Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_P01
(370 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31371| Best HMM Match : Peptidase_M24 (HMM E-Value=0) 143 5e-35
SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14) 52 1e-07
SB_13773| Best HMM Match : TolA (HMM E-Value=0.042) 29 1.6
SB_916| Best HMM Match : GatB_Yqey (HMM E-Value=9.5) 28 2.7
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 27 3.6
SB_3142| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.6
SB_44844| Best HMM Match : DUF164 (HMM E-Value=0.094) 27 4.8
SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 27 4.8
SB_54381| Best HMM Match : Trigger_C (HMM E-Value=0.55) 27 6.3
SB_40922| Best HMM Match : JmjC (HMM E-Value=0.092) 27 6.3
SB_1402| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_46095| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_13244| Best HMM Match : HGTP_anticodon (HMM E-Value=1e-21) 27 6.3
SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012) 26 8.3
SB_7791| Best HMM Match : SSDP (HMM E-Value=0.41) 26 8.3
SB_34342| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_12330| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_4496| Best HMM Match : PAN (HMM E-Value=2.7) 26 8.3
>SB_31371| Best HMM Match : Peptidase_M24 (HMM E-Value=0)
Length = 465
Score = 143 bits (346), Expect = 5e-35
Identities = 63/105 (60%), Positives = 80/105 (76%)
Frame = +1
Query: 16 LQKDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFKKEKDSK 195
+ +D+VVTKYK+AG + NR+L ++I +AR +CE GD L+LEET+KV+KKEK+ K
Sbjct: 16 IAEDVVVTKYKMAGDMANRILLKLIEAANAGTTARTLCEKGDALILEETDKVYKKEKELK 75
Query: 196 KGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLXKIDLGAHIAG 330
KGIAF TC+SVNNC+CHFSP+ SEPD L GDL KID G HI G
Sbjct: 76 KGIAFPTCISVNNCVCHFSPLLSEPDITLNDGDLVKIDFGVHIDG 120
Score = 26.6 bits (56), Expect = 6.3
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 329 GFIAVVAHTVIVG 367
GFIAV+ HT++VG
Sbjct: 120 GFIAVIGHTIVVG 132
>SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14)
Length = 708
Score = 52.0 bits (119), Expect = 1e-07
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +1
Query: 124 ICEFGDKLVLEETNKVFKKEKDSK--KGIAFSTCVSVNNCICHFSPIASEPDYILKKGDL 297
+C+ G+ ++ET + ++ E D K KG+AF T S+N+C H++P A + +L D+
Sbjct: 82 LCDVGE--AIQETMESYEVELDGKTYKGLAFPTGCSLNHCAAHYTPNAGDKT-VLSYDDV 138
Query: 298 XKIDLGAHIAG 330
KID G HI G
Sbjct: 139 CKIDFGTHING 149
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 202 IAFSTCVSVNNCICHFSPIASEPDYILKKGDLXKIDLGAHIAG 330
+AF T S+N+C H++P A + +L D+ KID G HI G
Sbjct: 2 LAFPTGCSLNHCAAHYTPNAGDKT-VLSYDDVCKIDFGTHING 43
>SB_13773| Best HMM Match : TolA (HMM E-Value=0.042)
Length = 1558
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 7 KKRLQKDLVVTKYKLAGQIVNRV-LEQVIAKCVPDASAREICEFGDKLVLEETNKVFKKE 183
++R + + ++ LA ++ R L +AK A E+ E G K +LEE + F+KE
Sbjct: 844 RERFKNSHIRSEAVLAAKLAARKRLRAEMAK--EKAMKNELKEMGKKQILEEKERKFRKE 901
Query: 184 KDSKKG 201
+ ++G
Sbjct: 902 MELQEG 907
>SB_916| Best HMM Match : GatB_Yqey (HMM E-Value=9.5)
Length = 238
Score = 27.9 bits (59), Expect = 2.7
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 221 THVENAMPFLESFSFLKTLLVSSNTSLSP 135
TH ++ + F E+F+FL++L ++ T P
Sbjct: 147 THQDDILAFRENFAFLRSLYLTDGTDTPP 175
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 144 TCIGGD*QGFQKGERLQERHCIFNMRFCEQLHLSLFAHCERTGLHSEKRRFXQDR 308
T I D + Q+ E E + ++ QL L A ER G HS+ R +DR
Sbjct: 2422 TTIQSDYKKLQERESELEIELLSALKRVSQLEHELQAEKERAGGHSDSNRALEDR 2476
>SB_3142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2209
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = -3
Query: 233 LFTETHVENAMPFLESFSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRF 66
+FTE + +++++ +K +L + + LS NS +++ AS TH C R+ +
Sbjct: 419 IFTEGRRDTFRFAIDTWASVKEVLELTLSCLS-NSDVNIEHASTTHVLKICGRSEY 473
>SB_44844| Best HMM Match : DUF164 (HMM E-Value=0.094)
Length = 332
Score = 27.1 bits (57), Expect = 4.8
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 7 KKRLQKDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETN-KVFKKE 183
KKRL+++L KYKL + + V A D E + +KL L E+ + FK+E
Sbjct: 87 KKRLEEELASVKYKLTA-LESEVKALSNAN---DRQEEEKQKLAEKLALVESKVQSFKEE 142
Query: 184 KDSKK 198
D K
Sbjct: 143 LDDSK 147
>SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 376
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = -2
Query: 126 YFSC*CVWNA---FCDDLLKDSVHYLSC 52
YF+C C A FC L+K +HY C
Sbjct: 345 YFNCKCRGQASHFFCSGLMKCQLHYWEC 372
>SB_54381| Best HMM Match : Trigger_C (HMM E-Value=0.55)
Length = 607
Score = 26.6 bits (56), Expect = 6.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 43 YKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFKK 180
YK+ ++ N+V + V K + + + E +K+ + TNKV KK
Sbjct: 203 YKVNNKVTNKVTKNVTNKVTNNVTNKVTNEVTNKVNNKVTNKVTKK 248
>SB_40922| Best HMM Match : JmjC (HMM E-Value=0.092)
Length = 403
Score = 26.6 bits (56), Expect = 6.3
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 131 NLAINLYWRRLTRFSK 178
NLA+N++W R T+F++
Sbjct: 255 NLAVNIWWARFTQFNQ 270
>SB_1402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 26.6 bits (56), Expect = 6.3
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 4 SKKRLQKDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEET 162
+K+R K + TK++ +V + K +P+ S + C+ KL+ EE+
Sbjct: 60 TKRRNTKHRINTKHRTVTCVVTNGVSIWHIKLLPEESELQYCDVDTKLLSEES 112
>SB_46095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 26.6 bits (56), Expect = 6.3
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 4 SKKRLQKDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEET 162
+K+R K + TK++ +V + K +P+ S + C+ KL+ EE+
Sbjct: 60 TKRRNTKHRINTKHRTVTCVVTNGVSIWHIKLLPEESELQYCDVDTKLLSEES 112
>SB_13244| Best HMM Match : HGTP_anticodon (HMM E-Value=1e-21)
Length = 518
Score = 26.6 bits (56), Expect = 6.3
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 70 RVLEQVIAKC-VPDASAREICEFGDKLVLEETNKVFKKEKDSKKGI 204
R+L+ + A C VP+ R IC DKL + T + +KE +KG+
Sbjct: 238 RLLDGMFAVCGVPEGKFRTICSAVDKLD-KATWEEVRKEMVDEKGL 282
>SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012)
Length = 704
Score = 26.2 bits (55), Expect = 8.3
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 118 REICEFGDKLVLEETNKVFKKEKDSKKG 201
R +C FG++LVL N+V + ++ G
Sbjct: 538 RSVCTFGERLVLSMLNRVVMRYQEHFPG 565
>SB_7791| Best HMM Match : SSDP (HMM E-Value=0.41)
Length = 901
Score = 26.2 bits (55), Expect = 8.3
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 86 SSQNAFQTHQQEKYVNLAINLYWRRLTRFSKRRKTPRK 199
S +A HQQ Y L NL+ R+TR P K
Sbjct: 857 SQPSAAPGHQQPNYAGLRGNLWITRITRKKPNYPLPHK 894
>SB_34342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 26.2 bits (55), Expect = 8.3
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = -3
Query: 236 QLFTETHVENAMPFLESFSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTIC 57
Q + H + AM + K L V+ + S + I + + ++ RTRF +
Sbjct: 39 QCLKKEHCDAAMLIFANVPGAKKLAVTCCNTESMSEKIPVNEEMTFSKVISYLRTRFNLN 98
Query: 56 PANLYLVTTKS 24
+L+L+ TKS
Sbjct: 99 ERDLWLIDTKS 109
>SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 26.2 bits (55), Expect = 8.3
Identities = 23/64 (35%), Positives = 32/64 (50%)
Frame = +1
Query: 121 EICEFGDKLVLEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLX 300
EI E D L+LE N + +E +K A S++ C+ I PD ILK+ L
Sbjct: 435 EITEL-DSLLLE--NCILTEEDFKRKNWANFHLRSLSLINCNLESI---PDAILKQSSLK 488
Query: 301 KIDL 312
K+DL
Sbjct: 489 KLDL 492
>SB_12330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 26.2 bits (55), Expect = 8.3
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = +1
Query: 133 FGDKLVLE----ETNKVFKKEKDSKKGIAFSTCVSVN 231
FG K+V+ TNK K +KD+K+ A V++N
Sbjct: 331 FGSKVVIRTDVFSTNKYCKTKKDAKQNAAMVAVVALN 367
>SB_4496| Best HMM Match : PAN (HMM E-Value=2.7)
Length = 170
Score = 26.2 bits (55), Expect = 8.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 364 HNYCMSYNSYKSQQCEHQDLSWXNLLFSECNPVRSQ 257
H CM + Y Q C+ + L++ L S RSQ
Sbjct: 123 HTQCMGFTLYGGQSCDDKSLTFCELRGSVDRAGRSQ 158
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,315,107
Number of Sequences: 59808
Number of extensions: 215345
Number of successful extensions: 667
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 594991920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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