Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_O23
         (466 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...   198   6e-53
AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like p...    25   0.99 
AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like p...    25   0.99 
AY341233-1|AAR13797.1|  196|Anopheles gambiae transferrin-like p...    25   0.99 
AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like p...    25   0.99 
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    25   0.99 
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             22   9.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   9.2  

>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score =  198 bits (484), Expect = 6e-53
 Identities = 91/111 (81%), Positives = 99/111 (89%)
 Frame = +3

Query: 60  KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 239
           +RRNGGR KH RGHVKAVRCTNCARCVPKDKAIKKFVIRNIV AAAVRDI+DASVY  + 
Sbjct: 3   ERRNGGRCKHNRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYV 62

Query: 240 LPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPPKSNFPRDMSRPQAVQR 392
           LPKLYAKLHYCVSCAIHSKVVRNRS + RRIRTPP+ +FP+DM+R Q  QR
Sbjct: 63  LPKLYAKLHYCVSCAIHSKVVRNRSKETRRIRTPPQRSFPKDMNRQQNAQR 113


>AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 25.4 bits (53), Expect = 0.99
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +3

Query: 84  KHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDIND 215
           K G+GH +  +  N   C P+   I      N+  +  + D N+
Sbjct: 50  KEGKGHDRFEKLRNAKACFPEFGGIASIAFVNVGRSRGIFDRNE 93


>AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 25.4 bits (53), Expect = 0.99
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +3

Query: 84  KHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDIND 215
           K G+GH +  +  N   C P+   I      N+  +  + D N+
Sbjct: 50  KEGKGHDRFEKLRNAKACFPEFGGIASIAFVNVGRSRGIFDRNE 93


>AY341233-1|AAR13797.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 25.4 bits (53), Expect = 0.99
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +3

Query: 84  KHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDIND 215
           K G+GH +  +  N   C P+   I      N+  +  + D N+
Sbjct: 50  KEGKGHDRFEKLRNAKACFPEFGGIASIAFVNVGRSRGIFDRNE 93


>AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 25.4 bits (53), Expect = 0.99
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +3

Query: 84  KHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDIND 215
           K G+GH +  +  N   C P+   I      N+  +  + D N+
Sbjct: 50  KEGKGHDRFEKLRNAKACFPEFGGIASIAFVNVGRSRGIFDRNE 93


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 25.4 bits (53), Expect = 0.99
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 18  RSLFTGSEVRNMTRKRRNGGRAKHGRGHVKAVRCTNCARCV 140
           R L  G  VR      R+    + G  + KAV CTN  +C+
Sbjct: 238 RCLERGHMVRECQGTNRSSLCIRCGAANHKAVNCTNDVKCL 278


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 322 TEESVLLPRVTSLGTCHVHRQ 384
           T+ S+  PR+T   T HV+ +
Sbjct: 176 TDGSIFPPRITKNSTLHVYEK 196


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 16/75 (21%), Positives = 32/75 (42%)
 Frame = +3

Query: 126  CARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVR 305
            CA  V K + + ++ IR  + +    DI  ASV+   +         Y +   +   +  
Sbjct: 808  CATTVRKGRKLYQYTIRLPINSPWKEDILIASVFNECRPDAETVAYLYHIRMELICPIPE 867

Query: 306  NRSXKDRRIRTPPKS 350
             ++ + R+I  P +S
Sbjct: 868  EQNTRGRKIYAPEES 882


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 399,818
Number of Sequences: 2352
Number of extensions: 7698
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40395045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)