKAAVKKPEATLKITTW 47


>L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical
           protein ZC262.5 protein.
          Length = 54

 Score = 40.3 bits (90), Expect = 5e-04
 Identities = 19/47 (40%), Positives = 29/47 (61%)
 Frame = +1

Query: 91  MSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPW 231
           M AWR AGL Y+ YS IAA+V+R+  K       +K+ ++ ++ T W
Sbjct: 1   MVAWRAAGLNYVRYSQIAAQVVRQCTK---GGANVKKPQATLKTTAW 44


>L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical
           protein R05D3.6 protein.
          Length = 54

 Score = 40.3 bits (90), Expect = 5e-04
 Identities = 19/47 (40%), Positives = 29/47 (61%)
 Frame = +1

Query: 91  MSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPW 231
           M AWR AGL Y+ YS IAA+V+R+  K       +K+ ++ ++ T W
Sbjct: 1   MVAWRAAGLNYVRYSQIAAQVVRQCTK---GGANVKKPQATLKTTAW 44


>AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid depleted
           protein 3 protein.
          Length = 1599

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 208 SHVRVTPWGQRTTCTPPESCSKV 276
           +HV+ TPW Q T  TP ++  ++
Sbjct: 75  THVKSTPWLQLTAATPTQTAVRL 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,003,641
Number of Sequences: 27780
Number of extensions: 147274
Number of successful extensions: 369
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)