Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_P09
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   6.4  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   6.4  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   6.4  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 516 EIRKIAQKSALCSFTQTN*LKFYKV 442
           +IRK+AQ    C F     L +Y V
Sbjct: 336 QIRKVAQAQRQCVFASEANLSYYSV 360


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 516 EIRKIAQKSALCSFTQTN*LKFYKV 442
           +IRK+AQ    C F     L +Y V
Sbjct: 336 QIRKVAQAQRQCVFASEANLSYYSV 360


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -3

Query: 573 YFY*LVPKILLIMEFYNKLEIRKIAQKSALCSF--TQTN*LKFYKVLIIYK 427
           +FY  V K+  + + Y KLE++   +++ L  F  T T  + F+   ++ K
Sbjct: 409 FFYEDVNKVETVTDAYIKLELKSPIKRNKLMRFMVTCTERMTFFVYYVMSK 459


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,448
Number of Sequences: 2352
Number of extensions: 10479
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)