Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_O19
         (395 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006714-4|AAK29715.4|  357|Caenorhabditis elegans Hypothetical ...    35   0.018
Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z83234-5|CAB70171.2|  640|Caenorhabditis elegans Hypothetical pr...    27   3.7  
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr...    27   3.7  
Z48809-2|CAA88747.1|  406|Caenorhabditis elegans Hypothetical pr...    27   4.9  
AF106579-8|AAC78201.1|  710|Caenorhabditis elegans Hypothetical ...    27   4.9  
Z93384-1|CAB07633.3|  342|Caenorhabditis elegans Hypothetical pr...    26   8.5  
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr...    26   8.5  

>AC006714-4|AAK29715.4|  357|Caenorhabditis elegans Hypothetical
           protein Y119D3B.16 protein.
          Length = 357

 Score = 35.1 bits (77), Expect = 0.018
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
 Frame = +2

Query: 158 NQQSRTTTTKHHNPK-FKKERAQKFLKIXLPDFN--EDHTSYPPHKLRXXMKXKGVLP-- 322
           + +++     H N K F++ R +K L I LP+ +  E      P ++R  +  +G+ P  
Sbjct: 42  SNKAKANRNTHVNEKLFRRMRGRKTLLIELPEDSAREKEAEMSPGEMRTELLKRGINPYK 101

Query: 323 ---PRPWMERPFYISATGGVFEAYVP 391
              PR W E      +  G+ + YVP
Sbjct: 102 EAQPRVWNEAQVTFQSIYGIADPYVP 127


>Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical
           protein ZK970.6 protein.
          Length = 1122

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 179 TTKHHNPKFKKERAQKFLKI 238
           TTKHH+ +  KE  +KF+K+
Sbjct: 583 TTKHHSMQMNKEEKEKFVKL 602


>Z83234-5|CAB70171.2|  640|Caenorhabditis elegans Hypothetical
           protein K09E4.2 protein.
          Length = 640

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 352 IEWTLHPRSWWQNTLXLHXXPQFMWW 275
           + W ++P +WW + L LH     ++W
Sbjct: 386 LSWNVYPSTWWSSAL-LHVCHVIIFW 410


>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical protein
            F25C8.3a protein.
          Length = 3184

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 156  AISNLAQPQRNIITRSLKRNVLRNSLRXTFQILMKTT 266
            ++S L   +RN+ TR+ KRN+L ++ +   Q L K T
Sbjct: 1563 SLSTLYGMERNVSTRADKRNLLADNWQAKQQALRKQT 1599


>Z48809-2|CAA88747.1|  406|Caenorhabditis elegans Hypothetical
           protein T01E8.4 protein.
          Length = 406

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +2

Query: 143 LPLMCNQQSRTTTTKHHNPKFKKERAQKFLKIXLPDFNEDHTSYPPHK 286
           +PL+C    R   T  ++ KF   R +   K+ LPD    H  Y P K
Sbjct: 33  IPLVC----RRFNTILNDDKFWSRRIRTEQKVRLPDCELKHPEYEPKK 76


>AF106579-8|AAC78201.1|  710|Caenorhabditis elegans Hypothetical
           protein F54E2.5 protein.
          Length = 710

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 19/69 (27%), Positives = 36/69 (52%)
 Frame = -2

Query: 265 VVFIKIWKVYLKEFLSTFLFKLRVMMFRCGCARLLIAHQWQGLTLRRKTLIVAELAISFL 86
           V+ + +W  +       FL +L + +F   CA LLI +    L+L  K  + +E+  SF+
Sbjct: 426 VLIMLLWGYFKPMKFFWFLAQLTISVFIISCANLLI-NVPATLSLISKDSVQSEI-FSFI 483

Query: 85  YYFLNLYCH 59
            + ++ +CH
Sbjct: 484 SHLID-FCH 491


>Z93384-1|CAB07633.3|  342|Caenorhabditis elegans Hypothetical
           protein H08M01.1 protein.
          Length = 342

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 382 CFKDSTCSRYIEWTLHPRSWWQNTL 308
           C K   C++   W    R WWQ++L
Sbjct: 291 CLKMIGCAKCFRWWTVFRCWWQSSL 315


>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical protein
            F25C8.3b protein.
          Length = 3175

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +3

Query: 156  AISNLAQPQRNIITRSLKRNVLRNSLRXTFQILMKT 263
            ++S L   +RN+ TR+ KRN+L ++ +   Q L K+
Sbjct: 1563 SLSTLYGMERNVSTRADKRNLLADNWQAKQQALRKS 1598


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,439,197
Number of Sequences: 27780
Number of extensions: 146546
Number of successful extensions: 352
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)