Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_O23
(466 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 171 8e-43
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 171 8e-43
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 171 8e-43
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 171 8e-43
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 171 8e-43
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 171 8e-43
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 171 8e-43
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 170 2e-42
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 169 3e-42
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 161 1e-39
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 158 8e-39
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 67 2e-11
AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26 p... 39 0.010
X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26 pro... 37 0.030
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 2.0
U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear o... 31 2.0
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 2.0
D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein. 31 2.0
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 2.0
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 2.0
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 2.0
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 2.0
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 2.0
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 2.0
BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein. 29 6.0
L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein. 29 7.9
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 171 bits (417), Expect = 8e-43
Identities = 78/98 (79%), Positives = 87/98 (88%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 344
+ LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 171 bits (417), Expect = 8e-43
Identities = 78/98 (79%), Positives = 87/98 (88%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 344
+ LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 171 bits (417), Expect = 8e-43
Identities = 78/98 (79%), Positives = 87/98 (88%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 344
+ LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 171 bits (417), Expect = 8e-43
Identities = 78/98 (79%), Positives = 87/98 (88%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 344
+ LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 171 bits (417), Expect = 8e-43
Identities = 78/98 (79%), Positives = 87/98 (88%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 344
+ LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 171 bits (417), Expect = 8e-43
Identities = 78/98 (79%), Positives = 87/98 (88%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 344
+ LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 171 bits (417), Expect = 8e-43
Identities = 78/98 (79%), Positives = 87/98 (88%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 344
+ LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 170 bits (413), Expect = 2e-42
Identities = 77/98 (78%), Positives = 86/98 (87%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 344
+ LPKLY KLHYCVSC IHSKVVRNRS + R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCVIHSKVVRNRSREARKDRTPP 98
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 169 bits (412), Expect = 3e-42
Identities = 77/98 (78%), Positives = 86/98 (87%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIV AAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 344
+ LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 161 bits (390), Expect = 1e-39
Identities = 74/98 (75%), Positives = 83/98 (84%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT+KRRN RAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIV AAAVRDI++ASV+
Sbjct: 1 MTKKRRNNVRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 344
+ LPKL KLHYCVSC IHSKVVRNRS + R+ RTPP
Sbjct: 61 AYVLPKLCVKLHYCVSCVIHSKVVRNRSREARKDRTPP 98
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 158 bits (384), Expect = 8e-39
Identities = 72/98 (73%), Positives = 81/98 (82%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYP 230
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIV AAAVRDI++ SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 231 MFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 344
+ LPKLY KLHYCVSCAIHSKVVRNRS + + RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 67.3 bits (157), Expect = 2e-11
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 234 FQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 344
+ LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 37
>AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26
protein.
Length = 23
Score = 38.7 bits (86), Expect = 0.010
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 162 KFVIRNIVXAAAVRDINDASVY 227
KFVIRNIV AAAVRDI++ASV+
Sbjct: 1 KFVIRNIVEAAAVRDISEASVF 22
>X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26
protein.
Length = 20
Score = 37.1 bits (82), Expect = 0.030
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 51 MTRKRRNGGRAKHGRGHVK 107
MT+KRRN GRAK GRGHV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQ 19
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 252 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 377
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear
orphan receptor protein.
Length = 587
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 252 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 377
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 307 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 350
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 252 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 377
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 404 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 447
>D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein.
Length = 143
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 252 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 377
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 46 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 89
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 252 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 377
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 252 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 377
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 252 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 377
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 252 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 377
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 252 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 377
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 252 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 377
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
>BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein.
Length = 1181
Score = 29.5 bits (63), Expect = 6.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 201 RDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRN 308
R + YPMFQ+P+ LH ++ H V RN
Sbjct: 372 RTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERN 407
>L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein.
Length = 1275
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 201 RDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRN 308
R + YPMFQ+P+ LH ++ H V RN
Sbjct: 372 RTLETFLTYPMFQIPRYILTLHDVLAHTPHEHVERN 407
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,370,714
Number of Sequences: 237096
Number of extensions: 1019758
Number of successful extensions: 2075
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2075
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -