Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_P02
         (560 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0012 + 22145111-22146388                                         34   0.089
04_04_1342 + 32775582-32775796,32776589-32776794,32777356-327774...    27   7.7  

>04_04_0012 + 22145111-22146388
          Length = 425

 Score = 33.9 bits (74), Expect = 0.089
 Identities = 19/58 (32%), Positives = 23/58 (39%)
 Frame = +2

Query: 350 PEDDEXNIRAKEQGILNXXXXXXXXXXXXXXXXXXXXTRPFLSLISKAKAAKLVRSLV 523
           P      +R KE  I N                     RPF SLI KAK AK+VR ++
Sbjct: 39  PSSSAEALRTKELAITNLTNYLTKENRAEELRNLLTQLRPFFSLIPKAKTAKIVRGII 96


>04_04_1342 +
           32775582-32775796,32776589-32776794,32777356-32777492,
           32778758-32778860,32778961-32779079,32779282-32779346,
           32779426-32779642,32779713-32779934
          Length = 427

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 113 LQIVSEKVVDDFANYNKITKKSVPL 187
           L I S+KV+ + ANY   +  S+PL
Sbjct: 367 LDIPSDKVISNLANYGNTSAASIPL 391


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,254,688
Number of Sequences: 37544
Number of extensions: 279154
Number of successful extensions: 492
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)