Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_O23
(466 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 175 3e-43
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 158 5e-38
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 155 6e-37
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 146 2e-34
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 144 1e-33
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 124 1e-27
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 123 2e-27
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 118 5e-26
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 117 1e-25
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 115 6e-25
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 111 1e-23
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 109 3e-23
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 109 4e-23
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 100 1e-20
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 100 3e-20
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 96 3e-19
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 79 4e-14
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 64 1e-09
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 59 5e-08
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 54 2e-06
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 53 4e-06
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 53 4e-06
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 45 7e-04
UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1; Meth... 35 0.76
UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:... 34 1.8
UniRef50_A5GMY9 Cluster: Aldo/keto reductase family protein; n=2... 33 3.1
UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finge... 32 7.1
UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011; ... 32 7.1
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 175 bits (427), Expect = 3e-43
Identities = 82/109 (75%), Positives = 91/109 (83%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT+KRRN GR+K GRGH + VRCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASVY
Sbjct: 1 MTKKRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYE 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPPKSNFPRDMSRP 377
+ LPKLYAKLHYCVSCAIHSKVVRNRS + R+ RTPP P M +P
Sbjct: 61 GYPLPKLYAKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFKPGAMRKP 109
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 158 bits (384), Expect = 5e-38
Identities = 72/98 (73%), Positives = 81/98 (82%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIV AAAVRDI++ SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 344
+ LPKLY KLHYCVSCAIHSKVVRNRS + + RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 155 bits (375), Expect = 6e-37
Identities = 70/113 (61%), Positives = 83/113 (73%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT KRRNGGR KH RGHV +RC+NC +C PKDKAIK+F++RNIV AA+RD+ +ASVY
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPPKSNFPRDMSRPQAVQ 389
+ LPKLYAK YCVSCAIHS VVR RS +RR+RTPP R P+ Q
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQ 113
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 146 bits (355), Expect = 2e-34
Identities = 64/99 (64%), Positives = 80/99 (80%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
M +KR + GR K GRGHVK VRC NC++ +PKDKAIK+ IRNIV AAAVRD+++ASVYP
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPPK 347
+ LPK Y KLHYCVSCAIH+++VR RS +DR+ R PP+
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQ 99
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 144 bits (348), Expect = 1e-33
Identities = 68/113 (60%), Positives = 83/113 (73%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT KRRN GR+K GRGH + VRC++C RCVPKDKAIK++ I+NIV AAAVRDI+D S
Sbjct: 1 MTSKRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALT 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPPKSNFPRDMSRPQAVQ 389
++LPK Y KL YCVSC IH +VVR RS DRR R PPK + ++ QAV+
Sbjct: 61 KYKLPKTYMKLEYCVSCGIHGRVVRVRSRTDRRNRLPPK-RVVKKTNKQQAVK 112
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 124 bits (299), Expect = 1e-27
Identities = 56/65 (86%), Positives = 60/65 (92%)
Frame = +3
Query: 198 VRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPPKSNFPRDMSRP 377
+RDIN+ASVY FQLPKLYAKLHYCVSCAIHSKVVRNRS KDRRIRTPPK+ FPRDM+RP
Sbjct: 17 LRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFPRDMARP 76
Query: 378 QAVQR 392
Q VQR
Sbjct: 77 QNVQR 81
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 123 bits (296), Expect = 2e-27
Identities = 61/107 (57%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
Frame = +3
Query: 66 RNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLP 245
RN RAK G H++ +RCTN A+ VPKDKAIKKF+IRN+V AAAVRDI++ASV+ + LP
Sbjct: 1 RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLP 60
Query: 246 K--LYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPPKSNFPRDMSRPQ 380
K LY KL+YCV CAIH KVVRN K + +T P P + PQ
Sbjct: 61 KLYLYVKLNYCVRCAIHGKVVRNPPCKAHKDQTHPPRFRPSRSAAPQ 107
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 118 bits (285), Expect = 5e-26
Identities = 52/97 (53%), Positives = 68/97 (70%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
M KRRN GR+K RGH + V C NC R VPKDKAI +F I+N+V A++ +D++DA +Y
Sbjct: 1 MPVKRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQ 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTP 341
++LPK Y K +YCVSCA+H VVR R+ RR R P
Sbjct: 61 GYELPKTYQKQYYCVSCAVHRHVVRPRNVNVRRNRVP 97
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 117 bits (281), Expect = 1e-25
Identities = 60/113 (53%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
M KRRN GR K +GH VRCTNC R V KDKAIK+F RN+V A++ RDI + Y
Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYA 60
Query: 231 M--FQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPPKSNFPRDMSRPQA 383
F +PK+Y KL YCVSCAIH+++VR RS +DRR R K R RP+A
Sbjct: 61 QSDFTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHRYTTKL---RQHVRPEA 110
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 115 bits (276), Expect = 6e-25
Identities = 53/103 (51%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
M KRRN GR++ RGH + V CTNC R V KDKA+K++ +R++V ++ RDI +
Sbjct: 79 MPVKRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFE 138
Query: 231 MFQ--LPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPPKSN 353
+ +PKLY KL YC+SCAIHS+VVR R +DRRIR PP N
Sbjct: 139 NEKQGIPKLYVKLQYCISCAIHSRVVRVRCAEDRRIRRPPIRN 181
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 111 bits (266), Expect = 1e-23
Identities = 54/87 (62%), Positives = 65/87 (74%)
Frame = +3
Query: 81 AKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAK 260
AK G GHV+ V C + A C+PKDKAIK F+I+NI+ AAAVRDI+ A+V+ + LP LY K
Sbjct: 12 AKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVK 70
Query: 261 LHYCVSCAIHSKVVRNRSXKDRRIRTP 341
LHYCVSCAIHS+VVRN K RR P
Sbjct: 71 LHYCVSCAIHSEVVRNHLLKLRRTEHP 97
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 109 bits (262), Expect = 3e-23
Identities = 49/59 (83%), Positives = 55/59 (93%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVY 227
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 109 bits (261), Expect = 4e-23
Identities = 54/106 (50%), Positives = 71/106 (66%), Gaps = 4/106 (3%)
Frame = +3
Query: 51 MTRKRRNGGRAK--HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDAS- 221
MT KRRN GR+K H RG VK + C NC R PKDKA+ +FV+R ++ AA+ RD+ +AS
Sbjct: 1 MTTKRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASP 60
Query: 222 VY-PMFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPPKSNF 356
VY F +PKLY K +C++CAIHS+ VR R +R+IR K F
Sbjct: 61 VYGANFPMPKLYMKQRFCIACAIHSRTVRARPVGNRKIRYTKKVPF 106
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 100 bits (240), Expect = 1e-20
Identities = 44/95 (46%), Positives = 66/95 (69%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT+KRRN GR+K RG V+ + C + VPKDKAI ++VI+NIV +++RD+ D+ +Y
Sbjct: 1 MTKKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYE 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIR 335
+ +PKLY K + + AIH+++VR RS DR+ R
Sbjct: 61 YYTMPKLYYKNTFSIESAIHNRIVRVRSKADRKKR 95
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 99.5 bits (237), Expect = 3e-20
Identities = 44/82 (53%), Positives = 61/82 (74%)
Frame = +3
Query: 102 VKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 281
VK V C + VPKDKA+++F++RNIV +AA+RD+ ++ + + LPKLY K++Y +S
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSISA 186
Query: 282 AIHSKVVRNRSXKDRRIRTPPK 347
AIHSKVVR RS + RRIR PPK
Sbjct: 187 AIHSKVVRVRSREARRIRDPPK 208
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 96.3 bits (229), Expect = 3e-19
Identities = 40/91 (43%), Positives = 62/91 (68%)
Frame = +3
Query: 63 RRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQL 242
RRN GR K RG +++C C PKDKAIK+F I++++ A+ D+ A++Y +F++
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 243 PKLYAKLHYCVSCAIHSKVVRNRSXKDRRIR 335
P++ K +CVSCA H+K+VR RS + R+IR
Sbjct: 62 PRMGYKSQFCVSCACHAKIVRVRSSQARKIR 92
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 79.4 bits (187), Expect = 4e-14
Identities = 36/94 (38%), Positives = 56/94 (59%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
M +KRRN GR+K+ RGHV + C + VP+DKAIKK ++++ ++D + V P
Sbjct: 1 MVKKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLP 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRI 332
++ PKLY+ + Y +S A K ++ K RRI
Sbjct: 61 GYKAPKLYSYVFYSISSAFSQKFIKPGRKKYRRI 94
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 64.5 bits (150), Expect = 1e-09
Identities = 32/57 (56%), Positives = 39/57 (68%)
Frame = +3
Query: 93 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKL 263
R +V+ + NC + +PKDKA KKFV RNIV AAAVRDI +A+V LPK Y KL
Sbjct: 34 RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL 90
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 58.8 bits (136), Expect = 5e-08
Identities = 31/108 (28%), Positives = 54/108 (50%)
Frame = +3
Query: 57 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMF 236
+KR+N GR K +G V C NC + +P+ KA++ V + + +++
Sbjct: 7 KKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI--- 63
Query: 237 QLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPPKSNFPRDMSRPQ 380
+P+ Y YCV+CAI+ +++ RS +R+ + P R RPQ
Sbjct: 64 -VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKP----ILRGQQRPQ 106
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 53.6 bits (123), Expect = 2e-06
Identities = 39/84 (46%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Frame = +3
Query: 57 RKRRNGGRAKHGR--GHVKAVRCT-NCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVY 227
R RR+ G+ K GR G + V+ N C+ KDKA KFVI+NIV AAA+R
Sbjct: 3 RMRRDEGKGKKGRSQGLLWPVKAAANFTGCMTKDKA-NKFVIQNIVEAAAIR-------- 53
Query: 228 PMFQLPKLYAKLHYCVSCAIHSKV 299
Y KLH CVSCAIH KV
Sbjct: 54 -------FYVKLHCCVSCAIHIKV 70
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 52.8 bits (121), Expect = 4e-06
Identities = 25/97 (25%), Positives = 49/97 (50%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
M +KR+N GR K +G + C NC + +P+ KA++ V + V R++
Sbjct: 1 MPKKRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAI- 59
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTP 341
+ + YC++CA+ +++ RS ++R+ + P
Sbjct: 60 ---ISRYLVTKTYCINCAVFFGIIKVRSREERKKKIP 93
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 52.8 bits (121), Expect = 4e-06
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDI-NDASVY 227
M +KR + GR K +G V+C NC R VP DKAI + + V ++ ++
Sbjct: 1 MPKKRESRGRRKGAKGKAGTVQCDNCGRVVPADKAICVTRMYSPVDPQLAEELEKKGAII 60
Query: 228 PMFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRR 329
+ + K YCVSCA+H +V+ R + R+
Sbjct: 61 MRYPVTKC-----YCVSCAVHYGIVKIRPEEQRK 89
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 45.2 bits (102), Expect = 7e-04
Identities = 32/100 (32%), Positives = 47/100 (47%)
Frame = -3
Query: 350 TLGRSTDSSVFXRSVPDNFAVDGA*HAXXXXXXXXXXXEHWVYRGIVNISDRRRXYDVPN 171
+L RS+DSSV S +N +VD A + V RG ISD DV +
Sbjct: 30 SLWRSSDSSVSSGSDSNNSSVDSARNTVVQLVVGLWKSIFSVDRGFRQISDSSSFNDVSD 89
Query: 170 HELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALTSH 51
D LVLW+ V S +VT+++L ++ ++L H
Sbjct: 90 SHSLDGLVLWNRSGTVDTSDRLDVTSTLLVSTVGSSLLWH 129
>UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1;
Methanopyrus kandleri|Rep: Zn-ribbon containing protein
- Methanopyrus kandleri
Length = 87
Score = 35.1 bits (77), Expect = 0.76
Identities = 24/80 (30%), Positives = 34/80 (42%)
Frame = +3
Query: 45 RNMTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASV 224
RN RK R+G + RG V C C VP+ KAI I + ++D V
Sbjct: 3 RNPRRKGRDGWKQSKSRGKPSFVTCECCGGKVPRHKAIPWTQGFRITDPVVRQAVDDRYV 62
Query: 225 YPMFQLPKLYAKLHYCVSCA 284
+ + K++YC CA
Sbjct: 63 HTFSR------KVYYCPKCA 76
>UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:
NEQ043 - Nanoarchaeum equitans
Length = 84
Score = 33.9 bits (74), Expect = 1.8
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +3
Query: 105 KAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCA 284
K VRC C R +PK+KA + N+ ++++ V +F + K++ C SCA
Sbjct: 11 KTVRCYYCGRILPKEKAYVIYTKPNVAG-----ELSENEVIAVFSQKR---KIYVCPSCA 62
Query: 285 IHSKVVRNR 311
H + +R
Sbjct: 63 RHRGIKDHR 71
>UniRef50_A5GMY9 Cluster: Aldo/keto reductase family protein; n=21;
Cyanobacteria|Rep: Aldo/keto reductase family protein -
Synechococcus sp. (strain WH7803)
Length = 385
Score = 33.1 bits (72), Expect = 3.1
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 18 RSLFTGSEVRNMTRKRRNG-GRAKHGRGHVKAVRCTNCARCVPK 146
R+L G ++R +R N GRA H VKA C +C C+P+
Sbjct: 314 RNLTLGHDLREFAEERYNLIGRAGHWWETVKADACAHCGDCLPR 357
>UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finger
protein 646; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to Zinc finger protein 646 - Monodelphis
domestica
Length = 1709
Score = 31.9 bits (69), Expect = 7.1
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 9 FSXRSLFTGSEVRNMTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKK 164
+S R + + +RR GR + G G AVRC C +P+ ++++
Sbjct: 1369 YSNRMALKNHQRLHSESRRRRAGRVRRGGGPRVAVRCALCGHSLPRRGSLER 1420
>UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 53.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 31.9 bits (69), Expect = 7.1
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 114 RCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAK 260
R N ++C+PKDK++ ++V N + +RDI +VY + + KL K
Sbjct: 170 RGINESKCIPKDKSLNEYVENNPI-KFTIRDI--VTVYSISDIKKLMMK 215
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,717,683
Number of Sequences: 1657284
Number of extensions: 6500586
Number of successful extensions: 15401
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 15000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15387
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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