Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_O14
(640 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 200 2e-50
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 200 2e-50
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 200 2e-50
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 163 3e-39
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 161 1e-38
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 159 4e-38
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 159 5e-38
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 146 4e-34
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 138 8e-32
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 120 3e-26
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 117 3e-25
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 101 1e-20
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 100 3e-20
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 98 1e-19
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 87 4e-16
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 85 1e-15
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 83 5e-15
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 82 1e-14
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 78 2e-13
UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal ... 75 1e-12
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 54 4e-06
UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15; Archa... 48 1e-04
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 48 3e-04
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 46 8e-04
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar... 44 0.003
UniRef50_A3H6X0 Cluster: Ribosomal protein L11; n=1; Caldivirga ... 40 0.067
UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3; ... 38 0.27
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.47
UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1; Nanoar... 36 0.62
UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4; Sophophora|... 34 3.3
UniRef50_A0FZB1 Cluster: Putative uncharacterized protein; n=2; ... 33 4.4
UniRef50_O70561 Cluster: Small proline-rich protein 2J; n=2; Mus... 33 5.8
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 200 bits (489), Expect = 2e-50
Identities = 92/107 (85%), Positives = 102/107 (95%)
Frame = +3
Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 302
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 303 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLE 443
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ +
Sbjct: 93 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFD 139
Score = 81.4 bits (192), Expect = 2e-14
Identities = 38/68 (55%), Positives = 49/68 (72%)
Frame = +1
Query: 400 KSRKISNTTATSPLKDVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLI 579
K +K + ++ I MR+RS+AR LSG++KEILGTAQSVGC V+GR PHD+I
Sbjct: 125 KKQKNIKHSGNITFDEIVNIVRQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDII 184
Query: 580 DDINSGAL 603
DDINSGA+
Sbjct: 185 DDINSGAV 192
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 200 bits (489), Expect = 2e-50
Identities = 92/107 (85%), Positives = 102/107 (95%)
Frame = +3
Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 302
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 303 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLE 443
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ +
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFD 107
Score = 83.0 bits (196), Expect = 5e-15
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 400 KSRKISNTTATSPLKDVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLI 579
K +K + ++ IA MR+RS+AR LSG++KEILGTAQSVGC V+GR PHD+I
Sbjct: 93 KKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDII 152
Query: 580 DDINSGAL 603
DDINSGA+
Sbjct: 153 DDINSGAV 160
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 200 bits (488), Expect = 2e-50
Identities = 93/107 (86%), Positives = 101/107 (94%)
Frame = +3
Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 302
MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKITV
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 202
Query: 303 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLE 443
LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI E
Sbjct: 203 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFE 249
Score = 80.2 bits (189), Expect = 4e-14
Identities = 35/70 (50%), Positives = 50/70 (71%)
Frame = +1
Query: 400 KSRKISNTTATSPLKDVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLI 579
K +K + +D+ IA +MR RSMAR L G+ KE+LGTAQSVGCTV+G+ PHD+I
Sbjct: 235 KKQKNIKHSGNIGFEDILAIARVMRPRSMARELKGTCKEVLGTAQSVGCTVDGKHPHDVI 294
Query: 580 DDINSGALTI 609
D++N G++ +
Sbjct: 295 DELNEGSIEV 304
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 163 bits (396), Expect = 3e-39
Identities = 77/109 (70%), Positives = 93/109 (85%), Gaps = 1/109 (0%)
Frame = +3
Query: 120 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKI 296
KMPPKFDPN + +R GGEVGA SSLAPKIGPLGLSPKKVG+DIAK T+ DWKGL++
Sbjct: 62 KMPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDWKGLRV 121
Query: 297 TVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLE 443
TV+LTVQNRQA+++VVP+A+AL+I+ALKEP +DRKK K I H GN SL+
Sbjct: 122 TVKLTVQNRQAKVSVVPTASALVIKALKEPFQDRKKVKGITHTGNCSLD 170
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1
Query: 424 TATSPLKDVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCT 549
T L D+ +A +MR +S A+ L+G+VKEILGTA+SVGCT
Sbjct: 164 TGNCSLDDIIEVARVMRPKSCAKNLAGTVKEILGTAKSVGCT 205
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 161 bits (391), Expect = 1e-38
Identities = 74/106 (69%), Positives = 89/106 (83%)
Frame = +3
Query: 120 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKIT 299
KMPPKFDPN+ V +R VGGEV AT+SLAPK+GPLGL+ KK+G+DIAK+T DWKGLK+T
Sbjct: 55 KMPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVT 114
Query: 300 VQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIS 437
QL V+NR A + V PS A+ +IRALKEPPRDRKK KNIKH+GNI+
Sbjct: 115 CQLRVKNRVATVIVTPSVASRLIRALKEPPRDRKKVKNIKHDGNIA 160
Score = 40.7 bits (91), Expect = 0.029
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 445 DVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTI 609
++ IA SM + V E+LGTA S+GCT++G P + + + G L +
Sbjct: 163 EILKIAKESAPNSMGASMKSVVMEVLGTAVSIGCTIDGEHPRAIQEKVQEGKLKV 217
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 159 bits (387), Expect = 4e-38
Identities = 79/131 (60%), Positives = 99/131 (75%), Gaps = 24/131 (18%)
Frame = +3
Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW------- 281
MPPKFDPNE+K+++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DW
Sbjct: 1 MPPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWVSTQYGC 60
Query: 282 -----------------KGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQK 410
KGL++TV+LT+QNRQA ++VVPSA++L+I+ALKEPPRDRKK+K
Sbjct: 61 CDARKEQWLTWTVSAVQKGLRVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEK 120
Query: 411 NIKHNGNISLE 443
NIKHN +I L+
Sbjct: 121 NIKHNKSIPLD 131
Score = 69.3 bits (162), Expect = 7e-11
Identities = 34/70 (48%), Positives = 45/70 (64%)
Frame = +1
Query: 400 KSRKISNTTATSPLKDVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLI 579
K K + PL D+ IA MR+RS+A+ L G+V EILGTA SVGC V+GR P D+
Sbjct: 117 KKEKNIKHNKSIPLDDIIEIARTMRSRSLAKELKGTVLEILGTAFSVGCQVDGRSPKDVS 176
Query: 580 DDINSGALTI 609
DD+ +G + I
Sbjct: 177 DDVKAGEIDI 186
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 159 bits (386), Expect = 5e-38
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +3
Query: 159 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 338
V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+QNRQAQI
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 165
Query: 339 VVPSAAALIIRALKEPPRDRKKQKN 413
VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 166 VVPSASALIIKALKEPPRDRKKQKN 190
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 146 bits (354), Expect = 4e-34
Identities = 65/96 (67%), Positives = 83/96 (86%)
Frame = +3
Query: 159 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 338
V +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT+QNRQA+I
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIE 84
Query: 339 VVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLER 446
VVP++A+++++ L E PRDRKK KNIKHNGN+ +E+
Sbjct: 85 VVPTSASMVLKELNEAPRDRKKVKNIKHNGNLKIEQ 120
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +1
Query: 406 RKISNTTATSPLK--DVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLI 579
+K+ N LK V IA M+ +S A+ G+VKEILGT S+GCTV+G+ P +
Sbjct: 105 KKVKNIKHNGNLKIEQVYSIARAMKEKSRAKEFRGTVKEILGTCNSIGCTVDGKKPTTIQ 164
Query: 580 DDINSGALTIDE 615
+ I++G + + +
Sbjct: 165 EMIDNGDIDVPD 176
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 138 bits (335), Expect = 8e-32
Identities = 58/119 (48%), Positives = 87/119 (73%)
Frame = +3
Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 302
MPPK DPNE++++N++ GGE G S+LAPK+GPLGL+PK+VGD I + WKG+++ V
Sbjct: 1 MPPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMV 60
Query: 303 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLERCXRHCEXHEKQ 479
L QNR A + V+P+++AL+I+ + RDRKK KN+KHNGN++LE+ + E++
Sbjct: 61 NLRCQNRNADVTVIPTSSALLIKEIGGYERDRKKTKNVKHNGNLTLEQVIKVARAVEEK 119
Score = 57.6 bits (133), Expect = 2e-07
Identities = 25/59 (42%), Positives = 42/59 (71%)
Frame = +1
Query: 439 LKDVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTIDE 615
L+ V +A + +S+A+ +G+VK++LGTAQS+G TV+G+P +I INSG L +++
Sbjct: 106 LEQVIKVARAVEEKSLAKTFTGTVKQVLGTAQSLGATVDGQPVKAIIGKINSGELKVEK 164
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 120 bits (289), Expect = 3e-26
Identities = 64/126 (50%), Positives = 87/126 (69%), Gaps = 7/126 (5%)
Frame = +3
Query: 138 DPNEIKIVNLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 314
DP + K + L+ VGGEV GAT LA ++GPLGLS K VG+DI KAT+D+K LK+ VQL +
Sbjct: 8 DP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAI 64
Query: 315 QNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGN------ISLERCXRHCEXHEK 476
++R+A + V PS A LII++LKEPPRDRKK+KNI HNG+ + + R R +
Sbjct: 65 KDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIARSSRSYSN 124
Query: 477 QINGPV 494
++G V
Sbjct: 125 SLSGTV 130
Score = 52.4 bits (120), Expect = 9e-06
Identities = 24/60 (40%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = +1
Query: 439 LKDVXGIAXIMRN-RSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTIDE 615
+ +V IA I R+ RS + LSG+VKE+LGT +S+GC V+G+ P ++ +I++G + + +
Sbjct: 106 MTEVVDIARIARSSRSYSNSLSGTVKEVLGTCKSIGCKVDGKCPKEVTREIDAGEIKLPD 165
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 117 bits (281), Expect = 3e-25
Identities = 59/99 (59%), Positives = 67/99 (67%)
Frame = -1
Query: 433 MLPLCLIFFCFLRSRGGSLRALMIRAAAEGTTAIWACLF*TVSCTVILRPFQSLVALAMS 254
MLPLCL F F S GGS +A+M + A+GTT ACLF + TV L P SLVALA+S
Sbjct: 1 MLPLCLTFLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAIS 60
Query: 253 SPTFLGDRPRGPILGAKDDVAPTSPPTHRKFTILISFGS 137
SPTF GD+P GPI GAK APTSPPT K+ L SFGS
Sbjct: 61 SPTFFGDKPNGPIFGAKAAEAPTSPPTALKYKYLTSFGS 99
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 101 bits (243), Expect = 1e-20
Identities = 61/103 (59%), Positives = 67/103 (65%)
Frame = +3
Query: 129 PKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQL 308
PKF P EIK+ LRC G EV A S+LAPKI PLGLSPK KG
Sbjct: 131 PKFGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPK-------------KG------- 170
Query: 309 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNIS 437
QAQI VVPSA+ALII+ALKEP RDRKKQKNIKH+GNI+
Sbjct: 171 -----QAQIEVVPSASALIIKALKEPARDRKKQKNIKHSGNIT 208
Score = 75.4 bits (177), Expect = 1e-12
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = +1
Query: 445 DVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 603
++ IA MR+RS+ R LSG++KE+LGTAQS+GC V+GR PH +IDDINSGA+
Sbjct: 211 EIVNIARQMRHRSLDRELSGTIKELLGTAQSLGCNVDGRHPHKIIDDINSGAV 263
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 100 bits (240), Expect = 3e-20
Identities = 45/107 (42%), Positives = 72/107 (67%)
Frame = +3
Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 302
MPP+ DPN ++ LR GG + A ++L PKIGP GL PK VG+ I +AT +KG+++ V
Sbjct: 1 MPPRADPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGYKGIRVKV 60
Query: 303 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLE 443
++ +NRQ ++VVP+A++L+++AL E PR K + + H G + +
Sbjct: 61 RIVSKNRQPTVSVVPTASSLLVKALGEGPRTIPKGQPLLHTGTVKFD 107
Score = 39.9 bits (89), Expect = 0.051
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +1
Query: 424 TATSPLKDVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGR----PPHDLIDDIN 591
T T V IA +R S A +G+V E+LG+A+SVGC VE + P ++ + +
Sbjct: 101 TGTVKFDTVLDIAKELRANSFALKYAGTVLEVLGSARSVGCKVEYKGTVYSPAEITEMVK 160
Query: 592 SGALTIDE 615
+G + I E
Sbjct: 161 AGDIEIPE 168
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 98.3 bits (234), Expect = 1e-19
Identities = 51/106 (48%), Positives = 68/106 (64%)
Frame = -3
Query: 440 KGDVAVVFDIFLLFTVTGRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVTCGLG 261
KGDV+ V +FLL +V+ L+G DD+G R + L LSVL+ Q HSD +TLP+T LG
Sbjct: 44 KGDVSTVLYVFLLLSVSWWFLEGFDDQGRGRRYHLNLSLSVLDRQFHSDPQTLPITSCLG 103
Query: 260 NVITHLFRRQTKRTDFRGQR*CGTDFPADTSQIHDFNFIWVKLRGH 123
+VI HLF RQT+ + GQ GTD P Q+HDF+ + V+L H
Sbjct: 104 DVIAHLFWRQTQGANLGGQGRRGTDVPTGAPQVHDFDLVGVELGWH 149
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 86.6 bits (205), Expect = 4e-16
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = +1
Query: 439 LKDVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTIDE 615
L DV +A +MR RSMAR+LSG+VKEILGT QSVGCTV+G PHD+ID INSG + I++
Sbjct: 76 LDDVTNVAKVMRPRSMARHLSGTVKEILGTCQSVGCTVDGMAPHDVIDKINSGEIEIED 134
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +3
Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 233
MPPKF+ NEI+ V LRC GGEVGAT+SLAPKIGPLGL
Sbjct: 1 MPPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 85.0 bits (201), Expect = 1e-15
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = +3
Query: 156 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLT 311
IV +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLT 84
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 83.0 bits (196), Expect = 5e-15
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 400 KSRKISNTTATSPLKDVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLI 579
K +K + ++ IA MR+RS+AR LSG++KEILGTAQSVGC V+GR PHD+I
Sbjct: 183 KKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDII 242
Query: 580 DDINSGAL 603
DDINSGA+
Sbjct: 243 DDINSGAV 250
Score = 46.4 bits (105), Expect = 6e-04
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +3
Query: 372 ALKEPPRDRKKQKNIKHNGNISLE 443
A KEPPRDRKKQKNIKH+GNI+ +
Sbjct: 174 AKKEPPRDRKKQKNIKHSGNITFD 197
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 81.8 bits (193), Expect = 1e-14
Identities = 43/109 (39%), Positives = 66/109 (60%)
Frame = -3
Query: 443 FKGDVAVVFDIFLLFTVTGRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVTCGL 264
F+ V VFD+ +L +V+ L+ D++ NN LSVL+ QL+S+L+TL + GL
Sbjct: 74 FQLQVTTVFDVLVLLSVSWWFLQSGDNQRGSGWNNRSSSLSVLDLQLNSNLDTLEILGGL 133
Query: 263 GNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQIHDFNFIWVKLRGHFV 117
G++ T+L QT+ T+ Q T+F D+SQ+ +FIW+KL HFV
Sbjct: 134 GDIFTNLLWGQTQWTNLWSQSSGSTNFTTDSSQVQVLDFIWIKLWRHFV 182
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 77.8 bits (183), Expect = 2e-13
Identities = 34/77 (44%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = +3
Query: 153 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKAT-SDWKGLKITVQLTVQNRQA 329
K+V ++ GG+V + S LA KIGP GLSPKK+G+D AK T +W G+ +T++LT+ + A
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNA 66
Query: 330 QIAVVPSAAALIIRALK 380
+ +VPS ++L+ R ++
Sbjct: 67 YLKIVPSVSSLLKREMQ 83
>UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal
protein L12; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L12 - Mus musculus
Length = 142
Score = 74.9 bits (176), Expect = 1e-12
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +1
Query: 469 MRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 603
MR+RS+AR LSG++KEILGT+QSVGC V+G PHD+IDDINSGA+
Sbjct: 93 MRHRSLARELSGTIKEILGTSQSVGCNVDGCHPHDIIDDINSGAV 137
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 53.6 bits (123), Expect = 4e-06
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -2
Query: 285 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 184
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15;
Archaea|Rep: 50S ribosomal protein L11P - Sulfolobus
acidocaldarius
Length = 170
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/53 (39%), Positives = 36/53 (67%)
Frame = +1
Query: 439 LKDVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSG 597
L+ + IA + + A+ L+ ++K +LGTA+S+G TVEG+ P D+I +I+ G
Sbjct: 100 LEQIADIAIKKKPQLSAKTLTAAIKSLLGTARSIGITVEGKDPKDVIKEIDQG 152
Score = 40.3 bits (90), Expect = 0.038
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Frame = +3
Query: 153 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLK--ITVQLTVQNRQ 326
K + + GG L P + LGL+ ++V I T+ +KG+ +T+++ ++
Sbjct: 4 KTIKIMVEGGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQFKGMSVPVTIEIDSSTKK 63
Query: 327 AQIAV-VPSAAALIIRAL--KEPPRDRKKQKNIKHNGNISLER 446
I V VP+ +L+++A+ +EP D +K GN+ LE+
Sbjct: 64 YDIKVGVPTTTSLLLKAINAQEPSGDPAHKK----IGNLDLEQ 102
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 47.6 bits (108), Expect = 3e-04
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Frame = +3
Query: 153 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQ 326
++V + GG A L P IGPLG++ +V +I + T D++G+++ V++ V + R+
Sbjct: 4 EVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRK 63
Query: 327 AQIAV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLER 446
+I V +P ALI + L + + + GN++LE+
Sbjct: 64 FEIEVGIPPTTALIKKELGIETAAHEPRHEVV--GNLTLEQ 102
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = +1
Query: 439 LKDVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSG 597
L+ V IA + ++ ++ L +VKE+LGT S+G TVEG+ P ++ +I++G
Sbjct: 100 LEQVIKIAKMKKDAMLSYTLKNAVKEVLGTCGSMGVTVEGKDPKEVQKEIDAG 152
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 46.0 bits (104), Expect = 8e-04
Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Frame = +3
Query: 153 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQ 326
++V + GG+ A L P IGPLG++ +V I T D++G+ + V++ V R
Sbjct: 4 QVVEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIVDTDKRT 63
Query: 327 AQIAV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLER 446
++ V +P A+ALI + + ++ + + GNI++E+
Sbjct: 64 FEVEVGIPPASALIKKEIGIEKGSQEPKHQVA--GNITMEQ 102
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +1
Query: 439 LKDVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSG 597
++ + IA + ++ +A L + KE++GT SVG +VEG P + I++G
Sbjct: 100 MEQIVKIAKMKQDAMLAYNLKNASKEVVGTCVSVGISVEGMTPSEAQKAIDAG 152
>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L11P -
Thermoplasma volcanium
Length = 158
Score = 44.0 bits (99), Expect = 0.003
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Frame = +3
Query: 177 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV---QNRQAQIAV-V 344
GG+ + P +GPLGL+ +V +I + T +++G+++ V +TV + ++ +I V V
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTVIDPETKKYEITVGV 70
Query: 345 PSAAALIIRALKEPPRDRKKQKNIKHNGNISLER 446
P +AL+ + L KK++ + GN +LE+
Sbjct: 71 PPTSALLKKELGLEKGASKKKEAVA--GNATLEQ 102
Score = 39.9 bits (89), Expect = 0.051
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +1
Query: 403 SRKISNTTATSPLKDVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLID 582
S+K + L+ + +A +A+ L +V E+LGT ++G VEG+ P ++
Sbjct: 88 SKKKEAVAGNATLEQIKNVAIKKMPSMLAKDLKSAVLEVLGTCVAMGINVEGKDPKEVQK 147
Query: 583 DINSGALTIDE 615
I SG + I++
Sbjct: 148 LIKSGQIKIEQ 158
>UniRef50_A3H6X0 Cluster: Ribosomal protein L11; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L11 -
Caldivirga maquilingensis IC-167
Length = 169
Score = 39.5 bits (88), Expect = 0.067
Identities = 16/55 (29%), Positives = 33/55 (60%)
Frame = +1
Query: 436 PLKDVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGA 600
PL+ + +A I ++ ++K+++ T +S+G TV G+ P ++I +I+ GA
Sbjct: 100 PLEKLAEVALIKIEELGSKSFKSALKQVVSTCRSIGLTVNGKDPKEVIKEIDQGA 154
>UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 260
Score = 37.5 bits (83), Expect = 0.27
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Frame = +3
Query: 159 VNLRCVGGEVGATSSLAPKIGPLGL-----SPKKVGDD-----IAKATSDWKGLKITVQL 308
V L C GGEVG+ S A + P + K VG+ +A W+ +
Sbjct: 98 VPLPCTGGEVGSKSEPAAAVAPAVIVDVKEEEKSVGNGGGGGGAQEAARWWRAGGADGGV 157
Query: 309 TVQNRQ-AQIAVVPSAAALIIRALKEPPRDRK 401
TVQ R+ A++AV P A A +RAL+ PPR K
Sbjct: 158 TVQPRERARVAVQP-ADARRLRALRAPPRQGK 188
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 36.7 bits (81), Expect = 0.47
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = -3
Query: 434 DVAVVFDIFLLFTVTGRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVT 273
++++ + +F LF T + + +D C G S++ L +++ +HS + T+P T
Sbjct: 288 ELSLYYKLFTLFKTTPKSEEKTDTMDCINGIRSFMMLQIISHHVHSAIRTIPTT 341
>UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L11P -
Nanoarchaeum equitans
Length = 160
Score = 36.3 bits (80), Expect = 0.62
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +1
Query: 406 RKISNTTATSPLKDVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDD 585
R + +KDV IA + L +VK +LGTA++ G VE + P ++ +
Sbjct: 89 RTVHEWVGNVSMKDVVEIAKKKIDSMPTSSLKAAVKSVLGTARATGIKVENKDPKEVTKE 148
Query: 586 INSG 597
++ G
Sbjct: 149 VDEG 152
>UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4;
Sophophora|Rep: CG31374-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 935
Score = 33.9 bits (74), Expect = 3.3
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 234 SPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 413
SP ++ DDI K D + K + L ++NR+AQ A I E R++ ++KN
Sbjct: 536 SPDEL-DDIDKIRDDLQSTKQMLALELRNREAQDRENKKLLAKIRTLETELEREKSREKN 594
Query: 414 IKHNGNI 434
+++ N+
Sbjct: 595 LEYGSNV 601
>UniRef50_A0FZB1 Cluster: Putative uncharacterized protein; n=2;
Proteobacteria|Rep: Putative uncharacterized protein -
Burkholderia phymatum STM815
Length = 280
Score = 33.5 bits (73), Expect = 4.4
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 155 FNFIWVKLRGHFVDYLVQLYT-IITLNPNG*VWIPQGLPPERSETLAAHVEK 3
F + ++GH ++Y Y+ ++ +NP W+P+G P S+ L + E+
Sbjct: 156 FEACFEAVKGHKLEYAPPRYSDLVLMNPASYAWVPEGTPGVSSKWLGSFTER 207
>UniRef50_O70561 Cluster: Small proline-rich protein 2J; n=2; Mus
musculus|Rep: Small proline-rich protein 2J - Mus
musculus (Mouse)
Length = 109
Score = 33.1 bits (72), Expect = 5.8
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -1
Query: 559 CPPQYIQLTVLCQE--SLLLSQKGTGPLICFS*XSQCR-XHLSREMLPLC 419
CPP+ Q VLCQ SL+L Q P+ C S S H SR L LC
Sbjct: 18 CPPRSAQSPVLCQSAPSLVLLQSAQSPIHCQSALSHAHLSHASRNAL-LC 66
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,342,490
Number of Sequences: 1657284
Number of extensions: 13271531
Number of successful extensions: 34596
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 33540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34580
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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