Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_P06
(631 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 57 1e-08
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 57 1e-08
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 57 1e-08
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 57 1e-08
U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with ta... 57 1e-08
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 57 1e-08
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 57 1e-08
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 57 1e-08
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 33 0.13
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 4.8
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 4.8
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 4.8
AF017812-1|AAB70559.1| 191|Caenorhabditis elegans histone H1.2 ... 27 8.4
AF017811-1|AAB70666.1| 191|Caenorhabditis elegans histone H1.2 ... 27 8.4
AC084197-2|AAM44399.1| 241|Caenorhabditis elegans Histone h1 li... 27 8.4
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPXGGAKKIVTNKL 629
+S +GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P KIV+ KL
Sbjct: 320 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKL 374
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKIENRK 536
KS +GS+DNA +KP GG V+ K
Sbjct: 379 KSKVGSMDNAAHKPAGGNVQRSGSK 403
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPXGGAKKIVTNKL 629
+S +GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P KIV+ KL
Sbjct: 320 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKL 374
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAK-NEAYTPXGGAKKIVTNKL 629
KS +GS+DNA +KP GG V+I ++KL + K+ +K N + P GG +I K+
Sbjct: 379 KSKVGSMDNAAHKPAGGNVQILSQKLNW-KAESKVGSKDNMNHRPGGGNVQIFDEKI 434
Score = 33.9 bits (74), Expect = 0.096
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 447 NLKAVKSXIGSLDNATYKPGGGKVKIENRKLEF 545
N KA +S +GS DN ++PGGG V+I + K+ +
Sbjct: 405 NWKA-ESKVGSKDNMNHRPGGGNVQIFDEKIRY 436
Score = 30.7 bits (66), Expect = 0.90
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3
Query: 420 VQVGNAPSPNLKAVKSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPXG 599
VQ+ N + A +GS N Y+P VKI + KL + + + N A+ P G
Sbjct: 338 VQIENRKL-DFSAASPKVGSKTN--YQPAKSDVKIVSEKLTWQAKSKVGSMDNAAHKPAG 394
Query: 600 GAKKIVTNKL 629
G +I++ KL
Sbjct: 395 GNVQILSQKL 404
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPXGGAKKIVTNKL 629
+S +GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P KIV+ KL
Sbjct: 298 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKL 352
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKI 524
KS +GS+DNA +KP GG V++
Sbjct: 357 KSKVGSMDNAAHKPAGGNVQV 377
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 420 VQVGNAPSPNLKAVKSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPXG 599
VQ+ N + A +GS N Y+P VKI + KL + + + N A+ P G
Sbjct: 316 VQIENRKL-DFSAASPKVGSKTN--YQPAKSDVKIVSEKLTWQAKSKVGSMDNAAHKPAG 372
Query: 600 GAKKIVTNKL 629
G +++++++
Sbjct: 373 GNVQVISSEV 382
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPXGGAKKIVTNKL 629
+S +GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P KIV+ KL
Sbjct: 298 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKL 352
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAK-NEAYTPXGGAKKIVTNKL 629
KS +GS+DNA +KP GG V+I ++KL + K+ +K N + P GG +I K+
Sbjct: 357 KSKVGSMDNAAHKPAGGNVQILSQKLNW-KAESKVGSKDNMNHRPGGGNVQIFDEKI 412
Score = 33.9 bits (74), Expect = 0.096
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 447 NLKAVKSXIGSLDNATYKPGGGKVKIENRKLEF 545
N KA +S +GS DN ++PGGG V+I + K+ +
Sbjct: 383 NWKA-ESKVGSKDNMNHRPGGGNVQIFDEKIRY 414
Score = 30.7 bits (66), Expect = 0.90
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3
Query: 420 VQVGNAPSPNLKAVKSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPXG 599
VQ+ N + A +GS N Y+P VKI + KL + + + N A+ P G
Sbjct: 316 VQIENRKL-DFSAASPKVGSKTN--YQPAKSDVKIVSEKLTWQAKSKVGSMDNAAHKPAG 372
Query: 600 GAKKIVTNKL 629
G +I++ KL
Sbjct: 373 GNVQILSQKL 382
>U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform d protein.
Length = 252
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPXGGAKKIVTNKL 629
+S +GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P KIV+ KL
Sbjct: 172 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKL 226
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKI 524
KS +GS+DNA +KP GG V++
Sbjct: 231 KSKVGSMDNAAHKPAGGNVQV 251
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPXGGAKKIVTNKL 629
+S +GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P KIV+ KL
Sbjct: 320 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKL 374
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAK-NEAYTPXGGAKKIVTNKL 629
KS +GS+DNA +KP GG V+I ++KL + K+ +K N + P GG +I K+
Sbjct: 379 KSKVGSMDNAAHKPAGGNVQILSQKLNW-KAESKVGSKDNMNHRPGGGNVQIFDEKI 434
Score = 33.9 bits (74), Expect = 0.096
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 447 NLKAVKSXIGSLDNATYKPGGGKVKIENRKLEF 545
N KA +S +GS DN ++PGGG V+I + K+ +
Sbjct: 405 NWKA-ESKVGSKDNMNHRPGGGNVQIFDEKIRY 436
Score = 30.7 bits (66), Expect = 0.90
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3
Query: 420 VQVGNAPSPNLKAVKSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPXG 599
VQ+ N + A +GS N Y+P VKI + KL + + + N A+ P G
Sbjct: 338 VQIENRKL-DFSAASPKVGSKTN--YQPAKSDVKIVSEKLTWQAKSKVGSMDNAAHKPAG 394
Query: 600 GAKKIVTNKL 629
G +I++ KL
Sbjct: 395 GNVQILSQKL 404
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPXGGAKKIVTNKL 629
+S +GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P KIV+ KL
Sbjct: 320 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKL 374
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKIENRK 536
KS +GS+DNA +KP GG V+ K
Sbjct: 379 KSKVGSMDNAAHKPAGGNVQRSGSK 403
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPXGGAKKIVTNKL 629
+S +GSL NAT+ GGG V+IENRKL+F +PK+ +K Y P KIV+ KL
Sbjct: 320 QSKVGSLKNATHVAGGGNVQIENRKLDFSAASPKVGSKTN-YQPAKSDVKIVSEKL 374
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 462 KSXIGSLDNATYKPGGGKVKI 524
KS +GS+DNA +KP GG V++
Sbjct: 379 KSKVGSMDNAAHKPAGGNVQV 399
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 420 VQVGNAPSPNLKAVKSXIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPXG 599
VQ+ N + A +GS N Y+P VKI + KL + + + N A+ P G
Sbjct: 338 VQIENRKL-DFSAASPKVGSKTN--YQPAKSDVKIVSEKLTWQAKSKVGSMDNAAHKPAG 394
Query: 600 GAKKIVTNKL 629
G +++++++
Sbjct: 395 GNVQVISSEV 404
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 381 PTPTEKKKVPMNKVQVGNAPSPNLKAVKSXIGSLDNATY 497
P PT K+K P + G+ P+P K KS I NA Y
Sbjct: 491 PPPTHKRKSPKKPRENGSVPTPTFKGRKSTIPVDPNAAY 529
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 381 PTPTEKKKVPMNKVQVGNAPSPNLKAVKSXIGSLDNATY 497
P PT K+K P + G+ P+P K KS I NA Y
Sbjct: 491 PPPTHKRKSPKKPRENGSVPTPTFKGRKSTIPVDPNAAY 529
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 186 KHNTXGDNDSGVDESTQGNDLNGSP 260
+HNT GD+ +E GN NGSP
Sbjct: 1850 EHNTNGDHCEFCNEGHYGNATNGSP 1874
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 186 KHNTXGDNDSGVDESTQGNDLNGSP 260
+HNT GD+ +E GN NGSP
Sbjct: 1850 EHNTNGDHCEFCNEGHYGNATNGSP 1874
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 186 KHNTXGDNDSGVDESTQGNDLNGSP 260
+HNT GD+ +E GN NGSP
Sbjct: 1850 EHNTNGDHCEFCNEGHYGNATNGSP 1874
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 186 KHNTXGDNDSGVDESTQGNDLNGSP 260
+HNT GD+ +E GN NGSP
Sbjct: 1850 EHNTNGDHCEFCNEGHYGNATNGSP 1874
>AF017812-1|AAB70559.1| 191|Caenorhabditis elegans histone H1.2
protein.
Length = 191
Score = 27.5 bits (58), Expect = 8.4
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Frame = +3
Query: 363 AKTPEIPTPTEKKKVPMN------KVQVGNAPSPNLKAVKSXIGSLDNATYKPGGGKVKI 524
A+TP + TPT+ K P + K +V A P + V + I SL +K
Sbjct: 7 AETPAVKTPTKAPKAPKSKTTKEPKAKVAAAHPPFINMVTAAISSLKERKGSSKIAILKY 66
Query: 525 ENRKLEFGNITPKIAAKNEAYTPXGGAKKIVTNKL 629
+ G+ KI ++ A G A K + +
Sbjct: 67 ITANYKVGDQLTKINSRLRAALNKGVASKALVQSV 101
>AF017811-1|AAB70666.1| 191|Caenorhabditis elegans histone H1.2
protein.
Length = 191
Score = 27.5 bits (58), Expect = 8.4
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Frame = +3
Query: 363 AKTPEIPTPTEKKKVPMN------KVQVGNAPSPNLKAVKSXIGSLDNATYKPGGGKVKI 524
A+TP + TPT+ K P + K +V A P + V + I SL +K
Sbjct: 7 AETPAVKTPTKAPKAPKSKTTKEPKAKVAAAHPPFINMVTAAISSLKERKGSSKIAILKY 66
Query: 525 ENRKLEFGNITPKIAAKNEAYTPXGGAKKIVTNKL 629
+ G+ KI ++ A G A K + +
Sbjct: 67 ITANYKVGDQLTKINSRLRAALNKGVASKALVQSV 101
>AC084197-2|AAM44399.1| 241|Caenorhabditis elegans Histone h1 like
protein 2, isoforma protein.
Length = 241
Score = 27.5 bits (58), Expect = 8.4
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Frame = +3
Query: 363 AKTPEIPTPTEKKKVPMN------KVQVGNAPSPNLKAVKSXIGSLDNATYKPGGGKVKI 524
A+TP + TPT+ K P + K +V A P + V + I SL +K
Sbjct: 57 AETPAVKTPTKAPKAPKSKTTKEPKAKVAAAHPPFINMVTAAISSLKERKGSSKIAILKY 116
Query: 525 ENRKLEFGNITPKIAAKNEAYTPXGGAKKIVTNKL 629
+ G+ KI ++ A G A K + +
Sbjct: 117 ITANYKVGDQLTKINSRLRAALNKGVASKALVQSV 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,609,235
Number of Sequences: 27780
Number of extensions: 278862
Number of successful extensions: 802
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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