Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_O21
(651 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 41 4e-05
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 40 7e-05
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 35 0.003
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 35 0.003
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 33 0.010
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 31 0.024
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 31 0.032
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 29 0.17
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 29 0.17
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 28 0.29
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 28 0.29
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 27 0.39
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 27 0.68
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 23 8.4
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 40.7 bits (91), Expect = 4e-05
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = -1
Query: 426 FGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPDLASXHSWYT 247
+G +T+ G ++E NL L+N G + N + S +DL+ C+P LAS +W
Sbjct: 128 WGSKSTNARGNAVLEHFSRLNLVLVNVGFCPTFVR-NSRTSIIDLTFCSPALASSMNWRV 186
Query: 246 SSXTFGSDH 220
S+ SDH
Sbjct: 187 SNAYTLSDH 195
Score = 25.8 bits (54), Expect = 1.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 102 NDVASYRPIALSSVLTKVAEHLVKNRL 22
+D ++ RP+AL K+ E L+ NRL
Sbjct: 465 DDASALRPLALIDNFAKILEILILNRL 491
Score = 23.8 bits (49), Expect = 4.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 158 VKYKLNNADWSAFKNLVESMMLP 90
VK N+A+W A + MM+P
Sbjct: 546 VKNAFNSANWEAIHAALSKMMIP 568
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 39.9 bits (89), Expect = 7e-05
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -1
Query: 444 NCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGS-PTRRTKPNEKPSAVDLSICTPDLA 268
N H +G + G L++++++ L +LN GS PT + +PS +D++ TP L
Sbjct: 125 NAWHTEWGSRRNNLRGEELLQMVEVLGLSILNNGSAPTFIGRGAARPSVIDVTFATPSLV 184
Query: 267 SXHSW 253
+W
Sbjct: 185 LHDTW 189
Score = 29.1 bits (62), Expect = 0.13
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 93 ASYRPIALSSVLTKVAEHLVKNRL 22
+SYRP+++ L KV E L+ NRL
Sbjct: 502 SSYRPLSMLDALGKVLEQLILNRL 525
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 34.7 bits (76), Expect = 0.003
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -1
Query: 444 NCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRT-KPNEKPSAVDLSICTPDLA 268
N H+ +G T G L+ ++ L +LN G+ + T + S +D++ +P +
Sbjct: 123 NAWHEAWGSARTKRKGEELLNTVEQLGLIVLNRGNTSTFTGRGIAGESVIDVTFASPSIV 182
Query: 267 SXHSWYTSSXTFGSDH 220
++W + SDH
Sbjct: 183 RYNTWEVLKSYWYSDH 198
Score = 27.5 bits (58), Expect = 0.39
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1
Query: 93 ASYRPIALSSVLTKVAEHLVKNRLEWF 13
+S+RP+ + + L KV E L+ NRL F
Sbjct: 508 SSFRPLGMLNGLGKVLERLILNRLNEF 534
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 34.7 bits (76), Expect = 0.003
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -1
Query: 363 LCLLNTGSPTRRTKPNEKPSAVDLSICTPDLASXHSWYTSSXTFGSDH 220
L LLN G+ + N + S VD+S C+P L ++W T SDH
Sbjct: 159 LVLLNQGNQSTWIGANGRNSIVDVSFCSPSLVGDNNWRVCDET-PSDH 205
Score = 31.9 bits (69), Expect = 0.018
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -1
Query: 93 ASYRPIALSSVLTKVAEHLVKNRL 22
+SYRPI L SVL K+ E L++ RL
Sbjct: 488 SSYRPICLLSVLGKILERLIQRRL 511
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 32.7 bits (71), Expect = 0.010
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 444 NCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGS-PTRRTKPNEKPSAVDLSICTPDLA 268
N H +G G L++++ L ++N+G+ PT + S +D+ TP +A
Sbjct: 145 NAWHTEWGSARNSQRGEDLLQLIQSVQLQVINSGNEPTFIGRGAATSSVIDVCFATPSIA 204
Query: 267 SXHSWYTSSXTFGSDH 220
+W SDH
Sbjct: 205 RPETWEVHEFA-RSDH 219
Score = 27.1 bits (57), Expect = 0.51
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 93 ASYRPIALSSVLTKVAEHLVKNR 25
+SYRP+ + L KV E L+ NR
Sbjct: 510 SSYRPLCMLDALGKVLERLILNR 532
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 31.5 bits (68), Expect = 0.024
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -1
Query: 132 LVCI*EPCRINDVA-SYRPIALSSVLTKVAEHLVKNRLEWF 13
LV I +P + + V+ SYRP+ + L KV E L+ NRL F
Sbjct: 474 LVLIPKPGKPSGVSCSYRPLCMLDALGKVLERLILNRLHEF 514
Score = 29.9 bits (64), Expect = 0.073
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = -1
Query: 444 NCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSP-TRRTKPNEKPSAVDLSICTPDLA 268
N H +G G L+ + +L +LN G+ T S VD++ TP +A
Sbjct: 126 NAWHVEWGSERNSEKGEELLSAIQQLDLVVLNQGTTSTFDGNGAATASIVDVAFATPTIA 185
Query: 267 SXHSWYTSSXTFGSDH 220
+W SDH
Sbjct: 186 QPGTWNVCGDYSYSDH 201
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 31.1 bits (67), Expect = 0.032
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = -1
Query: 426 FGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPDLASXHSWYT 247
+G T++ G ++E + L N G+ T N++ S VD++ C+ L+ +W
Sbjct: 126 WGSKRTNSRGDAVLESFARLGVTLGNAGT-TPTFNRNKRTSIVDITFCSTTLSERLNWRV 184
Query: 246 SSXTFGSDH 220
S SDH
Sbjct: 185 SDALTLSDH 193
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 28.7 bits (61), Expect = 0.17
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 93 ASYRPIALSSVLTKVAEHLVKNRL 22
+SYRP+ + L KV E L+ NRL
Sbjct: 548 SSYRPLCMLDALGKVLERLILNRL 571
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 28.7 bits (61), Expect = 0.17
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 93 ASYRPIALSSVLTKVAEHLVKNRL 22
+SYRP+ + L KV E L+ NRL
Sbjct: 563 SSYRPLCMLDALGKVLERLILNRL 586
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 27.9 bits (59), Expect = 0.29
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 90 SYRPIALSSVLTKVAEHLVKNRL 22
SYRP+ + L KV E L+ NRL
Sbjct: 556 SYRPLCMLDALGKVLEKLILNRL 578
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 27.9 bits (59), Expect = 0.29
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -1
Query: 90 SYRPIALSSVLTKVAEHLVKNRL 22
SYRPI+L S L K+ E L+++R+
Sbjct: 1 SYRPISLLSCLGKIFEKLLESRM 23
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 27.5 bits (58), Expect = 0.39
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -1
Query: 357 LLNTGSPTRRTKPNEKPSAVDLSICTPDLASXHSWYTSSXTFGSDH 220
LLN GS P + S VDL+ + +A W S SDH
Sbjct: 156 LLNDGSTPTYVGPG-RTSVVDLTFASRTVARSFKWEVLSSYMNSDH 200
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 26.6 bits (56), Expect = 0.68
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -1
Query: 363 LCLLNTGSPTRRTKPNEKPSAVDLSICTPDLASXHSWYTSSXTFGSDH 220
+ L+N G T T E+ SA+DL+ + L W SDH
Sbjct: 156 MVLMNNGQDTFVTP--ERKSAIDLTFVSQSLMETTGWEVLPDYMNSDH 201
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 23.0 bits (47), Expect = 8.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 93 ASYRPIALSSVLTKVAEHLVKNRL 22
+S+RPI L K E L+ NRL
Sbjct: 497 SSFRPICLLDNTGKALERLLLNRL 520
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,535
Number of Sequences: 2352
Number of extensions: 8789
Number of successful extensions: 30
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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