Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_P07
(458 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 107 1e-23
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 101 1e-21
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 101 1e-21
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 98 1e-20
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 96 4e-20
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 96 4e-20
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 96 4e-20
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 96 4e-20
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 93 4e-19
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 93 4e-19
BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domai... 85 8e-17
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 84 3e-16
AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid b... 58 1e-08
BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein. 52 7e-07
BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein. 52 7e-07
BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein. 51 2e-06
BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domai... 51 2e-06
AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domai... 51 2e-06
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 50 5e-06
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 50 5e-06
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 50 5e-06
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 50 5e-06
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 50 5e-06
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 50 5e-06
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 50 5e-06
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 50 5e-06
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 50 5e-06
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 48 2e-05
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 48 2e-05
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 48 2e-05
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 48 2e-05
BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for IM... 43 4e-04
BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein. 41 0.002
AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domai... 41 0.002
AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domai... 41 0.002
AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens ... 41 0.002
AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens ... 41 0.002
AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein. 39 0.009
D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein. 35 0.12
BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domai... 35 0.12
AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domai... 35 0.12
U79569-1|AAD00321.1| 269|Homo sapiens no arches protein. 34 0.27
EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and polyadenyl... 34 0.27
CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein. 34 0.27
BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein. 34 0.27
BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and polyadenyl... 34 0.27
M80482-1|AAA59998.1| 969|Homo sapiens subtilisin-like protease ... 33 0.62
D87995-1|BAA21793.1| 956|Homo sapiens PACE4A-II protein. 33 0.62
D87994-1|BAA21792.1| 962|Homo sapiens PACE4E-II protein. 33 0.62
D87993-1|BAA21791.1| 975|Homo sapiens PACE4E-I protein. 33 0.62
AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein pr... 33 0.62
AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens ... 33 0.62
AB208955-1|BAD92192.1| 800|Homo sapiens paired basic amino acid... 33 0.62
AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein. 33 0.62
AB001914-4|BAA21627.1| 975|Homo sapiens PACE4E-I protein. 33 0.62
AB001914-3|BAA21626.1| 962|Homo sapiens PACE4E-II protein. 33 0.62
AB001914-2|BAA21625.1| 956|Homo sapiens PACE4A-II protein. 33 0.62
AB001914-1|BAA21624.1| 969|Homo sapiens PACE4A-I protein. 33 0.62
M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein. 32 0.82
DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein. 32 0.82
BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein. 32 0.82
AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular... 32 0.82
AK127846-1|BAC87158.1| 483|Homo sapiens protein ( Homo sapiens ... 32 0.82
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 32 0.82
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 32 0.82
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 32 0.82
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 32 0.82
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 32 0.82
AF074086-5|AAD21095.2| 666|Homo sapiens gag protein. 32 0.82
AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein. 32 0.82
AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding ... 32 0.82
AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding ... 32 0.82
BC105930-1|AAI05931.1| 651|Homo sapiens ZNF816A protein protein. 32 1.1
BC105740-1|AAI05741.1| 652|Homo sapiens ZNF816A protein protein. 32 1.1
BC105739-1|AAI05740.1| 651|Homo sapiens ZNF816A protein protein. 32 1.1
AK091495-1|BAC03676.1| 212|Homo sapiens protein ( Homo sapiens ... 32 1.1
AK128465-1|BAC87453.1| 310|Homo sapiens protein ( Homo sapiens ... 31 1.4
X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor rec... 31 2.5
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 31 2.5
M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor rec... 31 2.5
M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor rec... 31 2.5
M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein. 31 2.5
M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor rec... 31 2.5
M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor nec... 31 2.5
BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domai... 31 2.5
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 31 2.5
BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor r... 31 2.5
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 31 2.5
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 31 2.5
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 31 2.5
AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor r... 31 2.5
AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein pr... 31 2.5
AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein. 31 2.5
AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein. 31 2.5
Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein. 29 5.8
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 29 5.8
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 29 5.8
L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1... 29 5.8
D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein. 29 5.8
D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternativel... 29 5.8
BC119643-1|AAI19644.1| 370|Homo sapiens keratin associated prot... 29 5.8
BC109322-1|AAI09323.1| 320|Homo sapiens nucleotide binding prot... 29 5.8
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 29 5.8
BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type a... 29 5.8
BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein. 29 5.8
BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein. 29 5.8
BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein. 29 5.8
BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein. 29 5.8
BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for IM... 29 5.8
AK223204-1|BAD96924.1| 320|Homo sapiens nucleotide binding prot... 29 5.8
AK128650-1|BAC87549.1| 1662|Homo sapiens protein ( Homo sapiens ... 29 5.8
AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein. 29 5.8
AJ626860-1|CAF25187.1| 3585|Homo sapiens VPS13C-1B protein protein. 29 5.8
AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein. 29 5.8
AJ608770-1|CAE75582.1| 3710|Homo sapiens VPS13C-1A protein protein. 29 5.8
AF307451-1|AAK30049.1| 578|Homo sapiens Cat eye syndrome critic... 29 5.8
AB076354-1|BAD01541.1| 370|Homo sapiens keratin associated prot... 29 5.8
AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein. 29 5.8
AK097123-1|BAC04956.1| 323|Homo sapiens protein ( Homo sapiens ... 29 7.7
AB075827-1|BAB85533.1| 608|Homo sapiens KIAA1947 protein protein. 29 7.7
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 107 bits (258), Expect = 1e-23
Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 8/101 (7%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGGVVSRD------SGFNRQREKCFKCNRTGHFARDCXEE 315
MSS+ C+KC R+GH+AREC GG R GF R+ C++C +GH A+DC +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQ 60
Query: 316 ADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 432
D CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 EDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 101
Score = 82.2 bits (194), Expect = 8e-16
Identities = 35/102 (34%), Positives = 53/102 (51%)
Frame = +1
Query: 127 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 306
A++ +P CY C + GH AR+C +KC+ C GH +DC
Sbjct: 74 AKDCKEPKREREQCCYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDC 122
Query: 307 XEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CYRC TGH+A C+++ E +CY C ++GH+AR C
Sbjct: 123 TKV--KCYRCGETGHVAINCSKT-SEVNCYRCGESGHLAREC 161
Score = 80.2 bits (189), Expect = 3e-15
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +1
Query: 139 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFKCNRTGHFARDCXE- 312
+K + CY C R GH A++C + R+RE+ C+ C + GH ARDC
Sbjct: 54 AKDCDLQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHA 104
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CY C GHI ++C + CY C +TGH+A NC
Sbjct: 105 DEQKCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 140
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEA 318
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 127 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 165
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 101 bits (242), Expect = 1e-21
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 11/104 (10%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGG-----VVSRDSGF----NRQREKCFKCNRTGHFARDC 306
MSS+ C+KC R+GH+AREC GG + SR GF + + C++C +GH A+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 307 XEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 432
+ D CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
Score = 82.2 bits (194), Expect = 8e-16
Identities = 35/102 (34%), Positives = 53/102 (51%)
Frame = +1
Query: 127 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 306
A++ +P CY C + GH AR+C +KC+ C GH +DC
Sbjct: 77 AKDCKEPKREREQCCYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDC 125
Query: 307 XEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CYRC TGH+A C+++ E +CY C ++GH+AR C
Sbjct: 126 TKV--KCYRCGETGHVAINCSKT-SEVNCYRCGESGHLAREC 164
Score = 80.2 bits (189), Expect = 3e-15
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +1
Query: 139 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFKCNRTGHFARDCXE- 312
+K + CY C R GH A++C + R+RE+ C+ C + GH ARDC
Sbjct: 57 AKDCDLQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHA 107
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CY C GHI ++C + CY C +TGH+A NC
Sbjct: 108 DEQKCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 143
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEA 318
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 130 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 168
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 101 bits (242), Expect = 1e-21
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 11/104 (10%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGG-----VVSRDSGF----NRQREKCFKCNRTGHFARDC 306
MSS+ C+KC R+GH+AREC GG + SR GF + + C++C +GH A+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 307 XEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 432
+ D CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
Score = 82.2 bits (194), Expect = 8e-16
Identities = 35/102 (34%), Positives = 53/102 (51%)
Frame = +1
Query: 127 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 306
A++ +P CY C + GH AR+C +KC+ C GH +DC
Sbjct: 77 AKDCKEPKREREQCCYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDC 125
Query: 307 XEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CYRC TGH+A C+++ E +CY C ++GH+AR C
Sbjct: 126 TKV--KCYRCGETGHVAINCSKT-SEVNCYRCGESGHLAREC 164
Score = 80.2 bits (189), Expect = 3e-15
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +1
Query: 139 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFKCNRTGHFARDCXE- 312
+K + CY C R GH A++C + R+RE+ C+ C + GH ARDC
Sbjct: 57 AKDCDLQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHA 107
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CY C GHI ++C + CY C +TGH+A NC
Sbjct: 108 DEQKCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 143
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEA 318
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 130 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 168
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 98.3 bits (234), Expect = 1e-20
Identities = 46/105 (43%), Positives = 64/105 (60%), Gaps = 12/105 (11%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQG-----GVVSRDSGF----NRQREKCFKCNRTGHFARDC 306
MSS+ C+KC R+GH+AREC G G+ SR GF + + C++C +GH A+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 307 -XEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 432
+E + CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 DLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 105
Score = 82.2 bits (194), Expect = 8e-16
Identities = 35/102 (34%), Positives = 53/102 (51%)
Frame = +1
Query: 127 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 306
A++ +P CY C + GH AR+C +KC+ C GH +DC
Sbjct: 78 AKDCKEPKREREQCCYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDC 126
Query: 307 XEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CYRC TGH+A C+++ E +CY C ++GH+AR C
Sbjct: 127 TKV--KCYRCGETGHVAINCSKT-SEVNCYRCGESGHLAREC 165
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEA 318
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 131 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 169
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 96.3 bits (229), Expect = 4e-20
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 18/111 (16%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGGVVSRD------SGFNRQR----------EKCFKCNRT 285
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 286 GHFARDCXEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 432
GH A+DC + D CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 82.2 bits (194), Expect = 8e-16
Identities = 35/102 (34%), Positives = 53/102 (51%)
Frame = +1
Query: 127 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 306
A++ +P CY C + GH AR+C +KC+ C GH +DC
Sbjct: 84 AKDCKEPKREREQCCYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDC 132
Query: 307 XEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CYRC TGH+A C+++ E +CY C ++GH+AR C
Sbjct: 133 TKV--KCYRCGETGHVAINCSKT-SEVNCYRCGESGHLAREC 171
Score = 80.2 bits (189), Expect = 3e-15
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +1
Query: 139 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFKCNRTGHFARDCXE- 312
+K + CY C R GH A++C + R+RE+ C+ C + GH ARDC
Sbjct: 64 AKDCDLQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHA 114
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CY C GHI ++C + CY C +TGH+A NC
Sbjct: 115 DEQKCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 150
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEA 318
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 137 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 175
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 96.3 bits (229), Expect = 4e-20
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 18/111 (16%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGGVVSRD------SGFNRQR----------EKCFKCNRT 285
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 286 GHFARDCXEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 432
GH A+DC + D CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 82.2 bits (194), Expect = 8e-16
Identities = 35/102 (34%), Positives = 53/102 (51%)
Frame = +1
Query: 127 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 306
A++ +P CY C + GH AR+C +KC+ C GH +DC
Sbjct: 84 AKDCKEPKREREQCCYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDC 132
Query: 307 XEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CYRC TGH+A C+++ E +CY C ++GH+AR C
Sbjct: 133 TKV--KCYRCGETGHVAINCSKT-SEVNCYRCGESGHLAREC 171
Score = 80.2 bits (189), Expect = 3e-15
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +1
Query: 139 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFKCNRTGHFARDCXE- 312
+K + CY C R GH A++C + R+RE+ C+ C + GH ARDC
Sbjct: 64 AKDCDLQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHA 114
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CY C GHI ++C + CY C +TGH+A NC
Sbjct: 115 DEQKCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 150
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEA 318
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 137 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 175
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 96.3 bits (229), Expect = 4e-20
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 18/111 (16%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGGVVSRD------SGFNRQR----------EKCFKCNRT 285
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 286 GHFARDCXEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 432
GH A+DC + D CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 82.2 bits (194), Expect = 8e-16
Identities = 35/102 (34%), Positives = 53/102 (51%)
Frame = +1
Query: 127 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 306
A++ +P CY C + GH AR+C +KC+ C GH +DC
Sbjct: 84 AKDCKEPKREREQCCYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDC 132
Query: 307 XEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CYRC TGH+A C+++ E +CY C ++GH+AR C
Sbjct: 133 TKV--KCYRCGETGHVAINCSKT-SEVNCYRCGESGHLAREC 171
Score = 80.2 bits (189), Expect = 3e-15
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +1
Query: 139 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFKCNRTGHFARDCXE- 312
+K + CY C R GH A++C + R+RE+ C+ C + GH ARDC
Sbjct: 64 AKDCDLQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHA 114
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CY C GHI ++C + CY C +TGH+A NC
Sbjct: 115 DEQKCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 150
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEA 318
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 137 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 175
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 96.3 bits (229), Expect = 4e-20
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 18/111 (16%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGGVVSRD------SGFNRQR----------EKCFKCNRT 285
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 286 GHFARDCXEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 432
GH A+DC + D CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 82.2 bits (194), Expect = 8e-16
Identities = 35/102 (34%), Positives = 53/102 (51%)
Frame = +1
Query: 127 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 306
A++ +P CY C + GH AR+C +KC+ C GH +DC
Sbjct: 84 AKDCKEPKREREQCCYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDC 132
Query: 307 XEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CYRC TGH+A C+++ E +CY C ++GH+AR C
Sbjct: 133 TKV--KCYRCGETGHVAINCSKT-SEVNCYRCGESGHLAREC 171
Score = 80.2 bits (189), Expect = 3e-15
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +1
Query: 139 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFKCNRTGHFARDCXE- 312
+K + CY C R GH A++C + R+RE+ C+ C + GH ARDC
Sbjct: 64 AKDCDLQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHA 114
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CY C GHI ++C + CY C +TGH+A NC
Sbjct: 115 DEQKCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 150
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEA 318
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 137 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 175
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 93.1 bits (221), Expect = 4e-19
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGGVVSRD------SGFNRQR----------EKCFKCNRT 285
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 286 GHFARDC-XEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 432
GH A+DC +E + CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 GHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 112
Score = 82.2 bits (194), Expect = 8e-16
Identities = 35/102 (34%), Positives = 53/102 (51%)
Frame = +1
Query: 127 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 306
A++ +P CY C + GH AR+C +KC+ C GH +DC
Sbjct: 85 AKDCKEPKREREQCCYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDC 133
Query: 307 XEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CYRC TGH+A C+++ E +CY C ++GH+AR C
Sbjct: 134 TKV--KCYRCGETGHVAINCSKT-SEVNCYRCGESGHLAREC 172
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEA 318
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 138 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 176
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 93.1 bits (221), Expect = 4e-19
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGGVVSRD------SGFNRQR----------EKCFKCNRT 285
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 286 GHFARDC-XEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 432
GH A+DC +E + CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 GHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 112
Score = 82.2 bits (194), Expect = 8e-16
Identities = 35/102 (34%), Positives = 53/102 (51%)
Frame = +1
Query: 127 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 306
A++ +P CY C + GH AR+C +KC+ C GH +DC
Sbjct: 85 AKDCKEPKREREQCCYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDC 133
Query: 307 XEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CYRC TGH+A C+++ E +CY C ++GH+AR C
Sbjct: 134 TKV--KCYRCGETGHVAINCSKT-SEVNCYRCGESGHLAREC 172
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEA 318
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 138 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 176
>BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domain
containing 13 protein.
Length = 166
Score = 85.4 bits (202), Expect = 8e-17
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 139 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEA 318
+K + ++CY C R+GH A++C +D R R+ C+ C R GH ARDC +
Sbjct: 57 AKNCVLLGNICYNCGRSGHIAKDC-------KDPKRER-RQHCYTCGRLGHLARDCDRQK 108
Query: 319 D-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CY C GHI ++CAQ CY C + GH+A NC
Sbjct: 109 EQKCYSCGKLGHIQKDCAQ----VKCYRCGEIGHVAINC 143
Score = 73.3 bits (172), Expect = 4e-13
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKC---------FKCNRTGHFARDC 306
MSS + C +GH+AR C +GG R G + + +C + C +G A++C
Sbjct: 1 MSSKDFFACGHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNC 60
Query: 307 XEEADRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNC 432
+ CY C +GHIA++C E CY C + GH+AR+C
Sbjct: 61 VLLGNICYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDC 104
Score = 70.9 bits (166), Expect = 2e-12
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Frame = +1
Query: 160 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCX----EEADRC 327
S CY C +G A+ C G + C+ C R+GH A+DC E C
Sbjct: 44 SYTCYCCGESGRNAKNCVLLGNI------------CYNCGRSGHIAKDCKDPKRERRQHC 91
Query: 328 YRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 438
Y C GH+AR+C + ++ CY+C K GHI ++C +
Sbjct: 92 YTCGRLGHLARDCDRQKEQ-KCYSCGKLGHIQKDCAQ 127
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 83.8 bits (198), Expect = 3e-16
Identities = 43/99 (43%), Positives = 57/99 (57%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYR 333
MSS+ C+KC R+GH+AREC GG R G R R + F+ F D CYR
Sbjct: 1 MSSNECFKCGRSGHWARECPTGG--GRGRGM-RSRGRGFQ------FVSSSLP--DICYR 49
Query: 334 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRE 450
C +GH+A++C D +CYNC + GHIA++C E RE
Sbjct: 50 CGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKRE 88
Score = 82.2 bits (194), Expect = 8e-16
Identities = 35/102 (34%), Positives = 53/102 (51%)
Frame = +1
Query: 127 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 306
A++ +P CY C + GH AR+C +KC+ C GH +DC
Sbjct: 79 AKDCKEPKREREQCCYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDC 127
Query: 307 XEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
+ +CYRC TGH+A C+++ E +CY C ++GH+AR C
Sbjct: 128 TKV--KCYRCGETGHVAINCSKT-SEVNCYRCGESGHLAREC 166
Score = 79.4 bits (187), Expect = 5e-15
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = +1
Query: 166 VCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXE-EADR---CYR 333
+CY+C +GH A++C E C+ C R GH A+DC E + +R CY
Sbjct: 46 ICYRCGESGHLAKDCD----------LQEDVEACYNCGRGGHIAKDCKEPKREREQCCYN 95
Query: 334 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
C GH+AR+C + DE CY+C + GHI ++C
Sbjct: 96 CGKPGHLARDCDHA-DEQKCYSCGEFGHIQKDC 127
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEA 318
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 132 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 170
>AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid
binding protein protein.
Length = 54
Score = 58.4 bits (135), Expect = 1e-08
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 286 GHFARDCXEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
GH +DC + +CYRC TGH+A C+++ E +CY C ++GH+AR C
Sbjct: 3 GHIQKDCTKV--KCYRCGETGHVAINCSKT-SEVNCYRCGESGHLAREC 48
Score = 51.2 bits (117), Expect = 2e-06
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +1
Query: 262 KCFKCNRTGHFARDCXEEAD-RCYRCNGTGHIAREC 366
KC++C TGH A +C + ++ CYRC +GH+AREC
Sbjct: 13 KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 48
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEA 318
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 14 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 52
>BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein.
Length = 271
Score = 52.4 bits (120), Expect = 7e-07
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Frame = +1
Query: 157 SSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEAD----- 321
++ VC+ C + GH +C + ++D G C++C T H C + D
Sbjct: 126 NAMVCFHCRKPGHGIADCP-AALENQDMGTGI----CYRCGSTEHEITKCKAKVDPALGE 180
Query: 322 ----RCYRCNGTGHIARECAQSP-----DEPSCYNCNKTGHIARNCPE 438
+C+ C GH++R C +P D C C H+ ++CPE
Sbjct: 181 FPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
Score = 40.3 bits (90), Expect = 0.003
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXE------- 312
M + +CY+C T H +C V G KCF C GH +R C +
Sbjct: 152 MGTGICYRCGSTEHEITKCK--AKVDPALG-EFPFAKCFVCGEMGHLSRSCPDNPKGLYA 208
Query: 313 EADRCYRCNGTGHIARECAQS 375
+ C C H+ ++C +S
Sbjct: 209 DGGGCKLCGSVEHLKKDCPES 229
>BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein.
Length = 274
Score = 52.4 bits (120), Expect = 7e-07
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Frame = +1
Query: 157 SSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEAD----- 321
++ VC+ C + GH +C + ++D G C++C T H C + D
Sbjct: 126 NAMVCFHCRKPGHGIADCP-AALENQDMGTGI----CYRCGSTEHEITKCKAKVDPALGE 180
Query: 322 ----RCYRCNGTGHIARECAQSP-----DEPSCYNCNKTGHIARNCPE 438
+C+ C GH++R C +P D C C H+ ++CPE
Sbjct: 181 FPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
Score = 40.3 bits (90), Expect = 0.003
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXE------- 312
M + +CY+C T H +C V G KCF C GH +R C +
Sbjct: 152 MGTGICYRCGSTEHEITKCK--AKVDPALG-EFPFAKCFVCGEMGHLSRSCPDNPKGLYA 208
Query: 313 EADRCYRCNGTGHIARECAQS 375
+ C C H+ ++C +S
Sbjct: 209 DGGGCKLCGSVEHLKKDCPES 229
>BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein.
Length = 239
Score = 51.2 bits (117), Expect = 2e-06
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +1
Query: 238 SGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 417
S + Q + CFKC H + C + DRC+RC GH++ C + C C K GH
Sbjct: 162 SWYKGQPKTCFKCGSRTHMSGSCTQ--DRCFRCGEEGHLSPYCRKG---IVCNLCGKRGH 216
Query: 418 IARNCPEGGRES 453
CP+ S
Sbjct: 217 AFAQCPKAVHNS 228
Score = 34.7 bits (76), Expect = 0.15
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTG 348
C+KC H + CTQ ++CF+C GH + C + C C G
Sbjct: 171 CFKCGSRTHMSGSCTQ--------------DRCFRCGEEGHLSPYC-RKGIVCNLCGKRG 215
Query: 349 HIARECAQS 375
H +C ++
Sbjct: 216 HAFAQCPKA 224
>BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 403
Score = 51.2 bits (117), Expect = 2e-06
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +1
Query: 238 SGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 417
S + Q + CFKC H + C + DRC+RC GH++ C + C C K GH
Sbjct: 326 SWYKGQPKTCFKCGSRTHMSGSCTQ--DRCFRCGEEGHLSPYCRKG---IVCNLCGKRGH 380
Query: 418 IARNCPEGGRES 453
CP+ S
Sbjct: 381 AFAQCPKAVHNS 392
Score = 34.7 bits (76), Expect = 0.15
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTG 348
C+KC H + CTQ ++CF+C GH + C + C C G
Sbjct: 335 CFKCGSRTHMSGSCTQ--------------DRCFRCGEEGHLSPYC-RKGIVCNLCGKRG 379
Query: 349 HIARECAQS 375
H +C ++
Sbjct: 380 HAFAQCPKA 388
>AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 404
Score = 51.2 bits (117), Expect = 2e-06
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +1
Query: 238 SGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 417
S + Q + CFKC H + C + DRC+RC GH++ C + C C K GH
Sbjct: 327 SWYKGQPKTCFKCGSRTHMSGSCTQ--DRCFRCGEEGHLSPYCRKG---IVCNLCGKRGH 381
Query: 418 IARNCPEGGRES 453
CP+ S
Sbjct: 382 AFAQCPKAVHNS 393
Score = 34.7 bits (76), Expect = 0.15
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTG 348
C+KC H + CTQ ++CF+C GH + C + C C G
Sbjct: 336 CFKCGSRTHMSGSCTQ--------------DRCFRCGEEGHLSPYC-RKGIVCNLCGKRG 380
Query: 349 HIARECAQS 375
H +C ++
Sbjct: 381 HAFAQCPKA 389
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 49.6 bits (113), Expect = 5e-06
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+ DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 125 KGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 165
Score = 29.9 bits (64), Expect = 4.4
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCX--EEADRCYRCNGTGHIAREC 366
++C+ C H A++C + +C+ C H+ C
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 164
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 49.6 bits (113), Expect = 5e-06
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+ DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 125 KGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 165
Score = 29.9 bits (64), Expect = 4.4
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCX--EEADRCYRCNGTGHIAREC 366
++C+ C H A++C + +C+ C H+ C
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 164
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 49.6 bits (113), Expect = 5e-06
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+ DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 102 KGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 142
Score = 29.9 bits (64), Expect = 4.4
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCX--EEADRCYRCNGTGHIAREC 366
++C+ C H A++C + +C+ C H+ C
Sbjct: 104 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 141
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 49.6 bits (113), Expect = 5e-06
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+ DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 102 KGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 142
Score = 29.9 bits (64), Expect = 4.4
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCX--EEADRCYRCNGTGHIAREC 366
++C+ C H A++C + +C+ C H+ C
Sbjct: 104 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 141
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 49.6 bits (113), Expect = 5e-06
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+ DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 102 KGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 142
Score = 29.9 bits (64), Expect = 4.4
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCX--EEADRCYRCNGTGHIAREC 366
++C+ C H A++C + +C+ C H+ C
Sbjct: 104 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 141
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 49.6 bits (113), Expect = 5e-06
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+ DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 102 KGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 142
Score = 29.9 bits (64), Expect = 4.4
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCX--EEADRCYRCNGTGHIAREC 366
++C+ C H A++C + +C+ C H+ C
Sbjct: 104 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 141
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 49.6 bits (113), Expect = 5e-06
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+ DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 102 KGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 142
Score = 29.9 bits (64), Expect = 4.4
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCX--EEADRCYRCNGTGHIAREC 366
++C+ C H A++C + +C+ C H+ C
Sbjct: 104 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 141
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 49.6 bits (113), Expect = 5e-06
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+ DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 125 KGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 165
Score = 29.9 bits (64), Expect = 4.4
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCX--EEADRCYRCNGTGHIAREC 366
++C+ C H A++C + +C+ C H+ C
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 164
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 49.6 bits (113), Expect = 5e-06
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+ DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 125 KGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 165
Score = 29.9 bits (64), Expect = 4.4
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCX--EEADRCYRCNGTGHIAREC 366
++C+ C H A++C + +C+ C H+ C
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 164
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 47.6 bits (108), Expect = 2e-05
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+ DRCY C G H A+EC P C+ C H+ +CP
Sbjct: 135 KGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASCP 175
Score = 30.3 bits (65), Expect = 3.3
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCX--EEADRCYRCNGTGHIAREC 366
++C+ C H A++C + +C+ C H+ C
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 47.6 bits (108), Expect = 2e-05
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+ DRCY C G H A+EC P C+ C H+ +CP
Sbjct: 135 KGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASCP 175
Score = 30.3 bits (65), Expect = 3.3
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCX--EEADRCYRCNGTGHIAREC 366
++C+ C H A++C + +C+ C H+ C
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 47.6 bits (108), Expect = 2e-05
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+ DRCY C G H A+EC P C+ C H+ +CP
Sbjct: 135 KGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASCP 175
Score = 30.3 bits (65), Expect = 3.3
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCX--EEADRCYRCNGTGHIAREC 366
++C+ C H A++C + +C+ C H+ C
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 47.6 bits (108), Expect = 2e-05
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+ DRCY C G H A+EC P C+ C H+ +CP
Sbjct: 135 KGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASCP 175
Score = 30.3 bits (65), Expect = 3.3
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCX--EEADRCYRCNGTGHIAREC 366
++C+ C H A++C + +C+ C H+ C
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for
IMAGE:4046616) protein.
Length = 405
Score = 43.2 bits (97), Expect = 4e-04
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = +1
Query: 172 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTGH 351
Y N+ R C + G +S++ R+ +CF C+R GH C A C C
Sbjct: 235 YSANKN-IICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC--PAPLCEYCPVPKM 291
Query: 352 IARECA-QSPDEPSCYNCNKTGHIARNCPEGGRE 450
+ R C + + C C+ GH C E R+
Sbjct: 292 LDRSCLFRHSWDKQCDRCHMLGHYTDACTEIWRQ 325
Score = 41.9 bits (94), Expect = 0.001
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Frame = +1
Query: 145 PIAMSSSVCYKCNRTGHFARECTQG--------GVVSRDSGFNRQREK-CFKCNRTGHFA 297
P+ C+ C+R GH C ++ R F +K C +C+ GH+
Sbjct: 257 PLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDRSCLFRHSWDKQCDRCHMLGHYT 316
Query: 298 RDCXEEADRCYRCNGTGHIARECAQSPDEPS----CYNCNKTGHIARNCPE 438
C E + + G + ++P PS CY+C + GH CPE
Sbjct: 317 DACTEIWRQYHLTTKPGPPKKP--KTPSRPSALAYCYHCAQKGHYGHECPE 365
>BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein.
Length = 542
Score = 41.1 bits (92), Expect = 0.002
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +1
Query: 172 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTGH 351
Y N+ R C + G +S++ R+ +CF C+R GH C A C C
Sbjct: 234 YSANKN-IICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC--PAPLCEYCPVPKM 290
Query: 352 IARECA-QSPDEPSCYNCNKTGHIARNCPEGGRE 450
+ C + + C C+ GH C E R+
Sbjct: 291 LDHSCLFRHSWDKQCDRCHMLGHYTDACTEIWRQ 324
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Frame = +1
Query: 145 PIAMSSSVCYKCNRTGHFARECTQG--------GVVSRDSGFNRQREK-CFKCNRTGHFA 297
P+ C+ C+R GH C ++ F +K C +C+ GH+
Sbjct: 256 PLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHSCLFRHSWDKQCDRCHMLGHYT 315
Query: 298 RDCXEEADRCYRCNGTGHIARECAQSPDEPS----CYNCNKTGHIARNCPE 438
C E + + G + ++P PS CY+C + GH CPE
Sbjct: 316 DACTEIWRQYHLTTKPGPPKKP--KTPSRPSALAYCYHCAQKGHYGHECPE 364
>AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 41.1 bits (92), Expect = 0.002
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +1
Query: 172 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTGH 351
Y N+ R C + G +S++ R+ +CF C+R GH C A C C
Sbjct: 235 YSANKN-IICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC--PAPLCEYCPVPKM 291
Query: 352 IARECA-QSPDEPSCYNCNKTGHIARNCPEGGRE 450
+ C + + C C+ GH C E R+
Sbjct: 292 LDHSCLFRHSWDKQCDRCHMLGHYTDACTEIWRQ 325
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Frame = +1
Query: 145 PIAMSSSVCYKCNRTGHFARECTQG--------GVVSRDSGFNRQREK-CFKCNRTGHFA 297
P+ C+ C+R GH C ++ F +K C +C+ GH+
Sbjct: 257 PLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHSCLFRHSWDKQCDRCHMLGHYT 316
Query: 298 RDCXEEADRCYRCNGTGHIARECAQSPDEPS----CYNCNKTGHIARNCPE 438
C E + + G + ++P PS CY+C + GH CPE
Sbjct: 317 DACTEIWRQYHLTTKPGPPKKP--KTPSRPSALAYCYHCAQKGHYGHECPE 365
>AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 41.1 bits (92), Expect = 0.002
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +1
Query: 172 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTGH 351
Y N+ R C + G +S++ R+ +CF C+R GH C A C C
Sbjct: 235 YSANKN-IICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC--PAPLCEYCPVPKM 291
Query: 352 IARECA-QSPDEPSCYNCNKTGHIARNCPEGGRE 450
+ C + + C C+ GH C E R+
Sbjct: 292 LDHSCLFRHSWDKQCDRCHMLGHYTDACTEIWRQ 325
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Frame = +1
Query: 145 PIAMSSSVCYKCNRTGHFARECTQG--------GVVSRDSGFNRQREK-CFKCNRTGHFA 297
P+ C+ C+R GH C ++ F +K C +C+ GH+
Sbjct: 257 PLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHSCLFRHSWDKQCDRCHMLGHYT 316
Query: 298 RDCXEEADRCYRCNGTGHIARECAQSPDEPS----CYNCNKTGHIARNCPE 438
C E + + G + ++P PS CY+C + GH CPE
Sbjct: 317 DACTEIWRQYHLTTKPGPPKKP--KTPSRPSALAYCYHCAQKGHYGHECPE 365
>AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens
cDNA FLJ90127 fis, clone HEMBB1000106, weakly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 391
Score = 41.1 bits (92), Expect = 0.002
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +1
Query: 172 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTGH 351
Y N+ R C + G +S++ R+ +CF C+R GH C A C C
Sbjct: 83 YSANKN-IICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC--PAPLCEYCPVPKM 139
Query: 352 IARECA-QSPDEPSCYNCNKTGHIARNCPEGGRE 450
+ C + + C C+ GH C E R+
Sbjct: 140 LDHSCLFRHSWDKQCDRCHMLGHYTDACTEIWRQ 173
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Frame = +1
Query: 145 PIAMSSSVCYKCNRTGHFARECTQG--------GVVSRDSGFNRQREK-CFKCNRTGHFA 297
P+ C+ C+R GH C ++ F +K C +C+ GH+
Sbjct: 105 PLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHSCLFRHSWDKQCDRCHMLGHYT 164
Query: 298 RDCXEEADRCYRCNGTGHIARECAQSPDEPS----CYNCNKTGHIARNCPE 438
C E + + G + ++P PS CY+C + GH CPE
Sbjct: 165 DACTEIWRQYHLTTKPGPPKKP--KTPSRPSALAYCYHCAQKGHYGHECPE 213
>AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22611 fis, clone HSI04961. ).
Length = 454
Score = 41.1 bits (92), Expect = 0.002
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +1
Query: 172 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTGH 351
Y N+ R C + G +S++ R+ +CF C+R GH C A C C
Sbjct: 235 YSANKN-IICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC--PAPLCEYCPVPKM 291
Query: 352 IARECA-QSPDEPSCYNCNKTGHIARNCPEGGRE 450
+ C + + C C+ GH C E R+
Sbjct: 292 LDHSCLFRHSWDKQCDRCHMLGHYTDACTEIWRQ 325
Score = 39.9 bits (89), Expect = 0.004
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Frame = +1
Query: 145 PIAMSSSVCYKCNRTGHFARECTQG--------GVVSRDSGFNRQREK-CFKCNRTGHFA 297
P+ C+ C+R GH C ++ F +K C +C+ GH+
Sbjct: 257 PLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHSCLFRHSWDKQCDRCHMLGHYT 316
Query: 298 RDCXEEADRCYRCNGTGHIARECAQSPDEPS----CYNCNKTGHIARNCPE 438
C E + + G + ++P PS CY+C + GH CPE
Sbjct: 317 DACTEIWRQYHLTTKPGPPKKP--KTPSRPSALAYCYHCAQKGHYGHECPE 365
>AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein.
Length = 622
Score = 38.7 bits (86), Expect = 0.009
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK--CFKCNRTGHFARDC 306
M +C++C R GH REC G R C +C R H+ +C
Sbjct: 503 MRGRICFRCGREGHLMRECRAKFPARDRQGIENSRRPGLCPRCRRGNHWVSEC 555
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 226 VSRDSGFNRQREKCFKCNRTGHFARDC 306
V+R N + CF+C R GH R+C
Sbjct: 495 VTRQFRQNMRGRICFRCGREGHLMREC 521
>D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein.
Length = 1516
Score = 35.1 bits (77), Expect = 0.12
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +1
Query: 148 IAMSSSVCYKCNRTGHFARECTQG-GVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR 324
+A + C C + GH+ ++C + ++ R + + EK + N +RD + D
Sbjct: 1160 LAPNDRCCRVCGKIGHYMKDCPKRKSLLFRLKKKDSEEEK--EGNEEEKDSRDVLDPRDL 1217
Query: 325 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 438
H R+ + P + C+ C GH+ R CPE
Sbjct: 1218 --------HDTRDF-RDPRDLRCFICGDAGHVRRECPE 1246
>BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domain
containing 11 protein.
Length = 1645
Score = 35.1 bits (77), Expect = 0.12
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +1
Query: 148 IAMSSSVCYKCNRTGHFARECTQ--GGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEAD 321
+A + C C + GH+ ++C + ++ R + + EK + N +RD + D
Sbjct: 1288 LAPNDRCCRVCGKIGHYMKDCPKRKSSLLFRLKKKDSEEEK--EGNEEEKDSRDVLDPRD 1345
Query: 322 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 438
H R+ + P + C+ C GH+ R CPE
Sbjct: 1346 L--------HDTRDF-RDPRDLRCFICGDAGHVRRECPE 1375
>AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domain
containing 11 protein.
Length = 1644
Score = 35.1 bits (77), Expect = 0.12
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +1
Query: 148 IAMSSSVCYKCNRTGHFARECTQG-GVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR 324
+A + C C + GH+ ++C + ++ R + + EK + N +RD + D
Sbjct: 1288 LAPNDRCCRVCGKIGHYMKDCPKRKSLLFRLKKKDSEEEK--EGNEEEKDSRDVLDPRDL 1345
Query: 325 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 438
H R+ + P + C+ C GH+ R CPE
Sbjct: 1346 --------HDTRDF-RDPRDLRCFICGDAGHVRRECPE 1374
>U79569-1|AAD00321.1| 269|Homo sapiens no arches protein.
Length = 269
Score = 33.9 bits (74), Expect = 0.27
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 145 PIAMSSSVCYKCNRTGHFARECTQG 219
P + CYKC GH+A CT+G
Sbjct: 237 PRPLEQVTCYKCGEKGHYANRCTKG 261
>EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 269
Score = 33.9 bits (74), Expect = 0.27
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 145 PIAMSSSVCYKCNRTGHFARECTQG 219
P + CYKC GH+A CT+G
Sbjct: 237 PRPLEQVTCYKCGEKGHYANRCTKG 261
>CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein.
Length = 269
Score = 33.9 bits (74), Expect = 0.27
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 145 PIAMSSSVCYKCNRTGHFARECTQG 219
P + CYKC GH+A CT+G
Sbjct: 237 PRPLEQVTCYKCGEKGHYANRCTKG 261
>BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein.
Length = 243
Score = 33.9 bits (74), Expect = 0.27
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 145 PIAMSSSVCYKCNRTGHFARECTQG 219
P + CYKC GH+A CT+G
Sbjct: 211 PRPLEQVTCYKCGEKGHYANRCTKG 235
>BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 244
Score = 33.9 bits (74), Expect = 0.27
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 145 PIAMSSSVCYKCNRTGHFARECTQG 219
P + CYKC GH+A CT+G
Sbjct: 212 PRPLEQVTCYKCGEKGHYANRCTKG 236
>M80482-1|AAA59998.1| 969|Homo sapiens subtilisin-like protease
protein.
Length = 969
Score = 32.7 bits (71), Expect = 0.62
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Frame = +1
Query: 157 SSSVCYKCNRTGHFARECTQGGVVSRDSGF--NRQREKCFKCNRTGHFARDCXEEADRCY 330
+++ C C R G + + V +GF + ++ C KC+ + + C +E ++C
Sbjct: 760 AATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPEKCT 815
Query: 331 RCNGTGHIARECAQSPDEPSCY------NCNKTGHIARNCPEGGRE 450
C +AR EP Y C + H C GRE
Sbjct: 816 VCKEGFSLARGSCIPDCEPGTYFDSELIRCGECHHTCGTCVGPGRE 861
>D87995-1|BAA21793.1| 956|Homo sapiens PACE4A-II protein.
Length = 956
Score = 32.7 bits (71), Expect = 0.62
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Frame = +1
Query: 157 SSSVCYKCNRTGHFARECTQGGVVSRDSGF--NRQREKCFKCNRTGHFARDCXEEADRCY 330
+++ C C R G + + V +GF + ++ C KC+ + + C +E ++C
Sbjct: 747 AATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPEKCT 802
Query: 331 RCNGTGHIARECAQSPDEPSCY------NCNKTGHIARNCPEGGRE 450
C +AR EP Y C + H C GRE
Sbjct: 803 VCKEGFSLARGSCIPDCEPGTYFDSELIRCGECHHTCGTCVGPGRE 848
>D87994-1|BAA21792.1| 962|Homo sapiens PACE4E-II protein.
Length = 962
Score = 32.7 bits (71), Expect = 0.62
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Frame = +1
Query: 157 SSSVCYKCNRTGHFARECTQGGVVSRDSGF--NRQREKCFKCNRTGHFARDCXEEADRCY 330
+++ C C R G + + V +GF + ++ C KC+ + + C +E ++C
Sbjct: 747 AATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPEKCT 802
Query: 331 RCNGTGHIARECAQSPDEPSCY------NCNKTGHIARNCPEGGRE 450
C +AR EP Y C + H C GRE
Sbjct: 803 VCKEGFSLARGSCIPDCEPGTYFDSELIRCGECHHTCGTCVGPGRE 848
>D87993-1|BAA21791.1| 975|Homo sapiens PACE4E-I protein.
Length = 975
Score = 32.7 bits (71), Expect = 0.62
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Frame = +1
Query: 157 SSSVCYKCNRTGHFARECTQGGVVSRDSGF--NRQREKCFKCNRTGHFARDCXEEADRCY 330
+++ C C R G + + V +GF + ++ C KC+ + + C +E ++C
Sbjct: 760 AATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPEKCT 815
Query: 331 RCNGTGHIARECAQSPDEPSCY------NCNKTGHIARNCPEGGRE 450
C +AR EP Y C + H C GRE
Sbjct: 816 VCKEGFSLARGSCIPDCEPGTYFDSELIRCGECHHTCGTCVGPGRE 861
>AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein
protein.
Length = 899
Score = 32.7 bits (71), Expect = 0.62
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 115 SVLSAQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQR 258
+V++ S P + CY C +GH+A++C Q + + G R R
Sbjct: 836 NVVANTSGSGPKKNGNVSCYNCGVSGHYAQDCKQSSMEANQQGTYRLR 883
Score = 31.5 bits (68), Expect = 1.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPEGGRES 453
SCYNC +GH A++C + E+
Sbjct: 853 SCYNCGVSGHYAQDCKQSSMEA 874
>AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens
cDNA FLJ20281 fis, clone HEP03769. ).
Length = 298
Score = 32.7 bits (71), Expect = 0.62
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 115 SVLSAQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQR 258
+V++ S P + CY C +GH+A++C Q + + G R R
Sbjct: 235 NVVANTSGSGPKKNGNVSCYNCGVSGHYAQDCKQSSMEANQQGTYRLR 282
Score = 31.5 bits (68), Expect = 1.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPEGGRES 453
SCYNC +GH A++C + E+
Sbjct: 252 SCYNCGVSGHYAQDCKQSSMEA 273
>AB208955-1|BAD92192.1| 800|Homo sapiens paired basic amino acid
cleaving system 4 isoform a preproprotein variant
protein.
Length = 800
Score = 32.7 bits (71), Expect = 0.62
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Frame = +1
Query: 157 SSSVCYKCNRTGHFARECTQGGVVSRDSGF--NRQREKCFKCNRTGHFARDCXEEADRCY 330
+++ C C R G + + V +GF + ++ C KC+ + + C +E ++C
Sbjct: 591 AATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPEKCT 646
Query: 331 RCNGTGHIARECAQSPDEPSCY------NCNKTGHIARNCPEGGRE 450
C +AR EP Y C + H C GRE
Sbjct: 647 VCKEGFSLARGSCIPDCEPGTYFDSELIRCGECHHTCGTCVGPGRE 692
>AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein.
Length = 855
Score = 32.7 bits (71), Expect = 0.62
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 115 SVLSAQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQR 258
+V++ S P + CY C +GH+A++C Q + + G R R
Sbjct: 792 NVVANTSGSGPKKNGNVSCYNCGVSGHYAQDCKQSSMEANQQGTYRLR 839
Score = 31.5 bits (68), Expect = 1.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPEGGRES 453
SCYNC +GH A++C + E+
Sbjct: 809 SCYNCGVSGHYAQDCKQSSMEA 830
>AB001914-4|BAA21627.1| 975|Homo sapiens PACE4E-I protein.
Length = 975
Score = 32.7 bits (71), Expect = 0.62
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Frame = +1
Query: 157 SSSVCYKCNRTGHFARECTQGGVVSRDSGF--NRQREKCFKCNRTGHFARDCXEEADRCY 330
+++ C C R G + + V +GF + ++ C KC+ + + C +E ++C
Sbjct: 760 AATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPEKCT 815
Query: 331 RCNGTGHIARECAQSPDEPSCY------NCNKTGHIARNCPEGGRE 450
C +AR EP Y C + H C GRE
Sbjct: 816 VCKEGFSLARGSCIPDCEPGTYFDSELIRCGECHHTCGTCVGPGRE 861
>AB001914-3|BAA21626.1| 962|Homo sapiens PACE4E-II protein.
Length = 962
Score = 32.7 bits (71), Expect = 0.62
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Frame = +1
Query: 157 SSSVCYKCNRTGHFARECTQGGVVSRDSGF--NRQREKCFKCNRTGHFARDCXEEADRCY 330
+++ C C R G + + V +GF + ++ C KC+ + + C +E ++C
Sbjct: 747 AATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPEKCT 802
Query: 331 RCNGTGHIARECAQSPDEPSCY------NCNKTGHIARNCPEGGRE 450
C +AR EP Y C + H C GRE
Sbjct: 803 VCKEGFSLARGSCIPDCEPGTYFDSELIRCGECHHTCGTCVGPGRE 848
>AB001914-2|BAA21625.1| 956|Homo sapiens PACE4A-II protein.
Length = 956
Score = 32.7 bits (71), Expect = 0.62
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Frame = +1
Query: 157 SSSVCYKCNRTGHFARECTQGGVVSRDSGF--NRQREKCFKCNRTGHFARDCXEEADRCY 330
+++ C C R G + + V +GF + ++ C KC+ + + C +E ++C
Sbjct: 747 AATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPEKCT 802
Query: 331 RCNGTGHIARECAQSPDEPSCY------NCNKTGHIARNCPEGGRE 450
C +AR EP Y C + H C GRE
Sbjct: 803 VCKEGFSLARGSCIPDCEPGTYFDSELIRCGECHHTCGTCVGPGRE 848
>AB001914-1|BAA21624.1| 969|Homo sapiens PACE4A-I protein.
Length = 969
Score = 32.7 bits (71), Expect = 0.62
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Frame = +1
Query: 157 SSSVCYKCNRTGHFARECTQGGVVSRDSGF--NRQREKCFKCNRTGHFARDCXEEADRCY 330
+++ C C R G + + V +GF + ++ C KC+ + + C +E ++C
Sbjct: 760 AATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPEKCT 815
Query: 331 RCNGTGHIARECAQSPDEPSCY------NCNKTGHIARNCPEGGRE 450
C +AR EP Y C + H C GRE
Sbjct: 816 VCKEGFSLARGSCIPDCEPGTYFDSELIRCGECHHTCGTCVGPGRE 861
>M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein.
Length = 434
Score = 32.3 bits (70), Expect = 0.82
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 391 CYNCNKTGHIARNCP 435
CYNC + GH+ +NCP
Sbjct: 314 CYNCGQIGHLKKNCP 328
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Frame = +1
Query: 169 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR 324
CY C + GH + C Q + + + C +C + H+A C + D+
Sbjct: 314 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 369
>DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein.
Length = 668
Score = 32.3 bits (70), Expect = 0.82
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 391 CYNCNKTGHIARNCP 435
CYNC + GH+ +NCP
Sbjct: 545 CYNCGQIGHLKKNCP 559
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +1
Query: 169 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQ-REKCFKCNRTGHFARDCXEEADR 324
CY C + GH + C Q + + R+ + C +C + H+A C + D+
Sbjct: 545 CYNCGQIGHLKKNCPVLNKQNITIQATTTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein.
Length = 919
Score = 32.3 bits (70), Expect = 0.82
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 376 PDEPSCYNCNKTGHIARNCPEGG 444
P +C+ C K GH +NCP G
Sbjct: 156 PPSYTCFRCGKPGHYIKNCPTNG 178
Score = 29.1 bits (62), Expect = 7.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 160 SSVCYKCNRTGHFARECTQGGVVSRDSG 243
S C++C + GH+ + C G + +SG
Sbjct: 158 SYTCFRCGKPGHYIKNCPTNGDKNFESG 185
>AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular
protein PACT protein.
Length = 1625
Score = 32.3 bits (70), Expect = 0.82
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 376 PDEPSCYNCNKTGHIARNCPEGG 444
P +C+ C K GH +NCP G
Sbjct: 23 PPSYTCFRCGKPGHYIKNCPTNG 45
Score = 29.1 bits (62), Expect = 7.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 160 SSVCYKCNRTGHFARECTQGGVVSRDSG 243
S C++C + GH+ + C G + +SG
Sbjct: 25 SYTCFRCGKPGHYIKNCPTNGDKNFESG 52
>AK127846-1|BAC87158.1| 483|Homo sapiens protein ( Homo sapiens
cDNA FLJ45949 fis, clone PLACE7007973. ).
Length = 483
Score = 32.3 bits (70), Expect = 0.82
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 364 CAQSPDEPSCYNCNKTGHIARNCPEGGR 447
C + +CY C K GH NCP G R
Sbjct: 428 CPKDTFPGNCYQCGKPGHWKANCPYGPR 455
Score = 32.3 bits (70), Expect = 0.82
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = +1
Query: 325 CYRCNGTGHIARECAQSP--DEP--SCYNCNKTGHIARNCPE 438
CY+C GH C P ++P +C C K + NCPE
Sbjct: 437 CYQCGKPGHWKANCPYGPRGEKPCTACPLCRKLRYWKENCPE 478
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1117
Score = 32.3 bits (70), Expect = 0.82
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 391 CYNCNKTGHIARNCP 435
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Frame = +1
Query: 169 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR 324
CY C + GH + C Q + + + C +C + H+A C + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 32.3 bits (70), Expect = 0.82
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 391 CYNCNKTGHIARNCP 435
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Frame = +1
Query: 169 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR 324
CY C + GH + C Q + + + C +C + H+A C + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 32.3 bits (70), Expect = 0.82
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 391 CYNCNKTGHIARNCP 435
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Frame = +1
Query: 169 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR 324
CY C + GH + C Q + + + C +C + H+A C + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 32.3 bits (70), Expect = 0.82
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 391 CYNCNKTGHIARNCP 435
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Frame = +1
Query: 169 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR 324
CY C + GH + C Q + + + C +C + H+A C + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1177
Score = 32.3 bits (70), Expect = 0.82
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 391 CYNCNKTGHIARNCP 435
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Frame = +1
Query: 169 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR 324
CY C + GH + C Q + + + C +C + H+A C + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF074086-5|AAD21095.2| 666|Homo sapiens gag protein.
Length = 666
Score = 32.3 bits (70), Expect = 0.82
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 391 CYNCNKTGHIARNCP 435
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Frame = +1
Query: 169 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR 324
CY C + GH + C Q + + + C +C + H+A C + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein.
Length = 666
Score = 32.3 bits (70), Expect = 0.82
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 391 CYNCNKTGHIARNCP 435
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Frame = +1
Query: 169 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR 324
CY C + GH + C Q + + + C +C + H+A C + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding
protein 6 isoform 2 protein.
Length = 1758
Score = 32.3 bits (70), Expect = 0.82
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 376 PDEPSCYNCNKTGHIARNCPEGG 444
P +C+ C K GH +NCP G
Sbjct: 156 PPSYTCFRCGKPGHYIKNCPTNG 178
Score = 29.1 bits (62), Expect = 7.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 160 SSVCYKCNRTGHFARECTQGGVVSRDSG 243
S C++C + GH+ + C G + +SG
Sbjct: 158 SYTCFRCGKPGHYIKNCPTNGDKNFESG 185
>AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding
protein 6 isoform 1 protein.
Length = 1792
Score = 32.3 bits (70), Expect = 0.82
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 376 PDEPSCYNCNKTGHIARNCPEGG 444
P +C+ C K GH +NCP G
Sbjct: 156 PPSYTCFRCGKPGHYIKNCPTNG 178
Score = 29.1 bits (62), Expect = 7.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 160 SSVCYKCNRTGHFARECTQGGVVSRDSG 243
S C++C + GH+ + C G + +SG
Sbjct: 158 SYTCFRCGKPGHYIKNCPTNGDKNFESG 185
>BC105930-1|AAI05931.1| 651|Homo sapiens ZNF816A protein protein.
Length = 651
Score = 31.9 bits (69), Expect = 1.1
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQ-GGVVSRDSGFNRQR-----EKCFKCNRTGH-FARDCXE 312
MSS VC++ TG +C + G S S R EK +KCN G F R+
Sbjct: 297 MSSLVCHRRLHTGEKPYKCNECGKTFSEKSSLRCHRRLHTGEKPYKCNECGKTFGRNSAL 356
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 417
+ + EC ++ + S C+ H
Sbjct: 357 VIHKAIHTGEKPYKCNECGKTFSQKSSLQCHHILH 391
>BC105740-1|AAI05741.1| 652|Homo sapiens ZNF816A protein protein.
Length = 652
Score = 31.9 bits (69), Expect = 1.1
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQ-GGVVSRDSGFNRQR-----EKCFKCNRTGH-FARDCXE 312
MSS VC++ TG +C + G S S R EK +KCN G F R+
Sbjct: 298 MSSLVCHRRLHTGEKPYKCNECGKTFSEKSSLRCHRRLHTGEKPYKCNECGKTFGRNSAL 357
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 417
+ + EC ++ + S C+ H
Sbjct: 358 VIHKAIHTGEKPYKCNECGKTFSQKSSLQCHHILH 392
>BC105739-1|AAI05740.1| 651|Homo sapiens ZNF816A protein protein.
Length = 651
Score = 31.9 bits (69), Expect = 1.1
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQ-GGVVSRDSGFNRQR-----EKCFKCNRTGH-FARDCXE 312
MSS VC++ TG +C + G S S R EK +KCN G F R+
Sbjct: 297 MSSLVCHRRLHTGEKPYKCNECGKTFSEKSSLRCHRRLHTGEKPYKCNECGKTFGRNSAL 356
Query: 313 EADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 417
+ + EC ++ + S C+ H
Sbjct: 357 VIHKAIHTGEKPYKCNECGKTFSQKSSLQCHHILH 391
>AK091495-1|BAC03676.1| 212|Homo sapiens protein ( Homo sapiens
cDNA FLJ34176 fis, clone FCBBF3016178. ).
Length = 212
Score = 31.9 bits (69), Expect = 1.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 232 RDSGFNRQREKCFKCNRTGHFARDCXE 312
R G N + KC+ C + GHF ++C +
Sbjct: 126 RSQGSNPKVGKCYNCEKPGHFKKECRQ 152
Score = 30.3 bits (65), Expect = 3.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQ 216
CY C + GHF +EC Q
Sbjct: 137 CYNCEKPGHFKKECRQ 152
Score = 29.9 bits (64), Expect = 4.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1
Query: 358 RECAQSPDEPSCYNCNKTGHIARNC 432
R +P CYNC K GH + C
Sbjct: 126 RSQGSNPKVGKCYNCEKPGHFKKEC 150
Score = 29.1 bits (62), Expect = 7.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 322 RCYRCNGTGHIARECAQSPDEPSCYN 399
+CY C GH +EC Q + YN
Sbjct: 136 KCYNCEKPGHFKKECRQISVQKGPYN 161
>AK128465-1|BAC87453.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ46608 fis, clone TKIDN2003396, weakly similar
to Homo sapiens paternally expressed 10 (PEG10). ).
Length = 310
Score = 31.5 bits (68), Expect = 1.4
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 250 RQREKCFKCNRTGHFARDCXEEADRC-YRCNGTGH 351
++ + C C+++GHF RDC + R N T H
Sbjct: 275 QETQLCLYCSQSGHFTRDCLAKRSRAPATTNNTAH 309
>X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor
receptor type 1 protein.
Length = 455
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -2
Query: 448 PAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQPLXCNPSQSVLCGC 275
P P +D+ R C S + TA +R C++CR + C + +CGC
Sbjct: 73 PGPGQDTDCR---ECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGC 127
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 30.7 bits (66), Expect = 2.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 379 DEPSCYNCNKTGHIARNCP 435
D+ CY C K GH ++ CP
Sbjct: 158 DQSGCYRCGKEGHWSKECP 176
Score = 29.1 bits (62), Expect = 7.7
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = +1
Query: 163 SVCYKCNRTGHFAREC---TQGGVVSRDSGFNRQ 255
S CY+C + GH+++EC G V +N Q
Sbjct: 160 SGCYRCGKEGHWSKECPIDRSGRVADLTEQYNEQ 193
>M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor
receptor 1 protein.
Length = 455
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -2
Query: 448 PAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQPLXCNPSQSVLCGC 275
P P +D+ R C S + TA +R C++CR + C + +CGC
Sbjct: 73 PGPGQDTDCR---ECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGC 127
>M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -2
Query: 448 PAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQPLXCNPSQSVLCGC 275
P P +D+ R C S + TA +R C++CR + C + +CGC
Sbjct: 73 PGPGQDTDCR---ECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGC 127
>M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein.
Length = 453
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -2
Query: 448 PAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQPLXCNPSQSVLCGC 275
P P +D+ R C S + TA +R C++CR + C + +CGC
Sbjct: 73 PGPGQDTDCR---ECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGC 127
>M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -2
Query: 448 PAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQPLXCNPSQSVLCGC 275
P P +D+ R C S + TA +R C++CR + C + +CGC
Sbjct: 73 PGPGQDTDCR---ECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGC 127
>M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor
necrosis factor receptor mRNA, complete cds. ).
Length = 455
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -2
Query: 448 PAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQPLXCNPSQSVLCGC 275
P P +D+ R C S + TA +R C++CR + C + +CGC
Sbjct: 73 PGPGQDTDCR---ECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGC 127
>BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domain
containing 14 protein.
Length = 949
Score = 30.7 bits (66), Expect = 2.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPE 438
SCYNC TGH A++C +
Sbjct: 907 SCYNCGATGHRAQDCKQ 923
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 30.7 bits (66), Expect = 2.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 379 DEPSCYNCNKTGHIARNCP 435
D+ CY C K GH ++ CP
Sbjct: 158 DQSGCYRCGKEGHWSKECP 176
Score = 29.1 bits (62), Expect = 7.7
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = +1
Query: 163 SVCYKCNRTGHFAREC---TQGGVVSRDSGFNRQ 255
S CY+C + GH+++EC G V +N Q
Sbjct: 160 SGCYRCGKEGHWSKECPIDRSGRVADLTEQYNEQ 193
>BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -2
Query: 448 PAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQPLXCNPSQSVLCGC 275
P P +D+ R C S + TA +R C++CR + C + +CGC
Sbjct: 73 PGPGQDTDCR---ECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGC 127
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 30.7 bits (66), Expect = 2.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 379 DEPSCYNCNKTGHIARNCP 435
D+ CY C K GH ++ CP
Sbjct: 158 DQSGCYRCGKEGHWSKECP 176
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 30.7 bits (66), Expect = 2.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 379 DEPSCYNCNKTGHIARNCP 435
D+ CY C K GH ++ CP
Sbjct: 158 DQSGCYRCGKEGHWSKECP 176
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 30.7 bits (66), Expect = 2.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 379 DEPSCYNCNKTGHIARNCP 435
D+ CY C K GH ++ CP
Sbjct: 158 DQSGCYRCGKEGHWSKECP 176
Score = 29.1 bits (62), Expect = 7.7
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = +1
Query: 163 SVCYKCNRTGHFAREC---TQGGVVSRDSGFNRQ 255
S CY+C + GH+++EC G V +N Q
Sbjct: 160 SGCYRCGKEGHWSKECPIDRSGRVADLTEQYNEQ 193
>AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -2
Query: 448 PAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQPLXCNPSQSVLCGC 275
P P +D+ R C S + TA +R C++CR + C + +CGC
Sbjct: 73 PGPGQDTDCR---ECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGC 127
>AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 30.7 bits (66), Expect = 2.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPE 438
SCYNC TGH A++C +
Sbjct: 790 SCYNCGATGHRAQDCKQ 806
>AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein.
Length = 949
Score = 30.7 bits (66), Expect = 2.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPE 438
SCYNC TGH A++C +
Sbjct: 907 SCYNCGATGHRAQDCKQ 923
>AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein.
Length = 910
Score = 30.7 bits (66), Expect = 2.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPE 438
SCYNC TGH A++C +
Sbjct: 868 SCYNCGATGHRAQDCKQ 884
>Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein.
Length = 638
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 325 CYRCNGTGHIARECA-QSPDEP 387
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 325 CYRCNGTGHIARECA-QSPDEP 387
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 325 CYRCNGTGHIARECA-QSPDEP 387
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1
protein.
Length = 571
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 325 CYRCNGTGHIARECA-QSPDEP 387
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein.
Length = 623
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 325 CYRCNGTGHIARECA-QSPDEP 387
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternatively
spliced product protein.
Length = 548
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 325 CYRCNGTGHIARECA-QSPDEP 387
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>BC119643-1|AAI19644.1| 370|Homo sapiens keratin associated protein
10-7 protein.
Length = 370
Score = 29.5 bits (63), Expect = 5.8
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -2
Query: 418 CGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQPLXCNPSQSVLCGC 275
C P+CC+ + RP S + CR C P C P+ S C
Sbjct: 293 CQPACCTTSC-CRPSSSVSLLCRPVCRPACCVPVPSCCAPTSSCQASC 339
>BC109322-1|AAI09323.1| 320|Homo sapiens nucleotide binding protein
1 (MinD homolog, E. coli) protein.
Length = 320
Score = 29.5 bits (63), Expect = 5.8
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +2
Query: 188 PGISRANARRGAWCRGIPVSIGNVRSASSATAQDTLRGIAXKRLTVATDVTAL 346
PG A A RGA C+G P + S + ATA + I K TV + L
Sbjct: 9 PGADSAQAGRGASCQGCP-NQRLCASGAGATADTAIEEIKEKMKTVKHKILVL 60
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 325 CYRCNGTGHIARECA-QSPDEP 387
C +C G GHIA +C Q P +P
Sbjct: 404 CTKCGGAGHIASDCKFQRPGDP 425
>BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type and
RNA binding motif 1 protein.
Length = 217
Score = 29.5 bits (63), Expect = 5.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 379 DEPSCYNCNKTGHIARNCPE 438
D+ CY C ++GH++ CP+
Sbjct: 103 DKSKCYECGESGHLSYACPK 122
>BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 325 CYRCNGTGHIARECA-QSPDEP 387
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein.
Length = 140
Score = 29.5 bits (63), Expect = 5.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 379 DEPSCYNCNKTGHIARNCPE 438
D+ CY C ++GH++ CP+
Sbjct: 103 DKSKCYECGESGHLSYACPK 122
>BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 325 CYRCNGTGHIARECA-QSPDEP 387
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 325 CYRCNGTGHIARECA-QSPDEP 387
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for
IMAGE:3609027) protein.
Length = 141
Score = 29.5 bits (63), Expect = 5.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 379 DEPSCYNCNKTGHIARNCPE 438
D+ CY C ++GH++ CP+
Sbjct: 103 DKSKCYECGESGHLSYACPK 122
>AK223204-1|BAD96924.1| 320|Homo sapiens nucleotide binding protein
1 (MinD homolog, E. coli) variant protein.
Length = 320
Score = 29.5 bits (63), Expect = 5.8
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +2
Query: 188 PGISRANARRGAWCRGIPVSIGNVRSASSATAQDTLRGIAXKRLTVATDVTAL 346
PG A A RGA C+G P + S + ATA + I K TV + L
Sbjct: 9 PGADSAQAGRGASCQGCP-NQRLCASGAGATADTAIEEIKEKMKTVKHKILVL 60
>AK128650-1|BAC87549.1| 1662|Homo sapiens protein ( Homo sapiens
cDNA FLJ46809 fis, clone TRACH3035451. ).
Length = 1662
Score = 29.5 bits (63), Expect = 5.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 436 RDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQ 317
R VRC C S ++ P V T AL + YIC++G+
Sbjct: 780 RSREVRCMLQCPSVEVSFLPLIVNTVALPDELSYICTHGE 819
>AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein.
Length = 3628
Score = 29.5 bits (63), Expect = 5.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 436 RDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQ 317
R VRC C S ++ P V T AL + YIC++G+
Sbjct: 2617 RSREVRCMLQCPSVEVSFLPLIVNTVALPDELSYICTHGE 2656
>AJ626860-1|CAF25187.1| 3585|Homo sapiens VPS13C-1B protein protein.
Length = 3585
Score = 29.5 bits (63), Expect = 5.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 436 RDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQ 317
R VRC C S ++ P V T AL + YIC++G+
Sbjct: 2574 RSREVRCMLQCPSVEVSFLPLIVNTVALPDELSYICTHGE 2613
>AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein.
Length = 3753
Score = 29.5 bits (63), Expect = 5.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 436 RDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQ 317
R VRC C S ++ P V T AL + YIC++G+
Sbjct: 2617 RSREVRCMLQCPSVEVSFLPLIVNTVALPDELSYICTHGE 2656
>AJ608770-1|CAE75582.1| 3710|Homo sapiens VPS13C-1A protein protein.
Length = 3710
Score = 29.5 bits (63), Expect = 5.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 436 RDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQ 317
R VRC C S ++ P V T AL + YIC++G+
Sbjct: 2574 RSREVRCMLQCPSVEVSFLPLIVNTVALPDELSYICTHGE 2613
>AF307451-1|AAK30049.1| 578|Homo sapiens Cat eye syndrome critical
region candidate gene number 6 protein.
Length = 578
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = -2
Query: 430 SSVRCGPSCCSCNMTARPGSVRTRALCA---QCRY 335
S C P CC C RPG R CA +CR+
Sbjct: 164 SGASCCPCCCCCGCPDRPGRRGRRRGCAPSPRCRW 198
>AB076354-1|BAD01541.1| 370|Homo sapiens keratin associated protein
protein.
Length = 370
Score = 29.5 bits (63), Expect = 5.8
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -2
Query: 418 CGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQPLXCNPSQSVLCGC 275
C P+CC+ + RP S + CR C P C P+ S C
Sbjct: 293 CQPACCTTSC-CRPSSSVSLLCRPVCRPACCVPVPSCCAPTSSCQASC 339
>AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein.
Length = 217
Score = 29.5 bits (63), Expect = 5.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 379 DEPSCYNCNKTGHIARNCPE 438
D+ CY C ++GH++ CP+
Sbjct: 103 DKSKCYECGESGHLSYACPK 122
>AK097123-1|BAC04956.1| 323|Homo sapiens protein ( Homo sapiens
cDNA FLJ39804 fis, clone SPLEN2007926, moderately
similar to ZINC FINGER PROTEIN 132. ).
Length = 323
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Frame = +1
Query: 157 SSSVCYKCNRTGHFARECTQ-GGVVSRDSGFNRQ-----REKCFKCNRTGHFARD 303
S+ + ++ N G + ECT+ G V S++S R RE+ +KC++ G F D
Sbjct: 200 SNHIRHRRNHFGERSFECTECGRVFSQNSHLIRHQKVHTRERTYKCSKCGKFFMD 254
>AB075827-1|BAB85533.1| 608|Homo sapiens KIAA1947 protein protein.
Length = 608
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Frame = +1
Query: 157 SSSVCYKCNRTGHFARECTQ-GGVVSRDSGFNRQ-----REKCFKCNRTGHFARD 303
S+ + ++ N G + ECT+ G V S++S R RE+ +KC++ G F D
Sbjct: 485 SNHIRHRRNHFGERSFECTECGRVFSQNSHLIRHQKVHTRERTYKCSKCGKFFMD 539
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,372,563
Number of Sequences: 237096
Number of extensions: 1295482
Number of successful extensions: 5470
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 4096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5095
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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