Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_P09
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z68114-8|CAA92162.1|  317|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z22174-2|CAA80130.2|  410|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z83218-6|CAI58632.1|  273|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical
           protein C34F6.8 protein.
          Length = 435

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +3

Query: 192 FDYVMFPSMPLYI*ETNVIIVECKSRY*KIYSKTYLFSYQLKLKQN 329
           F Y +    PLY+   N I+ +   R+  I+   Y   Y+   K N
Sbjct: 219 FQYALMKQWPLYLSTKNTILKKYDGRFKDIFQDIYEKKYEADFKNN 264


>Z68114-8|CAA92162.1|  317|Caenorhabditis elegans Hypothetical
           protein F17A2.11 protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 475 YPNKLIKILQSTNYLQIVYVQYLPKYTKTTRTV 377
           YP  L  +  +  +L +V V+Y PKY +T R V
Sbjct: 10  YPIFLALVFPTQIFLFVVVVKYSPKYMQTLRNV 42


>Z22174-2|CAA80130.2|  410|Caenorhabditis elegans Hypothetical
           protein K01B6.3 protein.
          Length = 410

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +3

Query: 507 SESLVYC-KIPLLIKFLELISKNMNFLF 587
           +E L+YC K PLLI+F+ +IS  + FLF
Sbjct: 180 NEELIYCNKNPLLIRFVAIIS--LIFLF 205


>Z83218-6|CAI58632.1|  273|Caenorhabditis elegans Hypothetical
           protein C31A11.10 protein.
          Length = 273

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 387 VVFVYLGKYCTYTICK*LVLCKILINLFG*SYIKHFSVRSSESLVYCK 530
           ++F ++G + T           I++ LF   Y+K   V+SS SL+Y K
Sbjct: 1   MLFFFVGSFLTLLFAITASFLNIML-LFSILYLKRIPVKSSMSLIYYK 47


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,917,430
Number of Sequences: 27780
Number of extensions: 242245
Number of successful extensions: 387
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)