Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_P07
(458 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 88 3e-18
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 58 2e-09
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 58 2e-09
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 58 2e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 58 2e-09
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 58 2e-09
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 58 3e-09
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 55 3e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 55 3e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 55 3e-08
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 39 0.002
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 39 0.002
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 39 0.002
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 38 0.004
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 38 0.004
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 36 0.011
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 36 0.011
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 36 0.019
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 36 0.019
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 36 0.019
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 36 0.019
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 34 0.043
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 33 0.100
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 33 0.100
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 31 0.30
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 31 0.30
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 30 0.70
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 30 0.93
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 30 0.93
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 1.6
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 1.6
AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical ... 29 1.6
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 2.1
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 29 2.1
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 28 2.8
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 2.8
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 2.8
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 27 8.7
U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family ... 27 8.7
U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family ... 27 8.7
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 27 8.7
AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical ... 27 8.7
AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical ... 27 8.7
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 87.8 bits (208), Expect = 3e-18
Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 22/113 (19%)
Frame = +1
Query: 163 SVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEE--------- 315
S CY C TGHF+R+C +GG G C+ C GH++RDC
Sbjct: 35 STCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGY 94
Query: 316 -----------ADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNCP 435
+CY C +GHI+REC + S +E CY C +TGHI+R+CP
Sbjct: 95 GGRGGEGRSFGGQKCYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDCP 147
Score = 72.5 bits (170), Expect = 1e-13
Identities = 41/127 (32%), Positives = 52/127 (40%), Gaps = 30/127 (23%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEAD---- 321
MS CYKC + GH +R C G G C+ C TGHF+RDC +
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRG-GGGGSTCYNCQETGHFSRDCPKGGSGGGQ 59
Query: 322 --------RCYRCNGTGHIARECAQSPDE------------------PSCYNCNKTGHIA 423
CY C G GH +R+C + E CYNC ++GHI+
Sbjct: 60 RGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHIS 119
Query: 424 RNCPEGG 444
R C E G
Sbjct: 120 RECTESG 126
Score = 53.2 bits (122), Expect = 9e-08
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEAD 321
CY C R+GH +RECT+ G + + ++C++C TGH +RDC + +
Sbjct: 109 CYNCGRSGHISRECTESG--------SAEEKRCYQCQETGHISRDCPSQTN 151
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 58.4 bits (135), Expect = 2e-09
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +1
Query: 166 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCY 330
VCY C + GH +R+C + G SGF + F F + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 331 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 46.8 bits (106), Expect = 8e-06
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 283 TGHFARDCXEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 438
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 46.8 bits (106), Expect = 8e-06
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 283 TGHFARDCXEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 438
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = +1
Query: 253 QREKCFKCNRTGHFARDCXE-----EADRCYRCNGTGHIARECAQ 372
+ CF C + GH + DC E E CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = +1
Query: 253 QREKCFKCNRTGHFARDCXE-----EADRCYRCNGTGHIARECAQ 372
+ CF C + GH + DC E E CY C GH +R+C +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 15/108 (13%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNG-- 342
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 343 -----------TGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGR 447
G A + + C+NC GH + CPE R
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPR 473
Score = 36.7 bits (81), Expect = 0.008
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEE 315
C+ C + GH + +C + R+ C+ C + GH +RDC EE
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 300
Score = 33.9 bits (74), Expect = 0.057
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 15/110 (13%)
Frame = +1
Query: 166 VCYKCNRTGHFARECTQ--------GGVVSRDSGFNRQRE--KCFKCNRTGHFARDCXEE 315
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 316 A---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRE 450
+ + N G + Q E + C+NC + GH + +CPE +E
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKE 392
Score = 30.3 bits (65), Expect = 0.70
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPEGGRE 450
+C+NC + GH + +CPE +E
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKE 278
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 58.4 bits (135), Expect = 2e-09
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +1
Query: 166 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCY 330
VCY C + GH +R+C + G SGF + F F + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 331 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 46.8 bits (106), Expect = 8e-06
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 283 TGHFARDCXEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 438
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 46.8 bits (106), Expect = 8e-06
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 283 TGHFARDCXEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 438
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = +1
Query: 253 QREKCFKCNRTGHFARDCXE-----EADRCYRCNGTGHIARECAQ 372
+ CF C + GH + DC E E CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = +1
Query: 253 QREKCFKCNRTGHFARDCXE-----EADRCYRCNGTGHIARECAQ 372
+ CF C + GH + DC E E CY C GH +R+C +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 15/108 (13%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNG-- 342
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 343 -----------TGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGR 447
G A + + C+NC GH + CPE R
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPR 473
Score = 36.7 bits (81), Expect = 0.008
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEE 315
C+ C + GH + +C + R+ C+ C + GH +RDC EE
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 300
Score = 33.9 bits (74), Expect = 0.057
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 15/110 (13%)
Frame = +1
Query: 166 VCYKCNRTGHFARECTQ--------GGVVSRDSGFNRQRE--KCFKCNRTGHFARDCXEE 315
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 316 A---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRE 450
+ + N G + Q E + C+NC + GH + +CPE +E
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKE 392
Score = 30.3 bits (65), Expect = 0.70
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPEGGRE 450
+C+NC + GH + +CPE +E
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKE 278
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 58.4 bits (135), Expect = 2e-09
Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXE---EADRCYRCN 339
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 340 GTGHIARECAQSPDEP--SCYNCNKTGHIARNC 432
GH A +C Q P P C NC + GH A++C
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDC 654
Score = 46.8 bits (106), Expect = 8e-06
Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR------CY 330
C C GHFA +C Q V R C C + GHFA+DC E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 331 RCNGTGHIARECAQSPDE 384
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 43.6 bits (98), Expect = 7e-05
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +1
Query: 265 CFKCNRTGHFARDCXE-EADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARN 429
C C GH +++C + + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFAVD 630
Query: 430 CPE 438
C +
Sbjct: 631 CDQ 633
Score = 40.7 bits (91), Expect = 5e-04
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 277 NRTGHFARDCXEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPE 438
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ 610
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 58.4 bits (135), Expect = 2e-09
Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXE---EADRCYRCN 339
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 340 GTGHIARECAQSPDEP--SCYNCNKTGHIARNC 432
GH A +C Q P P C NC + GH A++C
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDC 654
Score = 46.8 bits (106), Expect = 8e-06
Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR------CY 330
C C GHFA +C Q V R C C + GHFA+DC E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 331 RCNGTGHIARECAQSPDE 384
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 43.6 bits (98), Expect = 7e-05
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +1
Query: 265 CFKCNRTGHFARDCXE-EADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARN 429
C C GH +++C + + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFAVD 630
Query: 430 CPE 438
C +
Sbjct: 631 CDQ 633
Score = 40.7 bits (91), Expect = 5e-04
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 277 NRTGHFARDCXEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPE 438
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ 610
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 58.4 bits (135), Expect = 2e-09
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +1
Query: 166 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCY 330
VCY C + GH +R+C + G SGF + F F + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 331 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 46.8 bits (106), Expect = 8e-06
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 283 TGHFARDCXEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 438
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 46.8 bits (106), Expect = 8e-06
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 283 TGHFARDCXEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 438
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = +1
Query: 253 QREKCFKCNRTGHFARDCXE-----EADRCYRCNGTGHIARECAQ 372
+ CF C + GH + DC E E CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = +1
Query: 253 QREKCFKCNRTGHFARDCXE-----EADRCYRCNGTGHIARECAQ 372
+ CF C + GH + DC E E CY C GH +R+C +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 15/108 (13%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNG-- 342
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 343 -----------TGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGR 447
G A + + C+NC GH + CPE R
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPR 473
Score = 36.7 bits (81), Expect = 0.008
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEE 315
C+ C + GH + +C + R+ C+ C + GH +RDC EE
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 300
Score = 33.9 bits (74), Expect = 0.057
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 15/110 (13%)
Frame = +1
Query: 166 VCYKCNRTGHFARECTQ--------GGVVSRDSGFNRQRE--KCFKCNRTGHFARDCXEE 315
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 316 A---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRE 450
+ + N G + Q E + C+NC + GH + +CPE +E
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKE 392
Score = 30.3 bits (65), Expect = 0.70
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPEGGRE 450
+C+NC + GH + +CPE +E
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKE 278
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 58.0 bits (134), Expect = 3e-09
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 11/112 (9%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR--- 324
++ S C+ C GH +C + S D CFKC H +C ++ +
Sbjct: 226 ITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGFP 278
Query: 325 ---CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRESA 456
C+ C GHI+R+C Q+ PD C C H+ R+CPE + A
Sbjct: 279 YATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPELAAQKA 330
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 54.8 bits (126), Expect = 3e-08
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Frame = +1
Query: 166 VCYKCNRTGHFARECTQG--------GVVSRDSGF-NRQREKCFKCNRTGHFARDCXEEA 318
VCY C + GH +RECT+ G +GF N F G F
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGF--GGDGGFGGGEERGP 241
Query: 319 DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 242 MKCFNCKGEGHRSAECPEPPR--GCFNCGEQGHRSNECP 278
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = +1
Query: 241 GFNRQREKCFKCNRTGHFARDCXE-----EADRCYRCNGTGHIARECAQ 372
G + CF C + GH + DC E E CY C GH +REC +
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 41.1 bits (92), Expect = 4e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 310 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 438
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 35.9 bits (79), Expect = 0.014
Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 17/110 (15%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEE-ADRCYRCNGT 345
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 346 GHIAR----------------ECAQSPDEPSCYNCNKTGHIARNCPEGGR 447
G A + C+NC GH + CPE R
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPR 262
Score = 29.9 bits (64), Expect = 0.93
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPEGGRE 450
+C+NC + GH + +CPE +E
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKE 179
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 54.8 bits (126), Expect = 3e-08
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Frame = +1
Query: 166 VCYKCNRTGHFARECTQG--------GVVSRDSGF-NRQREKCFKCNRTGHFARDCXEEA 318
VCY C + GH +RECT+ G +GF N F G F
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGF--GGDGGFGGGEERGP 241
Query: 319 DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 242 MKCFNCKGEGHRSAECPEPPR--GCFNCGEQGHRSNECP 278
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = +1
Query: 241 GFNRQREKCFKCNRTGHFARDCXE-----EADRCYRCNGTGHIARECAQ 372
G + CF C + GH + DC E E CY C GH +REC +
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 41.1 bits (92), Expect = 4e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 310 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 438
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 35.9 bits (79), Expect = 0.014
Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 17/110 (15%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEE-ADRCYRCNGT 345
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 346 GHIAR----------------ECAQSPDEPSCYNCNKTGHIARNCPEGGR 447
G A + C+NC GH + CPE R
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPR 262
Score = 29.9 bits (64), Expect = 0.93
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPEGGRE 450
+C+NC + GH + +CPE +E
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKE 179
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 54.8 bits (126), Expect = 3e-08
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Frame = +1
Query: 166 VCYKCNRTGHFARECTQG--------GVVSRDSGF-NRQREKCFKCNRTGHFARDCXEEA 318
VCY C + GH +RECT+ G +GF N F G F
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGF--GGDGGFGGGEERGP 241
Query: 319 DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 435
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 242 MKCFNCKGEGHRSAECPEPPR--GCFNCGEQGHRSNECP 278
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = +1
Query: 241 GFNRQREKCFKCNRTGHFARDCXE-----EADRCYRCNGTGHIARECAQ 372
G + CF C + GH + DC E E CY C GH +REC +
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 41.1 bits (92), Expect = 4e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 310 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 438
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 35.9 bits (79), Expect = 0.014
Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 17/110 (15%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEE-ADRCYRCNGT 345
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 346 GHIAR----------------ECAQSPDEPSCYNCNKTGHIARNCPEGGR 447
G A + C+NC GH + CPE R
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPR 262
Score = 29.9 bits (64), Expect = 0.93
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPEGGRE 450
+C+NC + GH + +CPE +E
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKE 179
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 160 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR-CYRC 336
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 628 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 680
Query: 337 NGTGHIARECAQSPDEPS 390
N GHIA C + + S
Sbjct: 681 NEMGHIAWNCPKKNENTS 698
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCXEEA-----DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 423
++C C + G C +++ +C C +G C + + +C+ CN+ GHIA
Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 687
Query: 424 RNCPE 438
NCP+
Sbjct: 688 WNCPK 692
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 160 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR-CYRC 336
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 531 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 583
Query: 337 NGTGHIARECAQSPDEPS 390
N GHIA C + + S
Sbjct: 584 NEMGHIAWNCPKKNENTS 601
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCXEEA-----DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 423
++C C + G C +++ +C C +G C + + +C+ CN+ GHIA
Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 590
Query: 424 RNCPE 438
NCP+
Sbjct: 591 WNCPK 595
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 160 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR-CYRC 336
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 542 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 594
Query: 337 NGTGHIARECAQSPDEPS 390
N GHIA C + + S
Sbjct: 595 NEMGHIAWNCPKKNENTS 612
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +1
Query: 259 EKCFKCNRTGHFARDCXEEA-----DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 423
++C C + G C +++ +C C +G C + + +C+ CN+ GHIA
Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 601
Query: 424 RNCPE 438
NCP+
Sbjct: 602 WNCPK 606
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 265 CFKCNRTGHFARDCXEEADRCYRCNGTGHIARECA 369
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 33.5 bits (73), Expect = 0.076
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 316 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPEGGRESA 456
+C+NC K GH A C RE A
Sbjct: 203 TCFNCKKYGHRATECSAPQRECA 225
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 160 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 306
S+ C+ C + GH A EC+ QRE C C H A +C
Sbjct: 201 SNTCFNCKKYGHRATECSA-----------PQRE-CANCGDPNHRANEC 237
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 265 CFKCNRTGHFARDCXEEADRCYRCNGTGHIARECA 369
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 33.5 bits (73), Expect = 0.076
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 316 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 432
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPEGGRESA 456
+C+NC K GH A C RE A
Sbjct: 203 TCFNCKKYGHRATECSAPQRECA 225
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 160 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 306
S+ C+ C + GH A EC+ QRE C C H A +C
Sbjct: 201 SNTCFNCKKYGHRATECSA-----------PQRE-CANCGDPNHRANEC 237
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 36.3 bits (80), Expect = 0.011
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 286 GHFARDCXEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 441
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 36.3 bits (80), Expect = 0.011
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 286 GHFARDCXEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 441
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 35.5 bits (78), Expect = 0.019
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 322 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 450
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +1
Query: 262 KCFKCNRTG-HFARDCXE---EADRCYRCNGTGHIARECAQ 372
+CF+C + H A+ C +A CY C H++ C +
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.019
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 322 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 450
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +1
Query: 262 KCFKCNRTG-HFARDCXE---EADRCYRCNGTGHIARECAQ 372
+CF+C + H A+ C +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.019
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 322 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 450
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +1
Query: 262 KCFKCNRTG-HFARDCXE---EADRCYRCNGTGHIARECAQ 372
+CF+C + H A+ C +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.019
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 322 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 450
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +1
Query: 262 KCFKCNRTG-HFARDCXE---EADRCYRCNGTGHIARECAQ 372
+CF+C + H A+ C +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 35.5 bits (78), Expect = 0.019
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCPEG 441
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.9 bits (69), Expect = 0.23
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 154 MSSSVCYKCNRTGHFARECTQG 219
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 265 CFKCNRTGHFARDCXE-EADRCYRCNGTGHI 354
C+KC + GH +R+C E+D R G G +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36
Score = 27.5 bits (58), Expect = 5.0
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +1
Query: 316 ADR-CYRCNGTGHIAREC 366
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 34.3 bits (75), Expect = 0.043
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = +1
Query: 265 CFKCNRTGHFARDCXEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARN 429
C C+ GH A C + R N H + + PD+ + CY C + GH A
Sbjct: 206 CHNCHERGHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 430 CPEG 441
C +G
Sbjct: 265 CHKG 268
Score = 31.9 bits (69), Expect = 0.23
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 14/93 (15%)
Frame = +1
Query: 127 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQR-------EK------- 264
A +KP + C+ C+ GH A C +R + + R +K
Sbjct: 192 AVSHAKPTYSQAITCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVT 251
Query: 265 CFKCNRTGHFARDCXEEADRCYRCNGTGHIARE 363
C+KC GH+A C + A + N T H+A E
Sbjct: 252 CYKCGEKGHYANRCHKGA-LAFLSN-TAHLAHE 282
Score = 27.5 bits (58), Expect = 5.0
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 388 SCYNCNKTGHIARNCP 435
+C+NC++ GH A CP
Sbjct: 205 TCHNCHERGHKATTCP 220
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 33.1 bits (72), Expect = 0.100
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = -2
Query: 454 QTPAPPRDSSVRCG-PSCCSCNMTARPGSVRTRALCAQCRYICSNGQPLXCNPSQSVLCG 278
QT P CG P C C V T C C+ +C+N C CG
Sbjct: 76 QTCCPSAPPPCSCGTPGCMQCVQQTVLVPVTTTTCCKCCQPVCTNA----CTNGGGCSCG 131
Query: 277 CT 272
CT
Sbjct: 132 CT 133
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 33.1 bits (72), Expect = 0.100
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 325 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGG 444
CY+C GH++++C QS N KT H N E G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVG 351
Score = 32.3 bits (70), Expect = 0.17
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 385 PSCYNCNKTGHIARNCPEGGRES 453
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGF-NRQRE 261
CYKC GH +++C Q S +SG NR+ E
Sbjct: 313 CYKCKVVGHVSKDCPQS---STNSGVTNRKTE 341
Score = 26.6 bits (56), Expect = 8.7
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 265 CFKCNRTGHFARDCXEEA 318
C+KC GH ++DC + +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 31.5 bits (68), Expect = 0.30
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +1
Query: 352 IARECAQ--SPDEPSCYNCNKTGHIARNCPE 438
+ R+C Q +P + C+ C++ GH +CP+
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQ 1372
Score = 31.1 bits (67), Expect = 0.40
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = +1
Query: 202 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTGHIARECAQSPD 381
R+C QG + +RQ C +C+R GHF C + A AR+ S
Sbjct: 1344 RKCNQGSAPT-----DRQ---CHQCHRIGHFVESCPQRA--------LAKEARKRFGSNS 1387
Query: 382 EPSCYNCNKTGHIARNCPEGG 444
S Y N +G +N EGG
Sbjct: 1388 TNSSYRSNDSGRGFKNGEEGG 1408
Score = 30.3 bits (65), Expect = 0.70
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVV--SRDSGFNRQREKCFKCNRTGHFARDCXEEADR 324
C++C+R GHF C Q + +R + ++ N +G ++ E DR
Sbjct: 1357 CHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEGGDR 1410
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 31.5 bits (68), Expect = 0.30
Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 163 SVCYKCNRTGHFAR--ECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRC 336
S C C+ T H R EC R+ CF C R+GH C C C
Sbjct: 312 SPCIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKC-SRPRTCNHC 370
Query: 337 NGTGH 351
G H
Sbjct: 371 KGNHH 375
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 30.3 bits (65), Expect = 0.70
Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Frame = +1
Query: 202 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTGHIARECAQSPD 381
R C Q + + GF K C+ G DC +++ +C C G R+C Q
Sbjct: 825 RRCDQCAIGTY--GFGPSGCKKCDCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQCQP 881
Query: 382 E----PSCYNCNKTGH 417
P C C H
Sbjct: 882 GFWGFPECRTCQCNDH 897
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.9 bits (64), Expect = 0.93
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 276
C+ C GH AR C + + G+ Q C
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSC 611
Score = 27.1 bits (57), Expect = 6.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 391 CYNCNKTGHIARNC 432
C+ C GH+ARNC
Sbjct: 576 CHYCKNVGHMARNC 589
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 250 RQREKCFKCNRTGHFARDCXEEA 318
R + +C C GH AR+C ++A
Sbjct: 571 RFKGQCHYCKNVGHMARNCKKKA 593
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +1
Query: 160 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADR 324
+ +C +C + G C+ + + R +CF C GH + C + DR
Sbjct: 578 NGICAECKQVGGHEPSCS---LAPKTWKRERPPPQCFTCGEMGHISTYCPKRIDR 629
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +1
Query: 325 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 438
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = -2
Query: 418 CGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQPLXCNPSQSVLCGC 275
C P CC C RP T C C+ +P C CGC
Sbjct: 69 CRPRCCCC---CRPKCCCTCCRTCCCTRCCTCCRPCCCGCGCGCGCGC 113
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 310 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 417
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical
protein Y59E9AL.5 protein.
Length = 99
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Frame = -2
Query: 412 PSCCSCNMTARPGSVRTRAL----CAQCRYICSNGQPLXCNPSQSVLCGCT 272
P+CC+C M + S T+ C C S + C+P S C CT
Sbjct: 49 PTCCACWMRRKKESTTTKVCVQDDCTTCS-CTSASRCSRCSPCCSGCCSCT 98
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = -2
Query: 421 RCGPSCCSCNMTARPGSVRTRALCA-QCRYICSNGQPLXCNPSQSVLCGC 275
+C C T S + C+ C C+ + C P Q+ CGC
Sbjct: 263 QCQQQCQQQCQTRTTASQQCAPACSTSCNQSCNQPAQMACQPMQNSQCGC 312
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = +1
Query: 346 GHIARECAQSPDEPSCYNCNKTGH----IARNCPE 438
GH R+C D P Y C K G I +NCP+
Sbjct: 55 GHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 169 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCN-GT 345
CY C + GH A EC + D N +R+ + + R + D Y + T
Sbjct: 411 CYYCGKRGHTANECRR---KKSDESQNGERQDPSQSEQIAALRRQLAMQNDDPYSSDEST 467
Query: 346 GHIARECAQSPDEPS 390
++ C + ++P+
Sbjct: 468 EALSLSCQKPKEDPT 482
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.3 bits (60), Expect = 2.8
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Frame = +1
Query: 187 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CXEEADRCYRCNGTGH 351
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 352 IARECAQSPDEPSCYNC--NKTGHIARNC 432
+ + P+ CY C N G +C
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESC 1973
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.3 bits (60), Expect = 2.8
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Frame = +1
Query: 187 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CXEEADRCYRCNGTGH 351
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 352 IARECAQSPDEPSCYNC--NKTGHIARNC 432
+ + P+ CY C N G +C
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESC 1973
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 28.3 bits (60), Expect = 2.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 391 CYNCNKTGHIARNCPE 438
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.3 bits (60), Expect = 2.8
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Frame = +1
Query: 187 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CXEEADRCYRCNGTGH 351
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 352 IARECAQSPDEPSCYNC--NKTGHIARNC 432
+ + P+ CY C N G +C
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESC 1973
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.3 bits (60), Expect = 2.8
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Frame = +1
Query: 187 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CXEEADRCYRCNGTGH 351
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 352 IARECAQSPDEPSCYNC--NKTGHIARNC 432
+ + P+ CY C N G +C
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESC 1973
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +1
Query: 172 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTGH 351
Y C G+ A + Q + + GF QR + + G D + C R NGT +
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 352 IAREC 366
C
Sbjct: 338 NDGRC 342
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +1
Query: 172 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTGH 351
Y C G+ A + Q + + GF QR + + G D + C R NGT +
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 352 IAREC 366
C
Sbjct: 338 NDGRC 342
>U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform a protein.
Length = 95
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +1
Query: 253 QREKCFKCNRTGHFARDCXEEADR----CYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 420
+ KC KC ++ + A + + C++CN + C +P E Y C K H
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY-C-KQCHG 64
Query: 421 ARNCPEG 441
+ P+G
Sbjct: 65 RKFGPKG 71
>U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform b protein.
Length = 113
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +1
Query: 253 QREKCFKCNRTGHFARDCXEEADR----CYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 420
+ KC KC ++ + A + + C++CN + C +P E Y C K H
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY-C-KQCHG 64
Query: 421 ARNCPEG 441
+ P+G
Sbjct: 65 RKFGPKG 71
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +1
Query: 172 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEEADRCYRCNGTGH 351
Y C G+ A + Q + + GF QR + + G D + C R NGT +
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 352 IAREC 366
C
Sbjct: 338 NDGRC 342
>AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2b protein.
Length = 700
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +1
Query: 301 DCXEEADRCYRCNGTGH-IARECAQSPDEPSCYNCNKTGHIARNCP 435
D +E C CN H + + PD + C K H+ CP
Sbjct: 249 DVADEMVFCDMCNTCVHMVCAGIEELPDPAEPWKCAKCAHMGTPCP 294
>AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2a protein.
Length = 741
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +1
Query: 301 DCXEEADRCYRCNGTGH-IARECAQSPDEPSCYNCNKTGHIARNCP 435
D +E C CN H + + PD + C K H+ CP
Sbjct: 290 DVADEMVFCDMCNTCVHMVCAGIEELPDPAEPWKCAKCAHMGTPCP 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,145,187
Number of Sequences: 27780
Number of extensions: 198132
Number of successful extensions: 996
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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