Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_P02
         (560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   1.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.2  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   7.2  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   9.6  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 62  LH*VLTTNKCAGNFIRALQIVSEKVVDDFANYNKI 166
           L+  L ++K +   IR   ++   + D+ AN+NKI
Sbjct: 139 LNKALESSKISVGLIRDTAVLYRLLADNVANFNKI 173


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 262 HRSGHTVYIYTLT 224
           HR GH + +++LT
Sbjct: 239 HRRGHEIAVFSLT 251


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 262 HRSGHTVYIYTLT 224
           HR GH + +++LT
Sbjct: 246 HRRGHEIAVFSLT 258


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 550 PASKXRKKSNKGTYQFRSFS 491
           P  +  K++  G Y++RS S
Sbjct: 268 PPHEVEKRAQDGQYEYRSLS 287


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 520 KGTYQFRSFSFTYEAQKWSG 461
           KGTY FR+     E   W G
Sbjct: 361 KGTYAFRTPDENGEGGAWVG 380


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,627
Number of Sequences: 336
Number of extensions: 2692
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)