Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_P01
(370 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0633 + 16416913-16417009,16417976-16418060,16418398-164185... 44 5e-05
12_02_1200 + 26937624-26937674,26937913-26938005,26938582-269387... 41 3e-04
08_02_1441 - 27116242-27116354,27116646-27116742,27116841-271170... 41 3e-04
04_04_1111 - 30979334-30979479,30979769-30979866,30980364-309804... 40 6e-04
07_03_0151 - 14465479-14465675,14466280-14466401,14466934-144670... 37 0.004
02_05_0835 - 32099966-32100111,32100418-32100465,32100673-321007... 37 0.006
07_03_0551 + 19374405-19374541,19375201-19375435,19375539-193757... 34 0.030
07_03_0808 - 21668100-21669092 28 2.6
09_04_0496 + 18079905-18081586,18084825-18084868,18086396-180865... 27 3.5
01_06_0049 - 25953811-25954131,25954223-25954903 27 3.5
01_06_1435 + 37351653-37351990,37352241-37352424 27 4.6
12_02_0224 - 15874958-15875311 27 6.1
02_01_0429 - 3132848-3135043 27 6.1
02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,311... 27 6.1
02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178 27 6.1
01_01_0356 - 2814175-2815401 27 6.1
12_02_0778 + 23074463-23076411,23076859-23077072,23077824-230778... 26 8.1
06_01_0866 + 6582131-6583294 26 8.1
05_03_0614 - 16206005-16206586,16207585-16207608,16209746-162098... 26 8.1
03_04_0230 - 19024413-19024574,19024916-19024995,19025200-19025509 26 8.1
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309... 26 8.1
02_05_0045 - 25393185-25394431,25394837-25395166,25395450-25396386 26 8.1
>05_03_0633 +
16416913-16417009,16417976-16418060,16418398-16418551,
16418808-16419023,16419105-16419241,16419317-16419408,
16419622-16419804,16421722-16421819,16422021-16422070,
16424605-16424756,16424944-16425069,16426315-16426523
Length = 532
Score = 43.6 bits (98), Expect = 5e-05
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 31 VVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEE 159
VVTKYK A I+N L+ V++ C P A +ICE GD + ++
Sbjct: 20 VVTKYKDAADIINNALKLVVSLCKPKAKIVDICEKGDSYIRDD 62
>12_02_1200 +
26937624-26937674,26937913-26938005,26938582-26938728,
26940299-26940379,26940711-26940849,26940977-26941013,
26941095-26941202,26941434-26941533,26941638-26941783,
26941862-26941953,26942086-26942180,26942435-26942531,
26942623-26942766,26942912-26943129,26943213-26943323
Length = 552
Score = 41.1 bits (92), Expect = 3e-04
Identities = 30/107 (28%), Positives = 52/107 (48%)
Frame = +1
Query: 10 KRLQKDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFKKEKD 189
+RLQK + + A ++ +V + + + P ++CE LE + KE
Sbjct: 233 ERLQKPMY-NAVRRAAEVHRQVRKHMRSILKPGMLMIDLCE-----TLENMVRKLIKENG 286
Query: 190 SKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLXKIDLGAHIAG 330
+ GIAF T S+N H++P + + +L+ D+ K+D G HI G
Sbjct: 287 LQAGIAFPTGCSLNWVAAHWTPNSGDKT-VLQYDDVMKLDFGTHIDG 332
>08_02_1441 -
27116242-27116354,27116646-27116742,27116841-27117058,
27117279-27117422,27117512-27117608,27117932-27118026,
27118140-27118231,27118326-27118471,27118565-27118664,
27118857-27118964,27119040-27119085,27119210-27119345,
27119847-27120044
Length = 529
Score = 40.7 bits (91), Expect = 3e-04
Identities = 30/107 (28%), Positives = 51/107 (47%)
Frame = +1
Query: 10 KRLQKDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFKKEKD 189
+RLQK + + A ++ +V + + + P ++CE LE + KE
Sbjct: 177 ERLQKPMY-NAVRRAAEVHRQVRKYMRSILKPGMLMIDLCE-----TLENMVRKLIKENG 230
Query: 190 SKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLXKIDLGAHIAG 330
+ GIAF T S+N H++P + +L+ D+ K+D G HI G
Sbjct: 231 LEAGIAFPTGCSLNCVAAHWTPNGGDKT-VLQYDDVMKLDFGTHING 276
>04_04_1111 -
30979334-30979479,30979769-30979866,30980364-30980443,
30980685-30980756,30980860-30980901,30981009-30981170,
30981276-30981427,30981453-30981538,30981654-30981726,
30982706-30982889
Length = 364
Score = 39.9 bits (89), Expect = 6e-04
Identities = 31/121 (25%), Positives = 50/121 (41%)
Frame = +1
Query: 4 SKKRLQKDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFKKE 183
S+ ++ + + K A ++ RVLE P + EI + K++++
Sbjct: 133 SEIQMHDKVSIIHMKAACELAARVLEYAGTLVKPSVTTDEIDKAVHKMIIDAGAY---PS 189
Query: 184 KDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLXKIDLGAHIAGIXXXXXXXXNC 363
G S C SVN CICH P + E L+ GD+ ID+ ++ G C
Sbjct: 190 PLGYGGFPKSVCTSVNECICHGIPDSRE----LQDGDIINIDVTVYLNGYHGDTSKTFLC 245
Query: 364 G 366
G
Sbjct: 246 G 246
>07_03_0151 -
14465479-14465675,14466280-14466401,14466934-14467081,
14467146-14467167,14467299-14467393,14467395-14467438,
14467750-14467841,14467911-14467982,14468188-14468229,
14468333-14468494,14468631-14468683,14468808-14468925,
14468974-14469150,14469573-14469639,14470195-14470273,
14473805-14473862,14474257-14474346,14474429-14474540,
14474649-14474912,14475361-14475463,14476200-14476278,
14476748-14476852
Length = 766
Score = 37.1 bits (82), Expect = 0.004
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 199 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLXKIDLGAHIAGIXXXXXXXXNCG 366
G S C SVN CICH P +L+ GD+ ID+ ++ G CG
Sbjct: 465 GFPKSVCTSVNECICHGIP----DSRVLQNGDIINIDVTVYLNGYHGDTSRTYLCG 516
>02_05_0835 -
32099966-32100111,32100418-32100465,32100673-32100770,
32101269-32101348,32101615-32101686,32102260-32102301,
32102382-32102543,32102971-32103199,32103681-32103747,
32103907-32104003
Length = 346
Score = 36.7 bits (81), Expect = 0.006
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +1
Query: 199 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLXKIDLGAHIAGIXXXXXXXXNCG 366
G S C SVN CICH P S P L+ GD+ ID+ ++ G CG
Sbjct: 161 GFPKSVCTSVNECICHGIP-DSRP---LEDGDIINIDVTVYLNGYHGDTSATFLCG 212
>07_03_0551 +
19374405-19374541,19375201-19375435,19375539-19375700,
19375778-19375819,19375941-19376012,19376291-19376370,
19376962-19377059,19377691-19377738,19377983-19378083,
19378331-19378426,19378599-19378689,19379510-19379706,
19380918-19381004,19381208-19381488,19381653-19381743
Length = 605
Score = 34.3 bits (75), Expect = 0.030
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 199 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLXKIDLGAHIAGIXXXXXXXXNCG 366
G S C S+N C+CH P +++ L+ GD+ +D+ + G CG
Sbjct: 154 GFPKSICTSLNECVCHGVPDSTQ----LQTGDIMNVDVNVFLNGYHGGASRTFVCG 205
>07_03_0808 - 21668100-21669092
Length = 330
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 152 NTSLSPNSHISLADASGTHFAMTCSRTRFTICPA 51
+ S P+S S + A+G F TC TR++ P+
Sbjct: 172 SASPRPSSPESFSSATGARFRSTCFSTRYSAIPS 205
>09_04_0496 +
18079905-18081586,18084825-18084868,18086396-18086502,
18087069-18087674,18087789-18088013,18088102-18088167,
18088268-18088336,18088511-18088582,18088672-18088848,
18089978-18090115
Length = 1061
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +3
Query: 210 FNMRFCEQLHLSLFAHCERTGLHSEKRRFXQDRSWCSH 323
F C + L LFA E TGL K F + CSH
Sbjct: 288 FTANGCSEKALELFARMEITGLVPNKITFNTVLNACSH 325
>01_06_0049 - 25953811-25954131,25954223-25954903
Length = 333
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 200 PFLESFSFLKTLLVSSNTSLSPNSHISLAD 111
PF SF F ++++ SLSP+S SL D
Sbjct: 45 PFSPSFGFSSPSPLATSVSLSPSSSASLVD 74
>01_06_1435 + 37351653-37351990,37352241-37352424
Length = 173
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 152 WRRLTRFSKRRKTPRK-ALHFQHAFL 226
WR ++RFS R +TP + A H Q F+
Sbjct: 127 WRNISRFSVRTRTPTQVASHAQKYFI 152
>12_02_0224 - 15874958-15875311
Length = 117
Score = 26.6 bits (56), Expect = 6.1
Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Frame = -1
Query: 325 QCEHQDLSWXNLLFSECNPVRSQ----WAKSDKCSCSQKRMLKMQCLSWSLSP 179
Q ++LSW +C+ + + WA C C + + W L P
Sbjct: 24 QQREEELSWAKRTVGDCSCISGEEEASWANRTDCGCGRGEEEAQRWREWHLPP 76
>02_01_0429 - 3132848-3135043
Length = 731
Score = 26.6 bits (56), Expect = 6.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 221 THVENAMPFLESFSFLKTLLVSSN 150
T++ A+ L+SFS LKTLL+ N
Sbjct: 412 TNITKALYILKSFSNLKTLLLGGN 435
>02_01_0425 -
3102629-3104692,3106505-3108546,3109918-3109989,
3110157-3111444
Length = 1821
Score = 26.6 bits (56), Expect = 6.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 221 THVENAMPFLESFSFLKTLLVSSN 150
T++ A+ L+SFS LKTLL+ N
Sbjct: 835 TNITKALYILKSFSNLKTLLLGGN 858
>02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178
Length = 1143
Score = 26.6 bits (56), Expect = 6.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 221 THVENAMPFLESFSFLKTLLVSSN 150
T++ NA+ L S S L TLL+S+N
Sbjct: 411 TNITNALQILRSSSKLTTLLISNN 434
>01_01_0356 - 2814175-2815401
Length = 408
Score = 26.6 bits (56), Expect = 6.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 285 FQNVIRFARNGRKVTNAVVHRNA 217
F +++RF+ GR +AVVHR A
Sbjct: 203 FLDLLRFSLAGRSTPSAVVHRGA 225
>12_02_0778 +
23074463-23076411,23076859-23077072,23077824-23077887,
23077930-23078008,23078181-23078303,23078805-23078919
Length = 847
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 294 ISFFQNVIRFARNGRKVTNAVVHRNAC*KCNAFLGVFLLFENL 166
+ FQ +++ VT + + NAC +CN+F LL E L
Sbjct: 624 LELFQKMVQQGVRPNVVTFSAI-LNACSRCNSFEDAALLLEQL 665
>06_01_0866 + 6582131-6583294
Length = 387
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 188 SFSFLKTLLVSSNTSLSPNSHISLADASGTHF 93
+F+ L L SS +SLS SH+ LA +G F
Sbjct: 122 NFTSLNISLRSSGSSLSIPSHLRLAGLAGPRF 153
>05_03_0614 -
16206005-16206586,16207585-16207608,16209746-16209879,
16210703-16210832
Length = 289
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 152 NTSLSPNSHISLADASGTHFAMTCSRTRFTICP 54
+T LSP S +S + + T +CS T T P
Sbjct: 145 STPLSPMSSVSCSSTASTLVTRSCSLTSTTFAP 177
>03_04_0230 - 19024413-19024574,19024916-19024995,19025200-19025509
Length = 183
Score = 26.2 bits (55), Expect = 8.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 238 CSCSQKRMLKMQCLSWSLSPF 176
CSC + R +K + + W L PF
Sbjct: 65 CSCLKIRGMKQETMRWKLFPF 85
>03_04_0090 +
17228253-17228403,17229062-17229129,17229238-17230902,
17231002-17231143,17231648-17232399
Length = 925
Score = 26.2 bits (55), Expect = 8.1
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -1
Query: 355 CMSYNSYKSQQCEHQDLSWXNLLFSECNPVRSQWAKSDKCSCSQKR 218
C S++S + Q+LS+ N P RS KS KCS ++ +
Sbjct: 101 CSSFSSTDINRPIQQELSYINKERFAGKPPRSSQTKSVKCSKTEAK 146
>02_05_0045 - 25393185-25394431,25394837-25395166,25395450-25396386
Length = 837
Score = 26.2 bits (55), Expect = 8.1
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = -1
Query: 352 MSYNSYKSQQCEHQDLSWXNLLFSECNPVRSQWAKSDKCSCSQKRM 215
MSYN Y LSW N S Q+A D+ SC RM
Sbjct: 221 MSYNDYYVDNATDLFLSWTNT--SNIQEALVQFAIMDQPSCEIARM 264
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,523,631
Number of Sequences: 37544
Number of extensions: 177564
Number of successful extensions: 549
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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